RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 PPP4R2Q9NY27 417 aa24.43■■□□□ 1.5
SSC5D-201ENST00000389623 KDM2AQ9Y2K7 1162 aa24.42■■□□□ 1.5
SSC5D-201ENST00000389623 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.5
SSC5D-201ENST00000389623 WRNQ14191 1432 aaPredicted RBP eCLIP24.34■■□□□ 1.49
SSC5D-201ENST00000389623 SIN3AQ96ST3 1273 aa24.34■■□□□ 1.49
SSC5D-201ENST00000389623 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
SSC5D-201ENST00000389623 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
SSC5D-201ENST00000389623 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
SSC5D-201ENST00000389623 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
SSC5D-201ENST00000389623 NOP58Q9Y2X3 529 aaKnown RBP24.31■■□□□ 1.48
SSC5D-201ENST00000389623 RBM19Q9Y4C8 960 aaKnown RBP24.29■■□□□ 1.48
SSC5D-201ENST00000389623 BECN1Q14457 450 aa24.28■■□□□ 1.48
SSC5D-201ENST00000389623 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
SSC5D-201ENST00000389623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.48
SSC5D-201ENST00000389623 SENP3-EIF4A1A0A087X0R7 540 aa24.27■■□□□ 1.48
SSC5D-201ENST00000389623 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
SSC5D-201ENST00000389623 CCER2I3L3R5 266 aa24.21■■□□□ 1.47
SSC5D-201ENST00000389623 LAS1LQ9Y4W2 734 aaKnown RBP24.19■■□□□ 1.46
SSC5D-201ENST00000389623 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
SSC5D-201ENST00000389623 TIMELESSQ9UNS1 1208 aa24.18■■□□□ 1.46
SSC5D-201ENST00000389623 CCNB3Q8WWL7 1395 aa24.17■■□□□ 1.46
SSC5D-201ENST00000389623 ERICH6BQ5W0A0 696 aa24.16■■□□□ 1.46
SSC5D-201ENST00000389623 TSHZ2Q9NRE2 1034 aa24.15■■□□□ 1.46
SSC5D-201ENST00000389623 RTN4Q9NQC3 1192 aaKnown RBP24.14■■□□□ 1.46
SSC5D-201ENST00000389623 TRIM44Q96DX7 344 aaPredicted RBP24.14■■□□□ 1.45
SSC5D-201ENST00000389623 DEKP35659 375 aaKnown RBP24.12■■□□□ 1.45
SSC5D-201ENST00000389623 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
SSC5D-201ENST00000389623 SOGA1O94964 1423 aa24.06■■□□□ 1.44
SSC5D-201ENST00000389623 CARD11Q9BXL7 1154 aa24.05■■□□□ 1.44
SSC5D-201ENST00000389623 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
SSC5D-201ENST00000389623 MYH16Q9H6N6 1097 aa24.03■■□□□ 1.44
SSC5D-201ENST00000389623 GOLGA6L22H0YM25 854 aa24.02■■□□□ 1.44
SSC5D-201ENST00000389623 VPS8Q8N3P4 1428 aa24.01■■□□□ 1.43
SSC5D-201ENST00000389623 RGS3P49796 1198 aa24■■□□□ 1.43
SSC5D-201ENST00000389623 STAG3Q9UJ98 1225 aa23.99■■□□□ 1.43
SSC5D-201ENST00000389623 KNSTRNQ9Y448 316 aa23.98■■□□□ 1.43
SSC5D-201ENST00000389623 CDCA8Q53HL2 280 aa23.93■■□□□ 1.42
SSC5D-201ENST00000389623 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
SSC5D-201ENST00000389623 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
SSC5D-201ENST00000389623 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
SSC5D-201ENST00000389623 NAP1L5Q96NT1 182 aaPredicted RBP23.89■■□□□ 1.41
SSC5D-201ENST00000389623 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
SSC5D-201ENST00000389623 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
SSC5D-201ENST00000389623 PLEKHD1A6NEE1 506 aa23.87■■□□□ 1.41
SSC5D-201ENST00000389623 HSPA5P11021 654 aaKnown RBP23.86■■□□□ 1.41
SSC5D-201ENST00000389623 NCLP19338 710 aaKnown RBP23.86■■□□□ 1.41
SSC5D-201ENST00000389623 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
SSC5D-201ENST00000389623 CFAP53Q96M91 514 aa23.85■■□□□ 1.41
SSC5D-201ENST00000389623 BAZ1BQ9UIG0 1483 aaKnown RBP23.84■■□□□ 1.41
SSC5D-201ENST00000389623 FTSJ3Q8IY81 847 aaKnown RBP23.84■■□□□ 1.41
SSC5D-201ENST00000389623 ESF1Q9H501 851 aaKnown RBP23.84■■□□□ 1.41
SSC5D-201ENST00000389623 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.41
SSC5D-201ENST00000389623 NEUROD2Q15784 382 aa23.82■■□□□ 1.4
SSC5D-201ENST00000389623 RAB3GAP2Q9H2M9 1393 aa23.8■■□□□ 1.4
SSC5D-201ENST00000389623 FRAT1Q92837 279 aaPredicted RBP23.79■■□□□ 1.4
SSC5D-201ENST00000389623 NACADO15069 1562 aa23.79■■□□□ 1.4
SSC5D-201ENST00000389623 CC2D1BQ5T0F9 858 aaKnown RBP23.78■■□□□ 1.4
SSC5D-201ENST00000389623 PTMAP06454 111 aaKnown RBP23.78■■□□□ 1.4
SSC5D-201ENST00000389623 PPP1R15AO75807 674 aaPredicted RBP23.78■■□□□ 1.4
SSC5D-201ENST00000389623 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
SSC5D-201ENST00000389623 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
SSC5D-201ENST00000389623 TNNT2P45379 298 aaPredicted RBP23.73■■□□□ 1.39
SSC5D-201ENST00000389623 TCERG1O14776 1098 aaKnown RBP23.72■■□□□ 1.39
SSC5D-201ENST00000389623 DNTTIP2Q5QJE6 756 aaKnown RBP23.71■■□□□ 1.39
SSC5D-201ENST00000389623 L1TD1Q5T7N2 865 aaKnown RBP23.7■■□□□ 1.38
SSC5D-201ENST00000389623 IPO9Q96P70 1041 aaKnown RBP23.69■■□□□ 1.38
SSC5D-201ENST00000389623 CARMIL1Q5VZK9 1371 aa23.69■■□□□ 1.38
SSC5D-201ENST00000389623 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
SSC5D-201ENST00000389623 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
SSC5D-201ENST00000389623 RCAN3Q9UKA8 241 aa23.68■■□□□ 1.38
SSC5D-201ENST00000389623 KCNH8Q96L42 1107 aa23.66■■□□□ 1.38
SSC5D-201ENST00000389623 CASC1Q6TDU7 716 aa23.66■■□□□ 1.38
SSC5D-201ENST00000389623 MS4A1P11836 297 aa23.65■■□□□ 1.38
SSC5D-201ENST00000389623 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
SSC5D-201ENST00000389623 TMF1P82094 1093 aa23.65■■□□□ 1.38
SSC5D-201ENST00000389623 MAPK8IP3Q9UPT6 1336 aa23.64■■□□□ 1.37
SSC5D-201ENST00000389623 ARHGAP35Q9NRY4 1499 aa23.63■■□□□ 1.37
SSC5D-201ENST00000389623 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
SSC5D-201ENST00000389623 NUDCQ9Y266 331 aa23.62■■□□□ 1.37
SSC5D-201ENST00000389623 HSCBQ8IWL3 235 aa23.6■■□□□ 1.37
SSC5D-201ENST00000389623 DHX57Q6P158 1386 aaKnown RBP23.6■■□□□ 1.37
SSC5D-201ENST00000389623 CUX2O14529 1486 aa23.58■■□□□ 1.37
SSC5D-201ENST00000389623 CHMP4BQ9H444 224 aaKnown RBP23.58■■□□□ 1.36
SSC5D-201ENST00000389623 FOXD1Q16676 465 aa23.57■■□□□ 1.36
SSC5D-201ENST00000389623 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
SSC5D-201ENST00000389623 KTN1Q86UP2 1357 aaKnown RBP23.55■■□□□ 1.36
SSC5D-201ENST00000389623 RALBP1Q15311 655 aa23.53■■□□□ 1.36
SSC5D-201ENST00000389623 MPHOSPH9Q99550 1183 aa23.53■■□□□ 1.36
SSC5D-201ENST00000389623 TPRNQ4KMQ1 711 aa23.51■■□□□ 1.35
SSC5D-201ENST00000389623 SPRYD3Q8NCJ5 442 aa23.51■■□□□ 1.35
SSC5D-201ENST00000389623 PKD2Q13563 968 aa23.51■■□□□ 1.35
SSC5D-201ENST00000389623 PLCB2Q00722 1185 aa23.49■■□□□ 1.35
SSC5D-201ENST00000389623 SLKQ9H2G2 1235 aaPredicted RBP23.49■■□□□ 1.35
SSC5D-201ENST00000389623 U2SURPO15042 1029 aaKnown RBP23.48■■□□□ 1.35
SSC5D-201ENST00000389623 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
SSC5D-201ENST00000389623 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
SSC5D-201ENST00000389623 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.48■■□□□ 1.35
SSC5D-201ENST00000389623 MSNP26038 577 aaKnown RBP23.47■■□□□ 1.35
SSC5D-201ENST00000389623 PNNQ9H307 717 aaKnown RBP23.47■■□□□ 1.35
SSC5D-201ENST00000389623 ZRSR1Q15695 479 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms