RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PLCB2Q00722 1185 aa7.76□□□□□ -1.17
RFX3-204ENST00000382004 SENP3Q9H4L4 574 aaPredicted RBP7.76□□□□□ -1.17
RFX3-204ENST00000382004 C14orf37Q86TY3 774 aa7.76□□□□□ -1.17
RFX3-204ENST00000382004 DDRGK1Q96HY6 314 aa7.75□□□□□ -1.17
RFX3-204ENST00000382004 RTN4Q9NQC3 1192 aaKnown RBP7.75□□□□□ -1.17
RFX3-204ENST00000382004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.74□□□□□ -1.177e-6■□□□□ 10.8
RFX3-204ENST00000382004 ANP32EQ9BTT0 268 aa7.74□□□□□ -1.17
RFX3-204ENST00000382004 KDM2AQ9Y2K7 1162 aa7.72□□□□□ -1.17
RFX3-204ENST00000382004 CLSTN1O94985 981 aa7.71□□□□□ -1.17
RFX3-204ENST00000382004 MRS2Q9HD23 443 aa7.71□□□□□ -1.17
RFX3-204ENST00000382004 CASC1Q6TDU7 716 aa7.7□□□□□ -1.18
RFX3-204ENST00000382004 GOLGA6L6A8MZA4 724 aa7.69□□□□□ -1.18
RFX3-204ENST00000382004 ERICH6BQ5W0A0 696 aa7.69□□□□□ -1.18
RFX3-204ENST00000382004 NAP1L2Q9ULW6 460 aaPredicted RBP7.68□□□□□ -1.18
RFX3-204ENST00000382004 HAP1P54257 671 aaPredicted RBP7.68□□□□□ -1.18
RFX3-204ENST00000382004 NPHP1O15259 732 aa7.68□□□□□ -1.18
RFX3-204ENST00000382004 PABPN1Q86U42 306 aaKnown RBP eCLIP7.68□□□□□ -1.18
RFX3-204ENST00000382004 SENP3-EIF4A1A0A087X0R7 540 aa7.67□□□□□ -1.18
RFX3-204ENST00000382004 LAS1LQ9Y4W2 734 aaKnown RBP7.66□□□□□ -1.18
RFX3-204ENST00000382004 FGD1P98174 961 aa7.66□□□□□ -1.18
RFX3-204ENST00000382004 CHIC2Q9UKJ5 165 aa7.65□□□□□ -1.18
RFX3-204ENST00000382004 NPM1P06748 294 aaKnown RBP eCLIP7.65□□□□□ -1.18
RFX3-204ENST00000382004 NRDCO43847 1150 aa7.65□□□□□ -1.19
RFX3-204ENST00000382004 HIRIP3Q9BW71 556 aaPredicted RBP7.64□□□□□ -1.19
RFX3-204ENST00000382004 PRM3Q9NNZ6 103 aa7.64□□□□□ -1.19
RFX3-204ENST00000382004 FTSJ3Q8IY81 847 aaKnown RBP7.64□□□□□ -1.19
RFX3-204ENST00000382004 ARID4BQ4LE39 1312 aaPredicted RBP7.64□□□□□ -1.19
RFX3-204ENST00000382004 CHAF1AQ13111 956 aaPredicted RBP7.64□□□□□ -1.19
RFX3-204ENST00000382004 PPM1GO15355 546 aaPredicted RBP7.63□□□□□ -1.19
RFX3-204ENST00000382004 HSP90AB1P08238 724 aaKnown RBP7.63□□□□□ -1.19
RFX3-204ENST00000382004 DRC7Q8IY82 874 aa7.62□□□□□ -1.19
RFX3-204ENST00000382004 KCNJ4P48050 445 aa7.62□□□□□ -1.19
RFX3-204ENST00000382004 OS9Q13438 667 aaPredicted RBP7.61□□□□□ -1.19
RFX3-204ENST00000382004 GOLGA2Q08379 1002 aa7.61□□□□□ -1.19
RFX3-204ENST00000382004 ARID3AQ99856 593 aa7.61□□□□□ -1.19
RFX3-204ENST00000382004 ISY1Q9ULR0 285 aaKnown RBP7.61□□□□□ -1.19
RFX3-204ENST00000382004 PPP1R15AO75807 674 aaPredicted RBP7.61□□□□□ -1.19
RFX3-204ENST00000382004 GOLGA6L4A6NEF3 574 aa7.61□□□□□ -1.19
RFX3-204ENST00000382004 NOC3LQ8WTT2 800 aaKnown RBP7.6□□□□□ -1.19
RFX3-204ENST00000382004 PNNQ9H307 717 aaKnown RBP7.6□□□□□ -1.19
RFX3-204ENST00000382004 MSNP26038 577 aaKnown RBP7.6□□□□□ -1.19
RFX3-204ENST00000382004 RGS3P49796 1198 aa7.59□□□□□ -1.19
RFX3-204ENST00000382004 NEUROD2Q15784 382 aa7.59□□□□□ -1.2
RFX3-204ENST00000382004 PDE4CQ08493 712 aa7.58□□□□□ -1.2
RFX3-204ENST00000382004 L1TD1Q5T7N2 865 aaKnown RBP7.58□□□□□ -1.2
RFX3-204ENST00000382004 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
RFX3-204ENST00000382004 LMOD2Q6P5Q4 547 aa7.57□□□□□ -1.2
RFX3-204ENST00000382004 CFAP53Q96M91 514 aa7.57□□□□□ -1.2
RFX3-204ENST00000382004 SPRYD3Q8NCJ5 442 aa7.57□□□□□ -1.2
RFX3-204ENST00000382004 MIER1Q8N108 512 aa7.57□□□□□ -1.2
RFX3-204ENST00000382004 TNNT3P45378 269 aaPredicted RBP7.56□□□□□ -1.2
RFX3-204ENST00000382004 FRAT1Q92837 279 aaPredicted RBP7.56□□□□□ -1.2
RFX3-204ENST00000382004 SUPT16HQ9Y5B9 1047 aaKnown RBP7.55□□□□□ -1.2
RFX3-204ENST00000382004 TSPY4P0CV99 314 aa7.55□□□□□ -1.2
RFX3-204ENST00000382004 TSPY10P0CW01 314 aa7.55□□□□□ -1.2
RFX3-204ENST00000382004 GNL2Q13823 731 aaKnown RBP7.55□□□□□ -1.2
RFX3-204ENST00000382004 NOP58Q9Y2X3 529 aaKnown RBP7.54□□□□□ -1.2
RFX3-204ENST00000382004 A0A0U1RQG5 324 aaPredicted RBP7.54□□□□□ -1.2
RFX3-204ENST00000382004 EIF4G2P78344 907 aaKnown RBP eCLIP7.54□□□□□ -1.21e-9■■■■□ 22.4
RFX3-204ENST00000382004 CSRNP3Q8WYN3 585 aa7.54□□□□□ -1.2
RFX3-204ENST00000382004 MAPK8IP3Q9UPT6 1336 aa7.54□□□□□ -1.2
RFX3-204ENST00000382004 HSCBQ8IWL3 235 aa7.54□□□□□ -1.2
RFX3-204ENST00000382004 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
RFX3-204ENST00000382004 KNSTRNQ9Y448 316 aa7.52□□□□□ -1.21
RFX3-204ENST00000382004 ANO8Q9HCE9 1232 aaPredicted RBP7.52□□□□□ -1.21
RFX3-204ENST00000382004 MCCP23508 829 aa7.5□□□□□ -1.21
RFX3-204ENST00000382004 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
RFX3-204ENST00000382004 GOLGA6L1Q8N7Z2 621 aa7.49□□□□□ -1.21
RFX3-204ENST00000382004 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.49□□□□□ -1.21
RFX3-204ENST00000382004 RRP7BPQ9NSQ0 103 aa7.49□□□□□ -1.21
RFX3-204ENST00000382004 U2SURPO15042 1029 aaKnown RBP7.49□□□□□ -1.21
RFX3-204ENST00000382004 NUDCQ9Y266 331 aa7.48□□□□□ -1.21
RFX3-204ENST00000382004 DEKP35659 375 aaKnown RBP7.48□□□□□ -1.21
RFX3-204ENST00000382004 CHMP4BQ9H444 224 aaKnown RBP7.48□□□□□ -1.21
RFX3-204ENST00000382004 GZF1Q9H116 711 aaPredicted RBP7.47□□□□□ -1.21
RFX3-204ENST00000382004 CREBRFQ8IUR6 639 aa7.47□□□□□ -1.21
RFX3-204ENST00000382004 APBB1O00213 710 aa7.47□□□□□ -1.21
RFX3-204ENST00000382004 KCNH8Q96L42 1107 aa7.47□□□□□ -1.21
RFX3-204ENST00000382004 SOX12O15370 315 aa7.46□□□□□ -1.21
RFX3-204ENST00000382004 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.21
RFX3-204ENST00000382004 PPP4R2Q9NY27 417 aa7.46□□□□□ -1.22
RFX3-204ENST00000382004 POGKQ9P215 609 aa7.46□□□□□ -1.22
RFX3-204ENST00000382004 CDCA8Q53HL2 280 aa7.46□□□□□ -1.22
RFX3-204ENST00000382004 CC2D1BQ5T0F9 858 aaKnown RBP7.46□□□□□ -1.22
RFX3-204ENST00000382004 ABCC9O60706 1549 aa7.46□□□□□ -1.22
RFX3-204ENST00000382004 MTUS2Q5JR59 1369 aa7.45□□□□□ -1.22
RFX3-204ENST00000382004 MS4A1P11836 297 aa7.45□□□□□ -1.22
RFX3-204ENST00000382004 KIAA1211Q6ZU35 1233 aa7.45□□□□□ -1.22
RFX3-204ENST00000382004 PATL2C9JE40 543 aaKnown RBP7.45□□□□□ -1.22
RFX3-204ENST00000382004 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
RFX3-204ENST00000382004 TPM4P67936 248 aa7.44□□□□□ -1.22
RFX3-204ENST00000382004 CEP89Q96ST8 783 aa7.44□□□□□ -1.22
RFX3-204ENST00000382004 CARD11Q9BXL7 1154 aa7.43□□□□□ -1.22
RFX3-204ENST00000382004 WWC1Q8IX03 1113 aa7.43□□□□□ -1.22
RFX3-204ENST00000382004 CALRP27797 417 aaKnown RBP7.42□□□□□ -1.22
RFX3-204ENST00000382004 SETQ01105 290 aaPredicted RBP7.42□□□□□ -1.22
RFX3-204ENST00000382004 RASSF8Q8NHQ8 419 aa7.42□□□□□ -1.22
RFX3-204ENST00000382004 ZNF330Q9Y3S2 320 aaPredicted RBP7.42□□□□□ -1.22
RFX3-204ENST00000382004 GBP4Q96PP9 640 aa7.42□□□□□ -1.22
RFX3-204ENST00000382004 HTATSF1O43719 755 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms