RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 A0A0U1RQG5 324 aaPredicted RBP7.93□□□□□ -1.14
RFC1-202ENST00000381897 SUPT16HQ9Y5B9 1047 aaKnown RBP7.93□□□□□ -1.14
RFC1-202ENST00000381897 PPM1GO15355 546 aaPredicted RBP7.92□□□□□ -1.14
RFC1-202ENST00000381897 FBXO3Q9UK99 471 aa7.92□□□□□ -1.14
RFC1-202ENST00000381897 WDR70Q9NW82 654 aa7.92□□□□□ -1.14
RFC1-202ENST00000381897 FOXD4L1Q9NU39 408 aa7.91□□□□□ -1.14
RFC1-202ENST00000381897 PLEKHG5O94827 1062 aa7.91□□□□□ -1.14
RFC1-202ENST00000381897 SPRYD3Q8NCJ5 442 aa7.9□□□□□ -1.15
RFC1-202ENST00000381897 PABPN1Q86U42 306 aaKnown RBP eCLIP7.89□□□□□ -1.157e-7■□□□□ 10.4
RFC1-202ENST00000381897 PLCD3Q8N3E9 789 aa7.89□□□□□ -1.15
RFC1-202ENST00000381897 ECM2O94769 699 aaPredicted RBP7.88□□□□□ -1.15
RFC1-202ENST00000381897 CHGAP10645 457 aaKnown RBP7.86□□□□□ -1.15
RFC1-202ENST00000381897 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
RFC1-202ENST00000381897 TSHZ2Q9NRE2 1034 aa7.86□□□□□ -1.15
RFC1-202ENST00000381897 RSF1Q96T23 1441 aaPredicted RBP7.86□□□□□ -1.15
RFC1-202ENST00000381897 NACADO15069 1562 aa7.86□□□□□ -1.15
RFC1-202ENST00000381897 EEA1Q15075 1411 aa7.85□□□□□ -1.15
RFC1-202ENST00000381897 WRNQ14191 1432 aaPredicted RBP eCLIP7.84□□□□□ -1.15
RFC1-202ENST00000381897 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
RFC1-202ENST00000381897 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
RFC1-202ENST00000381897 ANP32CO43423 234 aa7.83□□□□□ -1.16
RFC1-202ENST00000381897 TNIKQ9UKE5 1360 aa7.82□□□□□ -1.16
RFC1-202ENST00000381897 LMOD2Q6P5Q4 547 aa7.82□□□□□ -1.16
RFC1-202ENST00000381897 PIAS4Q8N2W9 510 aaPredicted RBP7.82□□□□□ -1.16
RFC1-202ENST00000381897 KRI1Q8N9T8 703 aaKnown RBP7.81□□□□□ -1.16
RFC1-202ENST00000381897 CECR2Q9BXF3 1484 aa7.79□□□□□ -1.16
RFC1-202ENST00000381897 RAD21O60216 631 aa7.79□□□□□ -1.16
RFC1-202ENST00000381897 LAS1LQ9Y4W2 734 aaKnown RBP7.79□□□□□ -1.16
RFC1-202ENST00000381897 TMEM132AQ24JP5 1023 aa7.78□□□□□ -1.16
RFC1-202ENST00000381897 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
RFC1-202ENST00000381897 GOLGA3Q08378 1498 aa7.77□□□□□ -1.17
RFC1-202ENST00000381897 FBXW7Q969H0 707 aa7.77□□□□□ -1.17
RFC1-202ENST00000381897 RBM19Q9Y4C8 960 aaKnown RBP7.77□□□□□ -1.17
RFC1-202ENST00000381897 ANP32AP39687 249 aaKnown RBP7.76□□□□□ -1.17
RFC1-202ENST00000381897 ERICH6BQ5W0A0 696 aa7.74□□□□□ -1.17
RFC1-202ENST00000381897 NPM3O75607 178 aaKnown RBP7.73□□□□□ -1.17
RFC1-202ENST00000381897 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
RFC1-202ENST00000381897 KCTD17Q8N5Z5 321 aa7.7□□□□□ -1.18
RFC1-202ENST00000381897 CLIP1P30622 1438 aa7.7□□□□□ -1.18
RFC1-202ENST00000381897 PSMD1Q99460 953 aa7.7□□□□□ -1.18
RFC1-202ENST00000381897 FBLN2P98095 1184 aa7.69□□□□□ -1.18
RFC1-202ENST00000381897 DEKP35659 375 aaKnown RBP7.69□□□□□ -1.18
RFC1-202ENST00000381897 CCER2I3L3R5 266 aa7.69□□□□□ -1.18
RFC1-202ENST00000381897 CEP164Q9UPV0 1460 aa7.68□□□□□ -1.18
RFC1-202ENST00000381897 NPM1P06748 294 aaKnown RBP eCLIP7.68□□□□□ -1.18
RFC1-202ENST00000381897 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
RFC1-202ENST00000381897 MROH2BQ7Z745 1585 aa7.67□□□□□ -1.18
RFC1-202ENST00000381897 ITGAEP38570 1179 aa7.67□□□□□ -1.18
RFC1-202ENST00000381897 ZBTB47Q9UFB7 747 aaPredicted RBP7.66□□□□□ -1.18
RFC1-202ENST00000381897 NOP58Q9Y2X3 529 aaKnown RBP7.66□□□□□ -1.18
RFC1-202ENST00000381897 DDX10Q13206 875 aaKnown RBP7.66□□□□□ -1.18
RFC1-202ENST00000381897 APBB1O00213 710 aa7.65□□□□□ -1.18
RFC1-202ENST00000381897 TMCO4Q5TGY1 634 aa7.65□□□□□ -1.19
RFC1-202ENST00000381897 PPP4R2Q9NY27 417 aa7.65□□□□□ -1.19
RFC1-202ENST00000381897 WIZO95785 1651 aa7.64□□□□□ -1.19
RFC1-202ENST00000381897 VPS8Q8N3P4 1428 aa7.64□□□□□ -1.19
RFC1-202ENST00000381897 CNGB1Q14028 1251 aaPredicted RBP7.64□□□□□ -1.19
RFC1-202ENST00000381897 HNRNPUQ00839 825 aaKnown RBP eCLIP7.63□□□□□ -1.19
RFC1-202ENST00000381897 NEFMP07197 916 aa7.63□□□□□ -1.19
RFC1-202ENST00000381897 TRIM52Q96A61 297 aa7.63□□□□□ -1.19
RFC1-202ENST00000381897 RSPH6AQ9H0K4 717 aa7.62□□□□□ -1.19
RFC1-202ENST00000381897 ABCC8Q09428 1581 aa7.61□□□□□ -1.19
RFC1-202ENST00000381897 PDE4CQ08493 712 aa7.61□□□□□ -1.19
RFC1-202ENST00000381897 TONSLQ96HA7 1378 aa7.59□□□□□ -1.19
RFC1-202ENST00000381897 DHX57Q6P158 1386 aaKnown RBP7.59□□□□□ -1.2
RFC1-202ENST00000381897 ARID3CA6NKF2 412 aa7.58□□□□□ -1.2
RFC1-202ENST00000381897 TRHP20396 242 aaPredicted RBP7.58□□□□□ -1.2
RFC1-202ENST00000381897 TMX4Q9H1E5 349 aaPredicted RBP7.58□□□□□ -1.2
RFC1-202ENST00000381897 BAZ1AQ9NRL2 1556 aaPredicted RBP7.58□□□□□ -1.2
RFC1-202ENST00000381897 BAZ1BQ9UIG0 1483 aaKnown RBP7.57□□□□□ -1.2
RFC1-202ENST00000381897 FAM50AQ14320 339 aaKnown RBP7.57□□□□□ -1.2
RFC1-202ENST00000381897 SOGA1O94964 1423 aa7.57□□□□□ -1.2
RFC1-202ENST00000381897 E9PSI1 815 aa7.56□□□□□ -1.2
RFC1-202ENST00000381897 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
RFC1-202ENST00000381897 CCDC136Q96JN2 1154 aa7.56□□□□□ -1.2
RFC1-202ENST00000381897 NAP1L5Q96NT1 182 aaPredicted RBP7.56□□□□□ -1.2
RFC1-202ENST00000381897 CCDC88BA6NC98 1476 aa7.55□□□□□ -1.2
RFC1-202ENST00000381897 ESF1Q9H501 851 aaKnown RBP7.55□□□□□ -1.2
RFC1-202ENST00000381897 HMGB1P1B2RPK0 211 aaPredicted RBP7.54□□□□□ -1.2
RFC1-202ENST00000381897 CCNB3Q8WWL7 1395 aa7.54□□□□□ -1.2
RFC1-202ENST00000381897 NCLP19338 710 aaKnown RBP7.53□□□□□ -1.2
RFC1-202ENST00000381897 STK11IPQ8N1F8 1099 aa7.53□□□□□ -1.2
RFC1-202ENST00000381897 BBXQ8WY36 941 aaPredicted RBP7.53□□□□□ -1.2
RFC1-202ENST00000381897 RUSC2Q8N2Y8 1516 aa7.53□□□□□ -1.2
RFC1-202ENST00000381897 IRX6P78412 446 aaPredicted RBP7.52□□□□□ -1.21
RFC1-202ENST00000381897 TOP2AP11388 1531 aaKnown RBP7.52□□□□□ -1.21
RFC1-202ENST00000381897 ERCC6Q03468 1493 aa7.52□□□□□ -1.21
RFC1-202ENST00000381897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.52□□□□□ -1.218e-7■■■□□ 16.6
RFC1-202ENST00000381897 IL27Q8NEV9 243 aa7.51□□□□□ -1.21
RFC1-202ENST00000381897 IPO9Q96P70 1041 aaKnown RBP7.51□□□□□ -1.21
RFC1-202ENST00000381897 BRD2P25440 801 aaKnown RBP7.51□□□□□ -1.21
RFC1-202ENST00000381897 SETD5Q9C0A6 1442 aa7.49□□□□□ -1.21
RFC1-202ENST00000381897 KIF21BO75037 1637 aa7.49□□□□□ -1.21
RFC1-202ENST00000381897 PPP6R1Q9UPN7 881 aa7.49□□□□□ -1.21
RFC1-202ENST00000381897 P3H3Q8IVL6 736 aa7.48□□□□□ -1.21
RFC1-202ENST00000381897 MRS2Q9HD23 443 aa7.48□□□□□ -1.21
RFC1-202ENST00000381897 VASPP50552 380 aaPredicted RBP7.48□□□□□ -1.21
RFC1-202ENST00000381897 NOL8Q76FK4 1167 aaKnown RBP7.48□□□□□ -1.21
RFC1-202ENST00000381897 CALRP27797 417 aaKnown RBP7.47□□□□□ -1.21
RFC1-202ENST00000381897 FAM9BQ8IZU0 186 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms