RNA–Protein interactions for RNA: ENST00000380918.7

SREK1-203, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,433 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-203ENST00000380918 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
SREK1-203ENST00000380918 MYO15BQ96JP2 1530 aa9.62□□□□□ -0.87
SREK1-203ENST00000380918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.6□□□□□ -0.87
SREK1-203ENST00000380918 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
SREK1-203ENST00000380918 PDIA4P13667 645 aaKnown RBP9.58□□□□□ -0.88
SREK1-203ENST00000380918 SLC24A3Q9HC58 644 aa9.58□□□□□ -0.88
SREK1-203ENST00000380918 SHROOM4Q9ULL8 1493 aa9.57□□□□□ -0.88
SREK1-203ENST00000380918 SAMD1Q6SPF0 538 aaPredicted RBP9.56□□□□□ -0.88
SREK1-203ENST00000380918 CDK11BP21127 795 aaKnown RBP9.56□□□□□ -0.88
SREK1-203ENST00000380918 NKX1-1Q15270 411 aaPredicted RBP9.56□□□□□ -0.88
SREK1-203ENST00000380918 CDK11AQ9UQ88 783 aaPredicted RBP9.56□□□□□ -0.88
SREK1-203ENST00000380918 APBB1O00213 710 aa9.54□□□□□ -0.88
SREK1-203ENST00000380918 SPOCK2Q92563 424 aa9.54□□□□□ -0.88
SREK1-203ENST00000380918 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
SREK1-203ENST00000380918 RAD21O60216 631 aa9.5□□□□□ -0.89
SREK1-203ENST00000380918 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
SREK1-203ENST00000380918 FOXD4L5Q5VV16 416 aaPredicted RBP9.49□□□□□ -0.89
SREK1-203ENST00000380918 FOXD4L4Q8WXT5 416 aaPredicted RBP9.49□□□□□ -0.89
SREK1-203ENST00000380918 DHX37Q8IY37 1157 aaKnown RBP9.48□□□□□ -0.89
SREK1-203ENST00000380918 MTMR7Q9Y216 660 aa9.48□□□□□ -0.89
SREK1-203ENST00000380918 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
SREK1-203ENST00000380918 GPBP1L1Q9HC44 474 aaPredicted RBP9.46□□□□□ -0.9
SREK1-203ENST00000380918 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
SREK1-203ENST00000380918 GTPBP6O43824 516 aaPredicted RBP9.44□□□□□ -0.9
SREK1-203ENST00000380918 RGS22Q8NE09 1264 aa9.44□□□□□ -0.9
SREK1-203ENST00000380918 RBM25P49756 843 aaKnown RBP9.43□□□□□ -0.9
SREK1-203ENST00000380918 HSP90B1P14625 803 aaKnown RBP9.42□□□□□ -0.9
SREK1-203ENST00000380918 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
SREK1-203ENST00000380918 IL27Q8NEV9 243 aa9.41□□□□□ -0.9
SREK1-203ENST00000380918 MKRN3Q13064 507 aaKnown RBP9.41□□□□□ -0.9
SREK1-203ENST00000380918 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
SREK1-203ENST00000380918 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
SREK1-203ENST00000380918 RNF25Q96BH1 459 aaPredicted RBP9.4□□□□□ -0.91
SREK1-203ENST00000380918 DCAF1Q9Y4B6 1507 aa9.39□□□□□ -0.91
SREK1-203ENST00000380918 AEBP1Q8IUX7 1158 aa9.39□□□□□ -0.91
SREK1-203ENST00000380918 CCDC180Q9P1Z9 1646 aa9.38□□□□□ -0.91
SREK1-203ENST00000380918 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
SREK1-203ENST00000380918 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
SREK1-203ENST00000380918 ACIN1Q9UKV3 1341 aaKnown RBP9.34□□□□□ -0.91
SREK1-203ENST00000380918 PUS7Q96PZ0 661 aaKnown RBP9.32□□□□□ -0.92
SREK1-203ENST00000380918 ZNF219Q9P2Y4 722 aaPredicted RBP9.32□□□□□ -0.92
SREK1-203ENST00000380918 NEUROD1Q13562 356 aa9.31□□□□□ -0.92
SREK1-203ENST00000380918 P3H3Q8IVL6 736 aa9.29□□□□□ -0.92
SREK1-203ENST00000380918 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.92
SREK1-203ENST00000380918 MFAP1P55081 439 aaKnown RBP9.27□□□□□ -0.92
SREK1-203ENST00000380918 HMGB1P09429 215 aaKnown RBP9.26□□□□□ -0.93
SREK1-203ENST00000380918 TMCO4Q5TGY1 634 aa9.24□□□□□ -0.93
SREK1-203ENST00000380918 CLUAP1Q96AJ1 413 aa9.24□□□□□ -0.93
SREK1-203ENST00000380918 USP35Q9P2H5 1018 aa9.24□□□□□ -0.93
SREK1-203ENST00000380918 CADPS2Q86UW7 1296 aa9.24□□□□□ -0.93
SREK1-203ENST00000380918 GZF1Q9H116 711 aaPredicted RBP9.23□□□□□ -0.93
SREK1-203ENST00000380918 SEMA3EO15041 775 aa9.23□□□□□ -0.93
SREK1-203ENST00000380918 BCL11AQ9H165 835 aa9.22□□□□□ -0.93
SREK1-203ENST00000380918 ZMYND10O75800 440 aa9.21□□□□□ -0.93
SREK1-203ENST00000380918 WDR70Q9NW82 654 aa9.21□□□□□ -0.93
SREK1-203ENST00000380918 POLR3GLQ9BT43 218 aa9.21□□□□□ -0.94
SREK1-203ENST00000380918 PLCD3Q8N3E9 789 aa9.19□□□□□ -0.94
SREK1-203ENST00000380918 KDM4CQ9H3R0 1056 aa9.19□□□□□ -0.94
SREK1-203ENST00000380918 FAM9AQ8IZU1 332 aaPredicted RBP9.18□□□□□ -0.94
SREK1-203ENST00000380918 POLA2Q14181 598 aa9.17□□□□□ -0.94
SREK1-203ENST00000380918 UBE2Q2Q8WVN8 375 aa9.17□□□□□ -0.94
SREK1-203ENST00000380918 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
SREK1-203ENST00000380918 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
SREK1-203ENST00000380918 CENPBP07199 599 aaPredicted RBP9.16□□□□□ -0.94
SREK1-203ENST00000380918 BRD2P25440 801 aaKnown RBP9.15□□□□□ -0.94
SREK1-203ENST00000380918 IRF5Q13568 498 aa9.15□□□□□ -0.94
SREK1-203ENST00000380918 FAM177A1Q8N128 213 aaPredicted RBP9.15□□□□□ -0.94
SREK1-203ENST00000380918 STK25O00506 426 aa9.14□□□□□ -0.95
SREK1-203ENST00000380918 RETREG2Q8NC44 543 aa9.14□□□□□ -0.95
SREK1-203ENST00000380918 U3KPZ7 1027 aaPredicted RBP9.12□□□□□ -0.95
SREK1-203ENST00000380918 FAM117AQ9C073 453 aa9.11□□□□□ -0.95
SREK1-203ENST00000380918 E9PSI1 815 aa9.11□□□□□ -0.95
SREK1-203ENST00000380918 TRAK2O60296 914 aa9.1□□□□□ -0.95
SREK1-203ENST00000380918 ZNF777Q9ULD5 760 aaPredicted RBP9.1□□□□□ -0.95
SREK1-203ENST00000380918 ONECUT3O60422 494 aaPredicted RBP9.08□□□□□ -0.96
SREK1-203ENST00000380918 MIER1Q8N108 512 aa9.07□□□□□ -0.96
SREK1-203ENST00000380918 TESPA1A2RU30 521 aaPredicted RBP9.06□□□□□ -0.96
SREK1-203ENST00000380918 DMRT2Q9Y5R5 561 aa9.06□□□□□ -0.96
SREK1-203ENST00000380918 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
SREK1-203ENST00000380918 BARGINQ6ZT62 677 aa9.04□□□□□ -0.96
SREK1-203ENST00000380918 CWC22Q9HCG8 908 aaKnown RBP9.04□□□□□ -0.96
SREK1-203ENST00000380918 ZNF316A6NFI3 1004 aaPredicted RBP9.03□□□□□ -0.96
SREK1-203ENST00000380918 PLEKHG3A1L390 1219 aa9.02□□□□□ -0.97
SREK1-203ENST00000380918 PPM1GO15355 546 aaPredicted RBP9.01□□□□□ -0.97
SREK1-203ENST00000380918 PDE4CQ08493 712 aa9□□□□□ -0.97
SREK1-203ENST00000380918 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
SREK1-203ENST00000380918 PDE4DQ08499 809 aa9□□□□□ -0.97
SREK1-203ENST00000380918 AK7Q96M32 723 aa9□□□□□ -0.97
SREK1-203ENST00000380918 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.99□□□□□ -0.97
SREK1-203ENST00000380918 RIOK3O14730 519 aaKnown RBP8.99□□□□□ -0.97
SREK1-203ENST00000380918 HNRNPUL2Q1KMD3 747 aaKnown RBP8.99□□□□□ -0.97
SREK1-203ENST00000380918 BCL11BQ9C0K0 894 aaPredicted RBP8.99□□□□□ -0.97
SREK1-203ENST00000380918 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.99□□□□□ -0.972e-8■■□□□ 13.9
SREK1-203ENST00000380918 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
SREK1-203ENST00000380918 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
SREK1-203ENST00000380918 STK24Q9Y6E0 443 aa8.97□□□□□ -0.97
SREK1-203ENST00000380918 IRX6P78412 446 aaPredicted RBP8.96□□□□□ -0.97
SREK1-203ENST00000380918 TRIM66O15016 1216 aa8.96□□□□□ -0.98
SREK1-203ENST00000380918 FLIIQ13045 1269 aa8.96□□□□□ -0.98
SREK1-203ENST00000380918 UNCXA6NJT0 531 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms