RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 DDX10Q13206 875 aaKnown RBP27.9■■■□□ 2.06
FOXC1-201ENST00000380874 FHOD3Q2V2M9 1422 aa27.9■■■□□ 2.06
FOXC1-201ENST00000380874 TDRD9Q8NDG6 1382 aaKnown RBP27.88■■■□□ 2.05
FOXC1-201ENST00000380874 MTUS2Q5JR59 1369 aa27.87■■■□□ 2.05
FOXC1-201ENST00000380874 FHAD1B1AJZ9 1412 aa27.86■■■□□ 2.05
FOXC1-201ENST00000380874 TRIM52Q96A61 297 aa27.85■■■□□ 2.05
FOXC1-201ENST00000380874 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
FOXC1-201ENST00000380874 NESP48681 1621 aa27.79■■■□□ 2.04
FOXC1-201ENST00000380874 RRBP1Q9P2E9 1410 aaKnown RBP27.78■■■□□ 2.04
FOXC1-201ENST00000380874 SETD5Q9C0A6 1442 aa27.78■■■□□ 2.04
FOXC1-201ENST00000380874 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
FOXC1-201ENST00000380874 PHLDB1Q86UU1 1377 aa27.75■■■□□ 2.03
FOXC1-201ENST00000380874 RRP7BPQ9NSQ0 103 aa27.69■■■□□ 2.02
FOXC1-201ENST00000380874 TONSLQ96HA7 1378 aa27.69■■■□□ 2.02
FOXC1-201ENST00000380874 BCANQ96GW7 911 aa27.68■■■□□ 2.02
FOXC1-201ENST00000380874 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
FOXC1-201ENST00000380874 FBLN2P98095 1184 aa27.65■■■□□ 2.02
FOXC1-201ENST00000380874 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
FOXC1-201ENST00000380874 ANP32CO43423 234 aa27.62■■■□□ 2.01
FOXC1-201ENST00000380874 CNGB1Q14028 1251 aaPredicted RBP27.59■■■□□ 2.01
FOXC1-201ENST00000380874 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
FOXC1-201ENST00000380874 NEFLP07196 543 aa27.59■■■□□ 2.01
FOXC1-201ENST00000380874 KCNH8Q96L42 1107 aa27.59■■■□□ 2.01
FOXC1-201ENST00000380874 TOPBP1Q92547 1522 aa27.56■■■□□ 2
FOXC1-201ENST00000380874 TIAM1Q13009 1591 aa27.56■■■□□ 2
FOXC1-201ENST00000380874 FMN1Q68DA7 1419 aa27.52■■■□□ 2
FOXC1-201ENST00000380874 POLR3GLQ9BT43 218 aa27.5■■□□□ 1.99
FOXC1-201ENST00000380874 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
FOXC1-201ENST00000380874 MYT1Q01538 1121 aa27.48■■□□□ 1.99
FOXC1-201ENST00000380874 ZNF777Q9ULD5 760 aaPredicted RBP27.45■■□□□ 1.98
FOXC1-201ENST00000380874 DNMBPQ6XZF7 1577 aa27.42■■□□□ 1.98
FOXC1-201ENST00000380874 PPP1R15AO75807 674 aaPredicted RBP27.42■■□□□ 1.98
FOXC1-201ENST00000380874 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
FOXC1-201ENST00000380874 PCF11O94913 1555 aaKnown RBP27.41■■□□□ 1.98
FOXC1-201ENST00000380874 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
FOXC1-201ENST00000380874 CASKIN1Q8WXD9 1431 aa27.39■■□□□ 1.97
FOXC1-201ENST00000380874 FKBP8Q14318 412 aa27.38■■□□□ 1.97
FOXC1-201ENST00000380874 SUPT16HQ9Y5B9 1047 aaKnown RBP27.38■■□□□ 1.97
FOXC1-201ENST00000380874 ZNF326Q5BKZ1 582 aaKnown RBP27.37■■□□□ 1.97
FOXC1-201ENST00000380874 FGD6Q6ZV73 1430 aa27.34■■□□□ 1.97
FOXC1-201ENST00000380874 FOXD1Q16676 465 aa27.33■■□□□ 1.97
FOXC1-201ENST00000380874 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
FOXC1-201ENST00000380874 TIMELESSQ9UNS1 1208 aa27.32■■□□□ 1.96
FOXC1-201ENST00000380874 CDK11AQ9UQ88 783 aaPredicted RBP27.29■■□□□ 1.96
FOXC1-201ENST00000380874 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
FOXC1-201ENST00000380874 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
FOXC1-201ENST00000380874 AQRO60306 1485 aaKnown RBP eCLIP27.26■■□□□ 1.95
FOXC1-201ENST00000380874 MAP3K1Q13233 1512 aa27.26■■□□□ 1.95
FOXC1-201ENST00000380874 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
FOXC1-201ENST00000380874 EFCAB5A4FU69 1503 aa27.22■■□□□ 1.95
FOXC1-201ENST00000380874 WDR97A6NE52 1622 aa27.22■■□□□ 1.95
FOXC1-201ENST00000380874 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
FOXC1-201ENST00000380874 HNRNPUQ00839 825 aaKnown RBP eCLIP27.22■■□□□ 1.95
FOXC1-201ENST00000380874 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
FOXC1-201ENST00000380874 NCOA2Q15596 1464 aa27.2■■□□□ 1.94
FOXC1-201ENST00000380874 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
FOXC1-201ENST00000380874 MYOM3Q5VTT5 1437 aa27.16■■□□□ 1.94
FOXC1-201ENST00000380874 EIF4G2P78344 907 aaKnown RBP eCLIP27.16■■□□□ 1.94
FOXC1-201ENST00000380874 MPHOSPH9Q99550 1183 aa27.12■■□□□ 1.93
FOXC1-201ENST00000380874 HSPA5P11021 654 aaKnown RBP27.1■■□□□ 1.93
FOXC1-201ENST00000380874 CFDP1Q9UEE9 299 aaPredicted RBP27.1■■□□□ 1.93
FOXC1-201ENST00000380874 CUL7Q14999 1698 aa27.1■■□□□ 1.93
FOXC1-201ENST00000380874 FAM9BQ8IZU0 186 aa27.09■■□□□ 1.93
FOXC1-201ENST00000380874 LAMC3Q9Y6N6 1575 aa27.08■■□□□ 1.93
FOXC1-201ENST00000380874 IRX6P78412 446 aaPredicted RBP27.07■■□□□ 1.92
FOXC1-201ENST00000380874 UACAQ9BZF9 1416 aa27.07■■□□□ 1.92
FOXC1-201ENST00000380874 PTPRKQ15262 1439 aa27.05■■□□□ 1.92
FOXC1-201ENST00000380874 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
FOXC1-201ENST00000380874 L3MBTL2Q969R5 705 aa27.04■■□□□ 1.92
FOXC1-201ENST00000380874 CCER2I3L3R5 266 aa27.01■■□□□ 1.91
FOXC1-201ENST00000380874 HFM1A2PYH4 1435 aa27.01■■□□□ 1.91
FOXC1-201ENST00000380874 ERCC6Q03468 1493 aa27.01■■□□□ 1.91
FOXC1-201ENST00000380874 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27■■□□□ 1.91
FOXC1-201ENST00000380874 NAIPQ13075 1403 aa26.99■■□□□ 1.91
FOXC1-201ENST00000380874 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
FOXC1-201ENST00000380874 MRS2Q9HD23 443 aa26.95■■□□□ 1.91
FOXC1-201ENST00000380874 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.9
FOXC1-201ENST00000380874 KDM2AQ9Y2K7 1162 aa26.94■■□□□ 1.9
FOXC1-201ENST00000380874 SENP3-EIF4A1A0A087X0R7 540 aa26.93■■□□□ 1.9
FOXC1-201ENST00000380874 CDK13Q14004 1512 aaKnown RBP26.93■■□□□ 1.9
FOXC1-201ENST00000380874 PLEKHD1A6NEE1 506 aa26.93■■□□□ 1.9
FOXC1-201ENST00000380874 CTTNBP2Q8WZ74 1663 aa26.92■■□□□ 1.9
FOXC1-201ENST00000380874 EHBP1L1Q8N3D4 1523 aa26.89■■□□□ 1.9
FOXC1-201ENST00000380874 GRIN2BQ13224 1484 aa26.88■■□□□ 1.89
FOXC1-201ENST00000380874 TSPY4P0CV99 314 aa26.87■■□□□ 1.89
FOXC1-201ENST00000380874 TSPY10P0CW01 314 aa26.87■■□□□ 1.89
FOXC1-201ENST00000380874 SUPT6HQ7KZ85 1726 aaKnown RBP26.86■■□□□ 1.89
FOXC1-201ENST00000380874 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
FOXC1-201ENST00000380874 TSHZ2Q9NRE2 1034 aa26.83■■□□□ 1.89
FOXC1-201ENST00000380874 MRC2Q9UBG0 1479 aa26.82■■□□□ 1.88
FOXC1-201ENST00000380874 JPH4Q96JJ6 628 aa26.82■■□□□ 1.88
FOXC1-201ENST00000380874 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
FOXC1-201ENST00000380874 PKD2Q13563 968 aa26.81■■□□□ 1.88
FOXC1-201ENST00000380874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.81■■□□□ 1.88
FOXC1-201ENST00000380874 PTPN23Q9H3S7 1636 aa26.81■■□□□ 1.88
FOXC1-201ENST00000380874 WASHC2AQ641Q2 1341 aa26.8■■□□□ 1.88
FOXC1-201ENST00000380874 IQGAP2Q13576 1575 aa26.79■■□□□ 1.88
FOXC1-201ENST00000380874 MYT1LQ9UL68 1186 aa26.77■■□□□ 1.88
FOXC1-201ENST00000380874 KIF21AQ7Z4S6 1674 aa26.77■■□□□ 1.88
FOXC1-201ENST00000380874 ABCA5Q8WWZ7 1642 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms