RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 PHLDB1Q86UU1 1377 aa22.34■■□□□ 1.17
RER1-203ENST00000378513 NESP48681 1621 aa22.33■■□□□ 1.16
RER1-203ENST00000378513 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
RER1-203ENST00000378513 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
RER1-203ENST00000378513 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
RER1-203ENST00000378513 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
RER1-203ENST00000378513 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
RER1-203ENST00000378513 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
RER1-203ENST00000378513 LRRC9Q6ZRR7 1453 aa22.22■■□□□ 1.15
RER1-203ENST00000378513 DDX10Q13206 875 aaKnown RBP22.21■■□□□ 1.15
RER1-203ENST00000378513 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
RER1-203ENST00000378513 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
RER1-203ENST00000378513 SETD5Q9C0A6 1442 aa22.18■■□□□ 1.14
RER1-203ENST00000378513 MAPKBP1O60336 1514 aa22.16■■□□□ 1.14
RER1-203ENST00000378513 PCF11O94913 1555 aaKnown RBP22.15■■□□□ 1.14
RER1-203ENST00000378513 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
RER1-203ENST00000378513 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
RER1-203ENST00000378513 PRDM2Q13029 1718 aa22.09■■□□□ 1.13
RER1-203ENST00000378513 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
RER1-203ENST00000378513 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
RER1-203ENST00000378513 SUPT16HQ9Y5B9 1047 aaKnown RBP22.05■■□□□ 1.12
RER1-203ENST00000378513 BCANQ96GW7 911 aa22.05■■□□□ 1.12
RER1-203ENST00000378513 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.12
RER1-203ENST00000378513 MTUS2Q5JR59 1369 aa22.01■■□□□ 1.11
RER1-203ENST00000378513 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
RER1-203ENST00000378513 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
RER1-203ENST00000378513 RRP7BPQ9NSQ0 103 aa21.96■■□□□ 1.11
RER1-203ENST00000378513 MAP3K1Q13233 1512 aa21.95■■□□□ 1.1
RER1-203ENST00000378513 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
RER1-203ENST00000378513 TRIM52Q96A61 297 aa21.94■■□□□ 1.1
RER1-203ENST00000378513 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
RER1-203ENST00000378513 CASKIN1Q8WXD9 1431 aa21.93■■□□□ 1.1
RER1-203ENST00000378513 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
RER1-203ENST00000378513 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
RER1-203ENST00000378513 FGD6Q6ZV73 1430 aa21.9■■□□□ 1.1
RER1-203ENST00000378513 CFAP43Q8NDM7 1665 aa21.89■■□□□ 1.09
RER1-203ENST00000378513 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
RER1-203ENST00000378513 FMN1Q68DA7 1419 aa21.85■■□□□ 1.09
RER1-203ENST00000378513 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
RER1-203ENST00000378513 FOXD1Q16676 465 aa21.84■■□□□ 1.09
RER1-203ENST00000378513 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
RER1-203ENST00000378513 SNAPC4Q5SXM2 1469 aa21.82■■□□□ 1.08
RER1-203ENST00000378513 FKBP8Q14318 412 aa21.81■■□□□ 1.08
RER1-203ENST00000378513 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
RER1-203ENST00000378513 AQRO60306 1485 aaKnown RBP eCLIP21.79■■□□□ 1.082e-6■■■□□ 15.2
RER1-203ENST00000378513 NCOA2Q15596 1464 aa21.79■■□□□ 1.08
RER1-203ENST00000378513 ANP32CO43423 234 aa21.77■■□□□ 1.08
RER1-203ENST00000378513 CTTNBP2Q8WZ74 1663 aa21.77■■□□□ 1.08
RER1-203ENST00000378513 CUL7Q14999 1698 aa21.75■■□□□ 1.07
RER1-203ENST00000378513 NAIPQ13075 1403 aa21.72■■□□□ 1.07
RER1-203ENST00000378513 CNGB1Q14028 1251 aaPredicted RBP21.72■■□□□ 1.07
RER1-203ENST00000378513 MYOM3Q5VTT5 1437 aa21.71■■□□□ 1.07
RER1-203ENST00000378513 LRRIQ1Q96JM4 1722 aa21.71■■□□□ 1.07
RER1-203ENST00000378513 TSHZ2Q9NRE2 1034 aa21.71■■□□□ 1.07
RER1-203ENST00000378513 PDS5BQ9NTI5 1447 aa21.7■■□□□ 1.06
RER1-203ENST00000378513 MAGI3Q5TCQ9 1506 aa21.69■■□□□ 1.06
RER1-203ENST00000378513 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
RER1-203ENST00000378513 GRIN2BQ13224 1484 aa21.67■■□□□ 1.06
RER1-203ENST00000378513 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
RER1-203ENST00000378513 TIMELESSQ9UNS1 1208 aa21.66■■□□□ 1.06
RER1-203ENST00000378513 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
RER1-203ENST00000378513 PTPN23Q9H3S7 1636 aa21.65■■□□□ 1.06
RER1-203ENST00000378513 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
RER1-203ENST00000378513 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
RER1-203ENST00000378513 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
RER1-203ENST00000378513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.64■■□□□ 1.054e-7■■■■□ 23.8
RER1-203ENST00000378513 KIF21AQ7Z4S6 1674 aa21.64■■□□□ 1.05
RER1-203ENST00000378513 IRX6P78412 446 aaPredicted RBP21.63■■□□□ 1.05
RER1-203ENST00000378513 HSPA5P11021 654 aaKnown RBP21.62■■□□□ 1.05
RER1-203ENST00000378513 SAMD9Q5K651 1589 aa21.61■■□□□ 1.05
RER1-203ENST00000378513 FBLN2P98095 1184 aa21.58■■□□□ 1.05
RER1-203ENST00000378513 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.04
RER1-203ENST00000378513 ANP32EQ9BTT0 268 aa21.58■■□□□ 1.04
RER1-203ENST00000378513 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
RER1-203ENST00000378513 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
RER1-203ENST00000378513 KDM6BO15054 1643 aa21.57■■□□□ 1.04
RER1-203ENST00000378513 SUPT6HQ7KZ85 1726 aaKnown RBP21.55■■□□□ 1.04
RER1-203ENST00000378513 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
RER1-203ENST00000378513 WASHC2AQ641Q2 1341 aa21.55■■□□□ 1.04
RER1-203ENST00000378513 NEFLP07196 543 aa21.55■■□□□ 1.04
RER1-203ENST00000378513 CCDC184Q52MB2 194 aa21.55■■□□□ 1.04
RER1-203ENST00000378513 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
RER1-203ENST00000378513 ZNF608Q9ULD9 1512 aaPredicted RBP21.53■■□□□ 1.04
RER1-203ENST00000378513 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
RER1-203ENST00000378513 EHBP1L1Q8N3D4 1523 aa21.53■■□□□ 1.04
RER1-203ENST00000378513 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
RER1-203ENST00000378513 UGGT2Q9NYU1 1516 aa21.52■■□□□ 1.04
RER1-203ENST00000378513 EPRSP07814 1512 aaKnown RBP21.52■■□□□ 1.04
RER1-203ENST00000378513 POLR3GLQ9BT43 218 aa21.52■■□□□ 1.04
RER1-203ENST00000378513 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
RER1-203ENST00000378513 DENND4BO75064 1496 aaPredicted RBP21.51■■□□□ 1.03
RER1-203ENST00000378513 TARBP1Q13395 1621 aaKnown RBP21.5■■□□□ 1.03
RER1-203ENST00000378513 THOC2Q8NI27 1593 aaKnown RBP21.49■■□□□ 1.03
RER1-203ENST00000378513 KDM5BQ9UGL1 1544 aa21.46■■□□□ 1.03
RER1-203ENST00000378513 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
RER1-203ENST00000378513 NBPF8Q3BBV2 869 aa21.46■■□□□ 1.03
RER1-203ENST00000378513 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
RER1-203ENST00000378513 BCL11AQ9H165 835 aa21.46■■□□□ 1.03
RER1-203ENST00000378513 IQGAP2Q13576 1575 aa21.45■■□□□ 1.02
RER1-203ENST00000378513 FAM9BQ8IZU0 186 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms