RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
CSNK1A1-202ENST00000377843 CFTRP13569 1480 aa22.04■■□□□ 1.12
CSNK1A1-202ENST00000377843 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
CSNK1A1-202ENST00000377843 CCER2I3L3R5 266 aa22.02■■□□□ 1.12
CSNK1A1-202ENST00000377843 HIRIP3Q9BW71 556 aaPredicted RBP22.02■■□□□ 1.12
CSNK1A1-202ENST00000377843 CDK11AQ9UQ88 783 aaPredicted RBP22.02■■□□□ 1.12
CSNK1A1-202ENST00000377843 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
CSNK1A1-202ENST00000377843 NESP48681 1621 aa22■■□□□ 1.11
CSNK1A1-202ENST00000377843 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
CSNK1A1-202ENST00000377843 ANO8Q9HCE9 1232 aaPredicted RBP21.97■■□□□ 1.11
CSNK1A1-202ENST00000377843 CCNB3Q8WWL7 1395 aa21.97■■□□□ 1.11
CSNK1A1-202ENST00000377843 SIN3AQ96ST3 1273 aa21.97■■□□□ 1.11
CSNK1A1-202ENST00000377843 MYT1LQ9UL68 1186 aa21.94■■□□□ 1.1
CSNK1A1-202ENST00000377843 ANP32CO43423 234 aa21.94■■□□□ 1.1
CSNK1A1-202ENST00000377843 CUX1P39880 1505 aa21.89■■□□□ 1.09
CSNK1A1-202ENST00000377843 TOP2BQ02880 1626 aa21.83■■□□□ 1.09
CSNK1A1-202ENST00000377843 NBR1Q14596 966 aa21.82■■□□□ 1.08
CSNK1A1-202ENST00000377843 HNRNPUQ00839 825 aaKnown RBP eCLIP21.81■■□□□ 1.08
CSNK1A1-202ENST00000377843 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
CSNK1A1-202ENST00000377843 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
CSNK1A1-202ENST00000377843 SALL2Q9Y467 1007 aaPredicted RBP21.78■■□□□ 1.08
CSNK1A1-202ENST00000377843 SETD5Q9C0A6 1442 aa21.78■■□□□ 1.08
CSNK1A1-202ENST00000377843 NOP58Q9Y2X3 529 aaKnown RBP21.76■■□□□ 1.07
CSNK1A1-202ENST00000377843 PRXQ9BXM0 1461 aa21.75■■□□□ 1.07
CSNK1A1-202ENST00000377843 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
CSNK1A1-202ENST00000377843 ERICH3Q5RHP9 1530 aa21.72■■□□□ 1.07
CSNK1A1-202ENST00000377843 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
CSNK1A1-202ENST00000377843 B4GALNT3Q6L9W6 998 aa21.71■■□□□ 1.07
CSNK1A1-202ENST00000377843 ERICH6BQ5W0A0 696 aa21.68■■□□□ 1.06
CSNK1A1-202ENST00000377843 TIMELESSQ9UNS1 1208 aa21.67■■□□□ 1.06
CSNK1A1-202ENST00000377843 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
CSNK1A1-202ENST00000377843 FGD5Q6ZNL6 1462 aa21.64■■□□□ 1.05
CSNK1A1-202ENST00000377843 IL27Q8NEV9 243 aa21.63■■□□□ 1.05
CSNK1A1-202ENST00000377843 CCDC136Q96JN2 1154 aa21.63■■□□□ 1.05
CSNK1A1-202ENST00000377843 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
CSNK1A1-202ENST00000377843 RAD54L2Q9Y4B4 1467 aa21.61■■□□□ 1.05
CSNK1A1-202ENST00000377843 PHLDB1Q86UU1 1377 aa21.59■■□□□ 1.05
CSNK1A1-202ENST00000377843 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
CSNK1A1-202ENST00000377843 FAM50AQ14320 339 aaKnown RBP21.56■■□□□ 1.04
CSNK1A1-202ENST00000377843 KIF27Q86VH2 1401 aa21.56■■□□□ 1.04
CSNK1A1-202ENST00000377843 LAMC3Q9Y6N6 1575 aa21.55■■□□□ 1.04
CSNK1A1-202ENST00000377843 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
CSNK1A1-202ENST00000377843 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
CSNK1A1-202ENST00000377843 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
CSNK1A1-202ENST00000377843 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
CSNK1A1-202ENST00000377843 TIAM1Q13009 1591 aa21.51■■□□□ 1.03
CSNK1A1-202ENST00000377843 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
CSNK1A1-202ENST00000377843 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
CSNK1A1-202ENST00000377843 IPO9Q96P70 1041 aaKnown RBP21.48■■□□□ 1.03
CSNK1A1-202ENST00000377843 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
CSNK1A1-202ENST00000377843 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.47■■□□□ 1.03
CSNK1A1-202ENST00000377843 LRRC9Q6ZRR7 1453 aa21.47■■□□□ 1.03
CSNK1A1-202ENST00000377843 IGF1RP08069 1367 aa21.46■■□□□ 1.03
CSNK1A1-202ENST00000377843 RTL5Q5HYW3 569 aaPredicted RBP21.46■■□□□ 1.03
CSNK1A1-202ENST00000377843 DNMBPQ6XZF7 1577 aa21.46■■□□□ 1.03
CSNK1A1-202ENST00000377843 WASHC2AQ641Q2 1341 aa21.46■■□□□ 1.03
CSNK1A1-202ENST00000377843 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
CSNK1A1-202ENST00000377843 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
CSNK1A1-202ENST00000377843 FAM9BQ8IZU0 186 aa21.41■■□□□ 1.02
CSNK1A1-202ENST00000377843 ANP32AP39687 249 aaKnown RBP21.41■■□□□ 1.02
CSNK1A1-202ENST00000377843 ZBTB47Q9UFB7 747 aaPredicted RBP21.4■■□□□ 1.02
CSNK1A1-202ENST00000377843 KDM5BQ9UGL1 1544 aa21.39■■□□□ 1.01
CSNK1A1-202ENST00000377843 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
CSNK1A1-202ENST00000377843 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
CSNK1A1-202ENST00000377843 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
CSNK1A1-202ENST00000377843 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
CSNK1A1-202ENST00000377843 AKNAQ7Z591 1439 aa21.33■■□□□ 1
CSNK1A1-202ENST00000377843 UBE2Q2Q8WVN8 375 aa21.31■■□□□ 1
CSNK1A1-202ENST00000377843 PRKRIP1Q9H875 184 aaPredicted RBP21.31■■□□□ 1
CSNK1A1-202ENST00000377843 MRS2Q9HD23 443 aa21.31■■□□□ 1
CSNK1A1-202ENST00000377843 NCOA2Q15596 1464 aa21.3■■□□□ 1
CSNK1A1-202ENST00000377843 CNTLNQ9NXG0 1405 aa21.3■■□□□ 1
CSNK1A1-202ENST00000377843 ABCA10Q8WWZ4 1543 aa21.29■■□□□ 1
CSNK1A1-202ENST00000377843 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
CSNK1A1-202ENST00000377843 P3H3Q8IVL6 736 aa21.28■■□□□ 1
CSNK1A1-202ENST00000377843 ERCC6Q03468 1493 aa21.28■■□□□ 1
CSNK1A1-202ENST00000377843 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
CSNK1A1-202ENST00000377843 LAS1LQ9Y4W2 734 aaKnown RBP21.25■□□□□ 0.99
CSNK1A1-202ENST00000377843 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.996e-10■■■■□ 22
CSNK1A1-202ENST00000377843 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
CSNK1A1-202ENST00000377843 NEFMP07197 916 aa21.23■□□□□ 0.99
CSNK1A1-202ENST00000377843 MRC2Q9UBG0 1479 aa21.22■□□□□ 0.99
CSNK1A1-202ENST00000377843 RNF123Q5XPI4 1314 aa21.22■□□□□ 0.99
CSNK1A1-202ENST00000377843 WASHC2CQ9Y4E1 1318 aa21.22■□□□□ 0.99
CSNK1A1-202ENST00000377843 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
CSNK1A1-202ENST00000377843 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
CSNK1A1-202ENST00000377843 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
CSNK1A1-202ENST00000377843 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
CSNK1A1-202ENST00000377843 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
CSNK1A1-202ENST00000377843 PCF11O94913 1555 aaKnown RBP21.19■□□□□ 0.98
CSNK1A1-202ENST00000377843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.19■□□□□ 0.98
CSNK1A1-202ENST00000377843 BRPF3Q9ULD4 1205 aa21.18■□□□□ 0.98
CSNK1A1-202ENST00000377843 GAPVD1Q14C86 1478 aa21.18■□□□□ 0.98
CSNK1A1-202ENST00000377843 EIF4G2P78344 907 aaKnown RBP eCLIP21.17■□□□□ 0.98
CSNK1A1-202ENST00000377843 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
CSNK1A1-202ENST00000377843 HFM1A2PYH4 1435 aa21.15■□□□□ 0.98
CSNK1A1-202ENST00000377843 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
CSNK1A1-202ENST00000377843 SENP3-EIF4A1A0A087X0R7 540 aa21.15■□□□□ 0.98
CSNK1A1-202ENST00000377843 NUDCQ9Y266 331 aa21.15■□□□□ 0.98
CSNK1A1-202ENST00000377843 NCOA1Q15788 1441 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms