RNA–Protein interactions for RNA: ENST00000376887.8

ABCC4-201, Transcript of ATP binding cassette subfamily C member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC4, Length 5,839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4-201ENST00000376887 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
ABCC4-201ENST00000376887 ANP32BQ92688 251 aaKnown RBP10.76□□□□□ -0.69
ABCC4-201ENST00000376887 CDK11BP21127 795 aaKnown RBP10.75□□□□□ -0.69
ABCC4-201ENST00000376887 CDK11AQ9UQ88 783 aaPredicted RBP10.75□□□□□ -0.69
ABCC4-201ENST00000376887 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
ABCC4-201ENST00000376887 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
ABCC4-201ENST00000376887 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
ABCC4-201ENST00000376887 KCNH8Q96L42 1107 aa10.75□□□□□ -0.69
ABCC4-201ENST00000376887 IRX6P78412 446 aaPredicted RBP10.74□□□□□ -0.69
ABCC4-201ENST00000376887 RAB3GAP2Q9H2M9 1393 aa10.72□□□□□ -0.69
ABCC4-201ENST00000376887 DHX57Q6P158 1386 aaKnown RBP10.72□□□□□ -0.69
ABCC4-201ENST00000376887 CANXP27824 592 aaKnown RBP10.71□□□□□ -0.69
ABCC4-201ENST00000376887 FAM9BQ8IZU0 186 aa10.71□□□□□ -0.69
ABCC4-201ENST00000376887 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
ABCC4-201ENST00000376887 KIF21BO75037 1637 aa10.68□□□□□ -0.7
ABCC4-201ENST00000376887 SUPT16HQ9Y5B9 1047 aaKnown RBP10.68□□□□□ -0.7
ABCC4-201ENST00000376887 FHOD3Q2V2M9 1422 aa10.67□□□□□ -0.7
ABCC4-201ENST00000376887 GLIPR1L2Q4G1C9 344 aa10.66□□□□□ -0.7
ABCC4-201ENST00000376887 FOXD1Q16676 465 aa10.66□□□□□ -0.7
ABCC4-201ENST00000376887 CADPSQ9ULU8 1353 aa10.66□□□□□ -0.7
ABCC4-201ENST00000376887 SETD5Q9C0A6 1442 aa10.65□□□□□ -0.71
ABCC4-201ENST00000376887 ARAP1Q96P48 1450 aa10.64□□□□□ -0.71
ABCC4-201ENST00000376887 IGF1RP08069 1367 aa10.64□□□□□ -0.71
ABCC4-201ENST00000376887 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
ABCC4-201ENST00000376887 SALL2Q9Y467 1007 aaPredicted RBP10.63□□□□□ -0.71
ABCC4-201ENST00000376887 KDM2AQ9Y2K7 1162 aa10.62□□□□□ -0.71
ABCC4-201ENST00000376887 FHAD1B1AJZ9 1412 aa10.62□□□□□ -0.71
ABCC4-201ENST00000376887 MRS2Q9HD23 443 aa10.61□□□□□ -0.71
ABCC4-201ENST00000376887 BCL11AQ9H165 835 aa10.6□□□□□ -0.71
ABCC4-201ENST00000376887 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.713e-9■■■■□ 25.2
ABCC4-201ENST00000376887 CHMP7Q8WUX9 453 aaPredicted RBP10.59□□□□□ -0.71
ABCC4-201ENST00000376887 PPP1R15AO75807 674 aaPredicted RBP10.58□□□□□ -0.72
ABCC4-201ENST00000376887 EIF4G1Q04637 1599 aaKnown RBP10.58□□□□□ -0.72
ABCC4-201ENST00000376887 RAD54L2Q9Y4B4 1467 aa10.58□□□□□ -0.72
ABCC4-201ENST00000376887 PHLDB1Q86UU1 1377 aa10.57□□□□□ -0.72
ABCC4-201ENST00000376887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.72
ABCC4-201ENST00000376887 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
ABCC4-201ENST00000376887 PRXQ9BXM0 1461 aa10.56□□□□□ -0.72
ABCC4-201ENST00000376887 ARHGAP35Q9NRY4 1499 aa10.56□□□□□ -0.72
ABCC4-201ENST00000376887 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
ABCC4-201ENST00000376887 HSP90AA1P07900 732 aaKnown RBP10.55□□□□□ -0.72
ABCC4-201ENST00000376887 CUX1P39880 1505 aa10.54□□□□□ -0.72
ABCC4-201ENST00000376887 UNC13AQ9UPW8 1703 aa10.54□□□□□ -0.72
ABCC4-201ENST00000376887 CFDP1Q9UEE9 299 aaPredicted RBP10.54□□□□□ -0.72
ABCC4-201ENST00000376887 FANCD2Q9BXW9 1451 aa10.53□□□□□ -0.72
ABCC4-201ENST00000376887 ANP32AP39687 249 aaKnown RBP10.53□□□□□ -0.72
ABCC4-201ENST00000376887 HSPA5P11021 654 aaKnown RBP10.52□□□□□ -0.73
ABCC4-201ENST00000376887 RGL3Q3MIN7 710 aa10.52□□□□□ -0.73
ABCC4-201ENST00000376887 DNAJC5BQ9UF47 199 aa10.52□□□□□ -0.73
ABCC4-201ENST00000376887 TOP2BQ02880 1626 aa10.51□□□□□ -0.73
ABCC4-201ENST00000376887 CFTRP13569 1480 aa10.51□□□□□ -0.73
ABCC4-201ENST00000376887 TSPY4P0CV99 314 aa10.51□□□□□ -0.73
ABCC4-201ENST00000376887 TSPY10P0CW01 314 aa10.51□□□□□ -0.73
ABCC4-201ENST00000376887 TMC1Q8TDI8 760 aa10.5□□□□□ -0.73
ABCC4-201ENST00000376887 UPF2Q9HAU5 1272 aaKnown RBP10.49□□□□□ -0.73
ABCC4-201ENST00000376887 EIF5BO60841 1220 aaKnown RBP10.48□□□□□ -0.73
ABCC4-201ENST00000376887 NESP48681 1621 aa10.48□□□□□ -0.73
ABCC4-201ENST00000376887 L3MBTL2Q969R5 705 aa10.48□□□□□ -0.73
ABCC4-201ENST00000376887 MPHOSPH9Q99550 1183 aa10.48□□□□□ -0.73
ABCC4-201ENST00000376887 FMN1Q68DA7 1419 aa10.48□□□□□ -0.73
ABCC4-201ENST00000376887 TIMELESSQ9UNS1 1208 aa10.47□□□□□ -0.73
ABCC4-201ENST00000376887 PLEKHD1A6NEE1 506 aa10.46□□□□□ -0.73
ABCC4-201ENST00000376887 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
ABCC4-201ENST00000376887 RRBP1Q9P2E9 1410 aaKnown RBP10.46□□□□□ -0.73
ABCC4-201ENST00000376887 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.73
ABCC4-201ENST00000376887 LRRC9Q6ZRR7 1453 aa10.46□□□□□ -0.74
ABCC4-201ENST00000376887 ERICH3Q5RHP9 1530 aa10.45□□□□□ -0.74
ABCC4-201ENST00000376887 NPM2Q86SE8 214 aaKnown RBP10.45□□□□□ -0.74
ABCC4-201ENST00000376887 B4GALNT3Q6L9W6 998 aa10.44□□□□□ -0.74
ABCC4-201ENST00000376887 SENP3Q9H4L4 574 aaPredicted RBP10.43□□□□□ -0.74
ABCC4-201ENST00000376887 ZNF644Q9H582 1327 aaPredicted RBP10.43□□□□□ -0.74
ABCC4-201ENST00000376887 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
ABCC4-201ENST00000376887 CARD11Q9BXL7 1154 aa10.43□□□□□ -0.74
ABCC4-201ENST00000376887 CCDC136Q96JN2 1154 aa10.42□□□□□ -0.74
ABCC4-201ENST00000376887 PDS5BQ9NTI5 1447 aa10.42□□□□□ -0.74
ABCC4-201ENST00000376887 PKD2Q13563 968 aa10.42□□□□□ -0.74
ABCC4-201ENST00000376887 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
ABCC4-201ENST00000376887 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
ABCC4-201ENST00000376887 FGD6Q6ZV73 1430 aa10.4□□□□□ -0.75
ABCC4-201ENST00000376887 DCAF11Q8TEB1 546 aa10.39□□□□□ -0.75
ABCC4-201ENST00000376887 CHGAP10645 457 aaKnown RBP10.39□□□□□ -0.75
ABCC4-201ENST00000376887 RBM19Q9Y4C8 960 aaKnown RBP10.39□□□□□ -0.75
ABCC4-201ENST00000376887 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
ABCC4-201ENST00000376887 AQRO60306 1485 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■■■■ 29.5
ABCC4-201ENST00000376887 HMGXB3Q12766 1538 aa10.37□□□□□ -0.75
ABCC4-201ENST00000376887 NBR1Q14596 966 aa10.36□□□□□ -0.75
ABCC4-201ENST00000376887 TNNT2P45379 298 aaPredicted RBP10.36□□□□□ -0.75
ABCC4-201ENST00000376887 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
ABCC4-201ENST00000376887 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
ABCC4-201ENST00000376887 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
ABCC4-201ENST00000376887 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
ABCC4-201ENST00000376887 TIAM1Q13009 1591 aa10.34□□□□□ -0.75
ABCC4-201ENST00000376887 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■■□ 22.4
ABCC4-201ENST00000376887 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
ABCC4-201ENST00000376887 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
ABCC4-201ENST00000376887 CC2D1BQ5T0F9 858 aaKnown RBP10.33□□□□□ -0.76
ABCC4-201ENST00000376887 TOPBP1Q92547 1522 aa10.33□□□□□ -0.76
ABCC4-201ENST00000376887 NCOA2Q15596 1464 aa10.32□□□□□ -0.76
ABCC4-201ENST00000376887 NUP155O75694 1391 aa10.32□□□□□ -0.76
ABCC4-201ENST00000376887 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms