RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
ABCF1-202ENST00000376545 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
ABCF1-202ENST00000376545 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
ABCF1-202ENST00000376545 PCF11O94913 1555 aaKnown RBP15.69■□□□□ 0.1
ABCF1-202ENST00000376545 EFCAB5A4FU69 1503 aa15.68■□□□□ 0.1
ABCF1-202ENST00000376545 CTTNBP2Q8WZ74 1663 aa15.68■□□□□ 0.1
ABCF1-202ENST00000376545 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
ABCF1-202ENST00000376545 MYT1Q01538 1121 aa15.67■□□□□ 0.1
ABCF1-202ENST00000376545 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
ABCF1-202ENST00000376545 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■■■■□ 24
ABCF1-202ENST00000376545 FYCO1Q9BQS8 1478 aa15.64■□□□□ 0.09
ABCF1-202ENST00000376545 RAD54L2Q9Y4B4 1467 aa15.64■□□□□ 0.09
ABCF1-202ENST00000376545 RAB3GAP2Q9H2M9 1393 aa15.63■□□□□ 0.09
ABCF1-202ENST00000376545 PHLDB1Q86UU1 1377 aa15.63■□□□□ 0.09
ABCF1-202ENST00000376545 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
ABCF1-202ENST00000376545 CASKIN1Q8WXD9 1431 aa15.61■□□□□ 0.09
ABCF1-202ENST00000376545 SETD5Q9C0A6 1442 aa15.61■□□□□ 0.09
ABCF1-202ENST00000376545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.61■□□□□ 0.09
ABCF1-202ENST00000376545 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
ABCF1-202ENST00000376545 NESP48681 1621 aa15.58■□□□□ 0.08
ABCF1-202ENST00000376545 SAMD9Q5K651 1589 aa15.56■□□□□ 0.08
ABCF1-202ENST00000376545 URB2Q14146 1524 aaKnown RBP15.56■□□□□ 0.08
ABCF1-202ENST00000376545 YTHDC1Q96MU7 727 aaKnown RBP15.56■□□□□ 0.08
ABCF1-202ENST00000376545 FHOD3Q2V2M9 1422 aa15.55■□□□□ 0.08
ABCF1-202ENST00000376545 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
ABCF1-202ENST00000376545 LRRIQ1Q96JM4 1722 aa15.52■□□□□ 0.08
ABCF1-202ENST00000376545 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
ABCF1-202ENST00000376545 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
ABCF1-202ENST00000376545 ITGAEP38570 1179 aa15.49■□□□□ 0.07
ABCF1-202ENST00000376545 KIF21AQ7Z4S6 1674 aa15.47■□□□□ 0.07
ABCF1-202ENST00000376545 TIMELESSQ9UNS1 1208 aa15.47■□□□□ 0.07
ABCF1-202ENST00000376545 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
ABCF1-202ENST00000376545 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
ABCF1-202ENST00000376545 FGD6Q6ZV73 1430 aa15.45■□□□□ 0.06
ABCF1-202ENST00000376545 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
ABCF1-202ENST00000376545 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
ABCF1-202ENST00000376545 FAM50AQ14320 339 aaKnown RBP15.42■□□□□ 0.06
ABCF1-202ENST00000376545 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
ABCF1-202ENST00000376545 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
ABCF1-202ENST00000376545 SUPT6HQ7KZ85 1726 aaKnown RBP15.39■□□□□ 0.05
ABCF1-202ENST00000376545 HFM1A2PYH4 1435 aa15.39■□□□□ 0.05
ABCF1-202ENST00000376545 PTPN23Q9H3S7 1636 aa15.39■□□□□ 0.05
ABCF1-202ENST00000376545 EHBP1L1Q8N3D4 1523 aa15.38■□□□□ 0.05
ABCF1-202ENST00000376545 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
ABCF1-202ENST00000376545 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
ABCF1-202ENST00000376545 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
ABCF1-202ENST00000376545 SIN3AQ96ST3 1273 aa15.37■□□□□ 0.05
ABCF1-202ENST00000376545 NCOA2Q15596 1464 aa15.36■□□□□ 0.05
ABCF1-202ENST00000376545 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
ABCF1-202ENST00000376545 MYOM3Q5VTT5 1437 aa15.35■□□□□ 0.05
ABCF1-202ENST00000376545 CCDC18Q5T9S5 1454 aa15.35■□□□□ 0.05
ABCF1-202ENST00000376545 UACAQ9BZF9 1416 aa15.34■□□□□ 0.05
ABCF1-202ENST00000376545 MTUS2Q5JR59 1369 aa15.33■□□□□ 0.05
ABCF1-202ENST00000376545 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.05
ABCF1-202ENST00000376545 ATP1B4Q9UN42 357 aaPredicted RBP15.33■□□□□ 0.05
ABCF1-202ENST00000376545 MAGI3Q5TCQ9 1506 aa15.32■□□□□ 0.04
ABCF1-202ENST00000376545 TCOF1Q13428 1488 aaKnown RBP15.32■□□□□ 0.04
ABCF1-202ENST00000376545 NAIPQ13075 1403 aa15.31■□□□□ 0.04
ABCF1-202ENST00000376545 GCC2Q8IWJ2 1684 aa15.3■□□□□ 0.04
ABCF1-202ENST00000376545 ADAMTS12P58397 1594 aa15.3■□□□□ 0.04
ABCF1-202ENST00000376545 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
ABCF1-202ENST00000376545 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
ABCF1-202ENST00000376545 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
ABCF1-202ENST00000376545 AKNAQ7Z591 1439 aa15.26■□□□□ 0.03
ABCF1-202ENST00000376545 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
ABCF1-202ENST00000376545 DNAJC5BQ9UF47 199 aa15.23■□□□□ 0.03
ABCF1-202ENST00000376545 WDR62O43379 1518 aa15.23■□□□□ 0.03
ABCF1-202ENST00000376545 EPRSP07814 1512 aaKnown RBP15.23■□□□□ 0.03
ABCF1-202ENST00000376545 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
ABCF1-202ENST00000376545 DENND4BO75064 1496 aaPredicted RBP15.21■□□□□ 0.03
ABCF1-202ENST00000376545 MIA2Q96PC5 1412 aa15.21■□□□□ 0.03
ABCF1-202ENST00000376545 DDX10Q13206 875 aaKnown RBP15.21■□□□□ 0.02
ABCF1-202ENST00000376545 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
ABCF1-202ENST00000376545 TONSLQ96HA7 1378 aa15.19■□□□□ 0.02
ABCF1-202ENST00000376545 CCER2I3L3R5 266 aa15.19■□□□□ 0.02
ABCF1-202ENST00000376545 KDM6BO15054 1643 aa15.16■□□□□ 0.02
ABCF1-202ENST00000376545 CDK13Q14004 1512 aaKnown RBP15.15■□□□□ 0.02
ABCF1-202ENST00000376545 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
ABCF1-202ENST00000376545 KIAA0556O60303 1618 aa15.14■□□□□ 0.01
ABCF1-202ENST00000376545 DISP1Q96F81 1524 aa15.12■□□□□ 0.01
ABCF1-202ENST00000376545 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
ABCF1-202ENST00000376545 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
ABCF1-202ENST00000376545 ROCK1Q13464 1354 aa15.1■□□□□ 0.01
ABCF1-202ENST00000376545 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
ABCF1-202ENST00000376545 RAPGEF6Q8TEU7 1601 aa15.08■□□□□ 0
ABCF1-202ENST00000376545 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0
ABCF1-202ENST00000376545 ANP32CO43423 234 aa15.08■□□□□ 0
ABCF1-202ENST00000376545 NUP153P49790 1475 aaKnown RBP15.07■□□□□ 0
ABCF1-202ENST00000376545 DAPK1P53355 1430 aa15.06■□□□□ 0
ABCF1-202ENST00000376545 RRP7BPQ9NSQ0 103 aa15.06■□□□□ 0
ABCF1-202ENST00000376545 EIF4G3O43432 1585 aaKnown RBP15.05■□□□□ -0
ABCF1-202ENST00000376545 GRIN2AQ12879 1464 aa15.05■□□□□ -0
ABCF1-202ENST00000376545 ABCC5O15440 1437 aa15.03■□□□□ -0
ABCF1-202ENST00000376545 ADCY10Q96PN6 1610 aa15.03■□□□□ -0
ABCF1-202ENST00000376545 MPHOSPH9Q99550 1183 aa15.03■□□□□ -0
ABCF1-202ENST00000376545 POLR1AO95602 1720 aaPredicted RBP15.02□□□□□ -0.01
ABCF1-202ENST00000376545 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
ABCF1-202ENST00000376545 RPRD2Q5VT52 1461 aaKnown RBP15.01□□□□□ -0.01
ABCF1-202ENST00000376545 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
ABCF1-202ENST00000376545 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms