RNA–Protein interactions for RNA: ENST00000376300.6

CCDC93-202, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC93, Length 6,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-202ENST00000376300 BICRAQ9NZM4 1560 aa10.27□□□□□ -0.77
CCDC93-202ENST00000376300 CARMIL1Q5VZK9 1371 aa10.27□□□□□ -0.77
CCDC93-202ENST00000376300 ZNF326Q5BKZ1 582 aaKnown RBP10.25□□□□□ -0.77
CCDC93-202ENST00000376300 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
CCDC93-202ENST00000376300 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
CCDC93-202ENST00000376300 AQRO60306 1485 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■□□□ 13.3
CCDC93-202ENST00000376300 AEBP2Q6ZN18 517 aaPredicted RBP10.23□□□□□ -0.77
CCDC93-202ENST00000376300 ACIN1Q9UKV3 1341 aaKnown RBP10.23□□□□□ -0.77
CCDC93-202ENST00000376300 NPM2Q86SE8 214 aaKnown RBP10.21□□□□□ -0.77
CCDC93-202ENST00000376300 MTUS2Q5JR59 1369 aa10.21□□□□□ -0.78
CCDC93-202ENST00000376300 NBR1Q14596 966 aa10.2□□□□□ -0.78
CCDC93-202ENST00000376300 BCL11AQ9H165 835 aa10.2□□□□□ -0.78
CCDC93-202ENST00000376300 RAD54L2Q9Y4B4 1467 aa10.19□□□□□ -0.78
CCDC93-202ENST00000376300 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
CCDC93-202ENST00000376300 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
CCDC93-202ENST00000376300 NEUROD1Q13562 356 aa10.17□□□□□ -0.78
CCDC93-202ENST00000376300 CFDP1Q9UEE9 299 aaPredicted RBP10.17□□□□□ -0.78
CCDC93-202ENST00000376300 PLEKHG5O94827 1062 aa10.16□□□□□ -0.78
CCDC93-202ENST00000376300 TOP2AP11388 1531 aaKnown RBP10.15□□□□□ -0.78
CCDC93-202ENST00000376300 SCAF1Q9H7N4 1312 aaKnown RBP10.15□□□□□ -0.79
CCDC93-202ENST00000376300 ARXQ96QS3 562 aa10.13□□□□□ -0.79
CCDC93-202ENST00000376300 CARMIL2Q6F5E8 1435 aa10.12□□□□□ -0.79
CCDC93-202ENST00000376300 GGT6Q6P531 493 aa10.12□□□□□ -0.79
CCDC93-202ENST00000376300 CLIP1P30622 1438 aa10.1□□□□□ -0.79
CCDC93-202ENST00000376300 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
CCDC93-202ENST00000376300 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
CCDC93-202ENST00000376300 FGD5Q6ZNL6 1462 aa10.08□□□□□ -0.8
CCDC93-202ENST00000376300 PTPRGP23470 1445 aa10.08□□□□□ -0.8
CCDC93-202ENST00000376300 FKBP8Q14318 412 aa10.06□□□□□ -0.8
CCDC93-202ENST00000376300 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
CCDC93-202ENST00000376300 MRC2Q9UBG0 1479 aa10.06□□□□□ -0.8
CCDC93-202ENST00000376300 ANP32AP39687 249 aaKnown RBP10.06□□□□□ -0.8
CCDC93-202ENST00000376300 GLIPR1L2Q4G1C9 344 aa10.06□□□□□ -0.8
CCDC93-202ENST00000376300 PPP1R15AO75807 674 aaPredicted RBP10.05□□□□□ -0.8
CCDC93-202ENST00000376300 CFTRP13569 1480 aa10.05□□□□□ -0.8
CCDC93-202ENST00000376300 RTN4Q9NQC3 1192 aaKnown RBP10.03□□□□□ -0.8
CCDC93-202ENST00000376300 EFCAB2Q5VUJ9 269 aa10.02□□□□□ -0.81
CCDC93-202ENST00000376300 RGL3Q3MIN7 710 aa10.01□□□□□ -0.81
CCDC93-202ENST00000376300 KDM2AQ9Y2K7 1162 aa10□□□□□ -0.81
CCDC93-202ENST00000376300 IGF1RP08069 1367 aa9.99□□□□□ -0.81
CCDC93-202ENST00000376300 EEA1Q15075 1411 aa9.99□□□□□ -0.81
CCDC93-202ENST00000376300 RUSC2Q8N2Y8 1516 aa9.99□□□□□ -0.81
CCDC93-202ENST00000376300 ANP32CO43423 234 aa9.98□□□□□ -0.81
CCDC93-202ENST00000376300 GOLGA3Q08378 1498 aa9.98□□□□□ -0.81
CCDC93-202ENST00000376300 HMGXB3Q12766 1538 aa9.97□□□□□ -0.81
CCDC93-202ENST00000376300 TOPBP1Q92547 1522 aa9.96□□□□□ -0.81
CCDC93-202ENST00000376300 HNRNPMP52272 730 aaKnown RBP eCLIP9.96□□□□□ -0.813e-7■■■□□ 16.9
CCDC93-202ENST00000376300 CCNB3Q8WWL7 1395 aa9.96□□□□□ -0.82
CCDC93-202ENST00000376300 FHOD3Q2V2M9 1422 aa9.95□□□□□ -0.82
CCDC93-202ENST00000376300 UNC13AQ9UPW8 1703 aa9.95□□□□□ -0.82
CCDC93-202ENST00000376300 POLA1P09884 1462 aaPredicted RBP9.95□□□□□ -0.82
CCDC93-202ENST00000376300 ZNF608Q9ULD9 1512 aaPredicted RBP9.95□□□□□ -0.82
CCDC93-202ENST00000376300 GRIN2BQ13224 1484 aa9.94□□□□□ -0.82
CCDC93-202ENST00000376300 KIF3BO15066 747 aa9.94□□□□□ -0.82
CCDC93-202ENST00000376300 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
CCDC93-202ENST00000376300 CEP162Q5TB80 1403 aa9.94□□□□□ -0.82
CCDC93-202ENST00000376300 IFT140Q96RY7 1462 aa9.93□□□□□ -0.82
CCDC93-202ENST00000376300 IRX6P78412 446 aaPredicted RBP9.93□□□□□ -0.82
CCDC93-202ENST00000376300 RAPGEF2Q9Y4G8 1499 aa9.93□□□□□ -0.82
CCDC93-202ENST00000376300 A0A0G2JS52 829 aa9.92□□□□□ -0.82
CCDC93-202ENST00000376300 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
CCDC93-202ENST00000376300 AMER1Q5JTC6 1135 aaPredicted RBP9.91□□□□□ -0.82
CCDC93-202ENST00000376300 SNAPC4Q5SXM2 1469 aa9.91□□□□□ -0.82
CCDC93-202ENST00000376300 CANXP27824 592 aaKnown RBP9.91□□□□□ -0.82
CCDC93-202ENST00000376300 SLC24A1O60721 1099 aa9.9□□□□□ -0.82
CCDC93-202ENST00000376300 DNAJC5Q9H3Z4 198 aa9.9□□□□□ -0.83
CCDC93-202ENST00000376300 KANK4Q5T7N3 995 aaPredicted RBP9.89□□□□□ -0.83
CCDC93-202ENST00000376300 RAPGEF3O95398 923 aa9.89□□□□□ -0.83
CCDC93-202ENST00000376300 FHAD1B1AJZ9 1412 aa9.88□□□□□ -0.83
CCDC93-202ENST00000376300 SPAG9O60271 1321 aaKnown RBP9.88□□□□□ -0.83
CCDC93-202ENST00000376300 LAMC3Q9Y6N6 1575 aa9.88□□□□□ -0.83
CCDC93-202ENST00000376300 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
CCDC93-202ENST00000376300 ZBTB7CA1YPR0 619 aa9.88□□□□□ -0.83
CCDC93-202ENST00000376300 ANP32EQ9BTT0 268 aa9.88□□□□□ -0.83
CCDC93-202ENST00000376300 AFAP1Q8N556 730 aa9.87□□□□□ -0.83
CCDC93-202ENST00000376300 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
CCDC93-202ENST00000376300 ZBTB47Q9UFB7 747 aaPredicted RBP9.87□□□□□ -0.83
CCDC93-202ENST00000376300 ANP32BQ92688 251 aaKnown RBP9.86□□□□□ -0.83
CCDC93-202ENST00000376300 URB2Q14146 1524 aaKnown RBP9.86□□□□□ -0.83
CCDC93-202ENST00000376300 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
CCDC93-202ENST00000376300 WASHC2CQ9Y4E1 1318 aa9.85□□□□□ -0.83
CCDC93-202ENST00000376300 SALL2Q9Y467 1007 aaPredicted RBP9.83□□□□□ -0.84
CCDC93-202ENST00000376300 SAFB2Q14151 953 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC93-202ENST00000376300 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.82□□□□□ -0.84
CCDC93-202ENST00000376300 HSP90AA1P07900 732 aaKnown RBP9.81□□□□□ -0.84
CCDC93-202ENST00000376300 FMN1Q68DA7 1419 aa9.81□□□□□ -0.84
CCDC93-202ENST00000376300 CUX1P39880 1505 aa9.8□□□□□ -0.84
CCDC93-202ENST00000376300 ZNF644Q9H582 1327 aaPredicted RBP9.79□□□□□ -0.84
CCDC93-202ENST00000376300 HNRNPUQ00839 825 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC93-202ENST00000376300 STK26Q9P289 416 aa9.79□□□□□ -0.84
CCDC93-202ENST00000376300 FOXD1Q16676 465 aa9.78□□□□□ -0.84
CCDC93-202ENST00000376300 FAM9BQ8IZU0 186 aa9.78□□□□□ -0.84
CCDC93-202ENST00000376300 NUTM2FA1L443 756 aa9.77□□□□□ -0.84
CCDC93-202ENST00000376300 NAP1L5Q96NT1 182 aaPredicted RBP9.76□□□□□ -0.85
CCDC93-202ENST00000376300 MIER1Q8N108 512 aa9.76□□□□□ -0.85
CCDC93-202ENST00000376300 POGKQ9P215 609 aa9.76□□□□□ -0.85
CCDC93-202ENST00000376300 SENP3-EIF4A1A0A087X0R7 540 aa9.75□□□□□ -0.85
CCDC93-202ENST00000376300 TMC1Q8TDI8 760 aa9.75□□□□□ -0.85
CCDC93-202ENST00000376300 HIRIP3Q9BW71 556 aaPredicted RBP9.75□□□□□ -0.85
CCDC93-202ENST00000376300 DNMBPQ6XZF7 1577 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms