RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
TMEM50A-201ENST00000374358 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
TMEM50A-201ENST00000374358 PCF11O94913 1555 aaKnown RBP22.83■■□□□ 1.24
TMEM50A-201ENST00000374358 DNMBPQ6XZF7 1577 aa22.83■■□□□ 1.24
TMEM50A-201ENST00000374358 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
TMEM50A-201ENST00000374358 LRRC9Q6ZRR7 1453 aa22.82■■□□□ 1.24
TMEM50A-201ENST00000374358 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
TMEM50A-201ENST00000374358 FAM50AQ14320 339 aaKnown RBP22.78■■□□□ 1.24
TMEM50A-201ENST00000374358 ABCA10Q8WWZ4 1543 aa22.78■■□□□ 1.24
TMEM50A-201ENST00000374358 DNAJC5BQ9UF47 199 aa22.75■■□□□ 1.23
TMEM50A-201ENST00000374358 MAP3K1Q13233 1512 aa22.75■■□□□ 1.23
TMEM50A-201ENST00000374358 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
TMEM50A-201ENST00000374358 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
TMEM50A-201ENST00000374358 CFAP43Q8NDM7 1665 aa22.71■■□□□ 1.23
TMEM50A-201ENST00000374358 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
TMEM50A-201ENST00000374358 TDRD9Q8NDG6 1382 aaKnown RBP22.68■■□□□ 1.22
TMEM50A-201ENST00000374358 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
TMEM50A-201ENST00000374358 SETD5Q9C0A6 1442 aa22.66■■□□□ 1.22
TMEM50A-201ENST00000374358 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
TMEM50A-201ENST00000374358 CUL7Q14999 1698 aa22.63■■□□□ 1.21
TMEM50A-201ENST00000374358 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
TMEM50A-201ENST00000374358 FYCO1Q9BQS8 1478 aa22.61■■□□□ 1.21
TMEM50A-201ENST00000374358 EFCAB5A4FU69 1503 aa22.59■■□□□ 1.21
TMEM50A-201ENST00000374358 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
TMEM50A-201ENST00000374358 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
TMEM50A-201ENST00000374358 LAMC3Q9Y6N6 1575 aa22.57■■□□□ 1.2
TMEM50A-201ENST00000374358 SNAPC4Q5SXM2 1469 aa22.52■■□□□ 1.2
TMEM50A-201ENST00000374358 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
TMEM50A-201ENST00000374358 GAPVD1Q14C86 1478 aa22.52■■□□□ 1.2
TMEM50A-201ENST00000374358 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.193e-6■■□□□ 14.2
TMEM50A-201ENST00000374358 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
TMEM50A-201ENST00000374358 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
TMEM50A-201ENST00000374358 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
TMEM50A-201ENST00000374358 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
TMEM50A-201ENST00000374358 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
TMEM50A-201ENST00000374358 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
TMEM50A-201ENST00000374358 HIRIP3Q9BW71 556 aaPredicted RBP22.44■■□□□ 1.18
TMEM50A-201ENST00000374358 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
TMEM50A-201ENST00000374358 SAMD9Q5K651 1589 aa22.44■■□□□ 1.18
TMEM50A-201ENST00000374358 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
TMEM50A-201ENST00000374358 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
TMEM50A-201ENST00000374358 DDX10Q13206 875 aaKnown RBP22.37■■□□□ 1.17
TMEM50A-201ENST00000374358 NCOA2Q15596 1464 aa22.36■■□□□ 1.17
TMEM50A-201ENST00000374358 TARBP1Q13395 1621 aaKnown RBP22.36■■□□□ 1.17
TMEM50A-201ENST00000374358 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.17
TMEM50A-201ENST00000374358 ARID3CA6NKF2 412 aa22.35■■□□□ 1.17
TMEM50A-201ENST00000374358 CCDC18Q5T9S5 1454 aa22.34■■□□□ 1.17
TMEM50A-201ENST00000374358 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
TMEM50A-201ENST00000374358 MYOM3Q5VTT5 1437 aa22.3■■□□□ 1.16
TMEM50A-201ENST00000374358 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
TMEM50A-201ENST00000374358 PPP1R15AO75807 674 aaPredicted RBP22.28■■□□□ 1.16
TMEM50A-201ENST00000374358 HFM1A2PYH4 1435 aa22.28■■□□□ 1.16
TMEM50A-201ENST00000374358 SUPT6HQ7KZ85 1726 aaKnown RBP22.27■■□□□ 1.15
TMEM50A-201ENST00000374358 CHIC2Q9UKJ5 165 aa22.26■■□□□ 1.15
TMEM50A-201ENST00000374358 PBRM1Q86U86 1689 aa22.26■■□□□ 1.15
TMEM50A-201ENST00000374358 NAIPQ13075 1403 aa22.26■■□□□ 1.15
TMEM50A-201ENST00000374358 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
TMEM50A-201ENST00000374358 RRP7BPQ9NSQ0 103 aa22.24■■□□□ 1.15
TMEM50A-201ENST00000374358 TONSLQ96HA7 1378 aa22.23■■□□□ 1.15
TMEM50A-201ENST00000374358 UACAQ9BZF9 1416 aa22.22■■□□□ 1.15
TMEM50A-201ENST00000374358 THOC2Q8NI27 1593 aaKnown RBP22.22■■□□□ 1.15
TMEM50A-201ENST00000374358 UGGT2Q9NYU1 1516 aa22.22■■□□□ 1.15
TMEM50A-201ENST00000374358 SUPT16HQ9Y5B9 1047 aaKnown RBP22.22■■□□□ 1.15
TMEM50A-201ENST00000374358 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
TMEM50A-201ENST00000374358 IQGAP2Q13576 1575 aa22.19■■□□□ 1.14
TMEM50A-201ENST00000374358 TIMELESSQ9UNS1 1208 aa22.19■■□□□ 1.14
TMEM50A-201ENST00000374358 ADAMTS12P58397 1594 aa22.18■■□□□ 1.14
TMEM50A-201ENST00000374358 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
TMEM50A-201ENST00000374358 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
TMEM50A-201ENST00000374358 EPRSP07814 1512 aaKnown RBP22.15■■□□□ 1.14
TMEM50A-201ENST00000374358 HECW1Q76N89 1606 aa22.14■■□□□ 1.13
TMEM50A-201ENST00000374358 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
TMEM50A-201ENST00000374358 KDM6BO15054 1643 aa22.12■■□□□ 1.13
TMEM50A-201ENST00000374358 TRIM52Q96A61 297 aa22.09■■□□□ 1.13
TMEM50A-201ENST00000374358 WDR62O43379 1518 aa22.08■■□□□ 1.13
TMEM50A-201ENST00000374358 DENND4BO75064 1496 aaPredicted RBP22.07■■□□□ 1.12
TMEM50A-201ENST00000374358 KDM5BQ9UGL1 1544 aa22.07■■□□□ 1.12
TMEM50A-201ENST00000374358 FOXD1Q16676 465 aa22.06■■□□□ 1.12
TMEM50A-201ENST00000374358 TCOF1Q13428 1488 aaKnown RBP22.05■■□□□ 1.12
TMEM50A-201ENST00000374358 GCC2Q8IWJ2 1684 aa22.02■■□□□ 1.12
TMEM50A-201ENST00000374358 ANP32CO43423 234 aa22.02■■□□□ 1.11
TMEM50A-201ENST00000374358 ZNF644Q9H582 1327 aaPredicted RBP22.01■■□□□ 1.11
TMEM50A-201ENST00000374358 BCANQ96GW7 911 aa22■■□□□ 1.11
TMEM50A-201ENST00000374358 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
TMEM50A-201ENST00000374358 IFT140Q96RY7 1462 aa21.97■■□□□ 1.11
TMEM50A-201ENST00000374358 KIAA0556O60303 1618 aa21.96■■□□□ 1.11
TMEM50A-201ENST00000374358 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
TMEM50A-201ENST00000374358 MIA2Q96PC5 1412 aa21.95■■□□□ 1.1
TMEM50A-201ENST00000374358 NUP153P49790 1475 aaKnown RBP21.94■■□□□ 1.1
TMEM50A-201ENST00000374358 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
TMEM50A-201ENST00000374358 KIAA0586Q9BVV6 1533 aa21.93■■□□□ 1.1
TMEM50A-201ENST00000374358 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
TMEM50A-201ENST00000374358 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
TMEM50A-201ENST00000374358 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
TMEM50A-201ENST00000374358 DAPK1P53355 1430 aa21.9■■□□□ 1.1
TMEM50A-201ENST00000374358 AKNAQ7Z591 1439 aa21.9■■□□□ 1.1
TMEM50A-201ENST00000374358 FKBP8Q14318 412 aa21.9■■□□□ 1.1
TMEM50A-201ENST00000374358 L3MBTL2Q969R5 705 aa21.89■■□□□ 1.1
TMEM50A-201ENST00000374358 FBLN2P98095 1184 aa21.89■■□□□ 1.09
TMEM50A-201ENST00000374358 WASHC2AQ641Q2 1341 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms