RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
SUSD1-204ENST00000374270 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
SUSD1-204ENST00000374270 SIN3AQ96ST3 1273 aa29.14■■■□□ 2.25
SUSD1-204ENST00000374270 PHLDB1Q86UU1 1377 aa29.11■■■□□ 2.25
SUSD1-204ENST00000374270 HIRIP3Q9BW71 556 aaPredicted RBP29.09■■■□□ 2.25
SUSD1-204ENST00000374270 RAB3GAP2Q9H2M9 1393 aa29.07■■■□□ 2.24
SUSD1-204ENST00000374270 RRBP1Q9P2E9 1410 aaKnown RBP29.02■■■□□ 2.24
SUSD1-204ENST00000374270 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
SUSD1-204ENST00000374270 DNMBPQ6XZF7 1577 aa28.97■■■□□ 2.23
SUSD1-204ENST00000374270 CHIC2Q9UKJ5 165 aa28.96■■■□□ 2.23
SUSD1-204ENST00000374270 LRRC9Q6ZRR7 1453 aa28.95■■■□□ 2.22
SUSD1-204ENST00000374270 FHAD1B1AJZ9 1412 aa28.94■■■□□ 2.22
SUSD1-204ENST00000374270 MTUS2Q5JR59 1369 aa28.93■■■□□ 2.22
SUSD1-204ENST00000374270 FBLN2P98095 1184 aa28.92■■■□□ 2.22
SUSD1-204ENST00000374270 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
SUSD1-204ENST00000374270 PRDM2Q13029 1718 aa28.92■■■□□ 2.22
SUSD1-204ENST00000374270 PDS5BQ9NTI5 1447 aa28.9■■■□□ 2.22
SUSD1-204ENST00000374270 TIAM1Q13009 1591 aa28.89■■■□□ 2.22
SUSD1-204ENST00000374270 AQRO60306 1485 aaKnown RBP eCLIP28.86■■■□□ 2.211e-7■■■□□ 15.2
SUSD1-204ENST00000374270 GAPVD1Q14C86 1478 aa28.86■■■□□ 2.21
SUSD1-204ENST00000374270 PCF11O94913 1555 aaKnown RBP28.86■■■□□ 2.21
SUSD1-204ENST00000374270 SETD5Q9C0A6 1442 aa28.83■■■□□ 2.21
SUSD1-204ENST00000374270 RRP7BPQ9NSQ0 103 aa28.82■■■□□ 2.2
SUSD1-204ENST00000374270 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
SUSD1-204ENST00000374270 DDX10Q13206 875 aaKnown RBP28.77■■■□□ 2.2
SUSD1-204ENST00000374270 TRIM52Q96A61 297 aa28.74■■■□□ 2.19
SUSD1-204ENST00000374270 KCNH8Q96L42 1107 aa28.74■■■□□ 2.19
SUSD1-204ENST00000374270 PELP1Q8IZL8 1130 aaKnown RBP28.7■■■□□ 2.18
SUSD1-204ENST00000374270 LAMC3Q9Y6N6 1575 aa28.68■■■□□ 2.18
SUSD1-204ENST00000374270 FMN1Q68DA7 1419 aa28.67■■■□□ 2.18
SUSD1-204ENST00000374270 CASKIN1Q8WXD9 1431 aa28.67■■■□□ 2.18
SUSD1-204ENST00000374270 KIF21AQ7Z4S6 1674 aa28.61■■■□□ 2.17
SUSD1-204ENST00000374270 FYCO1Q9BQS8 1478 aa28.59■■■□□ 2.17
SUSD1-204ENST00000374270 FOXD1Q16676 465 aa28.58■■■□□ 2.17
SUSD1-204ENST00000374270 FGD6Q6ZV73 1430 aa28.56■■■□□ 2.16
SUSD1-204ENST00000374270 MAPKBP1O60336 1514 aa28.55■■■□□ 2.16
SUSD1-204ENST00000374270 ZNF777Q9ULD5 760 aaPredicted RBP28.54■■■□□ 2.16
SUSD1-204ENST00000374270 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
SUSD1-204ENST00000374270 CUL7Q14999 1698 aa28.52■■■□□ 2.16
SUSD1-204ENST00000374270 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
SUSD1-204ENST00000374270 PTPRKQ15262 1439 aa28.52■■■□□ 2.16
SUSD1-204ENST00000374270 TONSLQ96HA7 1378 aa28.5■■■□□ 2.15
SUSD1-204ENST00000374270 MAP3K1Q13233 1512 aa28.5■■■□□ 2.15
SUSD1-204ENST00000374270 EFCAB5A4FU69 1503 aa28.49■■■□□ 2.15
SUSD1-204ENST00000374270 NCOA2Q15596 1464 aa28.48■■■□□ 2.15
SUSD1-204ENST00000374270 CNGB1Q14028 1251 aaPredicted RBP28.46■■■□□ 2.15
SUSD1-204ENST00000374270 SNAPC4Q5SXM2 1469 aa28.45■■■□□ 2.15
SUSD1-204ENST00000374270 ZNF644Q9H582 1327 aaPredicted RBP28.44■■■□□ 2.14
SUSD1-204ENST00000374270 ERCC6Q03468 1493 aa28.44■■■□□ 2.14
SUSD1-204ENST00000374270 WDR97A6NE52 1622 aa28.44■■■□□ 2.14
SUSD1-204ENST00000374270 PPP1R15AO75807 674 aaPredicted RBP28.43■■■□□ 2.14
SUSD1-204ENST00000374270 CTTNBP2Q8WZ74 1663 aa28.43■■■□□ 2.14
SUSD1-204ENST00000374270 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
SUSD1-204ENST00000374270 CDK13Q14004 1512 aaKnown RBP28.39■■■□□ 2.14
SUSD1-204ENST00000374270 CFAP43Q8NDM7 1665 aa28.39■■■□□ 2.14
SUSD1-204ENST00000374270 CCDC18Q5T9S5 1454 aa28.38■■■□□ 2.13
SUSD1-204ENST00000374270 MYOM3Q5VTT5 1437 aa28.36■■■□□ 2.13
SUSD1-204ENST00000374270 MRC2Q9UBG0 1479 aa28.36■■■□□ 2.13
SUSD1-204ENST00000374270 BCANQ96GW7 911 aa28.33■■■□□ 2.13
SUSD1-204ENST00000374270 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
SUSD1-204ENST00000374270 TARBP1Q13395 1621 aaKnown RBP28.3■■■□□ 2.12
SUSD1-204ENST00000374270 MAGI3Q5TCQ9 1506 aa28.28■■■□□ 2.12
SUSD1-204ENST00000374270 ZNF326Q5BKZ1 582 aaKnown RBP28.27■■■□□ 2.12
SUSD1-204ENST00000374270 NAIPQ13075 1403 aa28.25■■■□□ 2.11
SUSD1-204ENST00000374270 POLR3GLQ9BT43 218 aa28.25■■■□□ 2.11
SUSD1-204ENST00000374270 ANP32CO43423 234 aa28.22■■■□□ 2.11
SUSD1-204ENST00000374270 EPRSP07814 1512 aaKnown RBP28.21■■■□□ 2.11
SUSD1-204ENST00000374270 IQGAP2Q13576 1575 aa28.21■■■□□ 2.11
SUSD1-204ENST00000374270 MPHOSPH9Q99550 1183 aa28.21■■■□□ 2.11
SUSD1-204ENST00000374270 SAMD9Q5K651 1589 aa28.2■■■□□ 2.11
SUSD1-204ENST00000374270 HFM1A2PYH4 1435 aa28.19■■■□□ 2.1
SUSD1-204ENST00000374270 CFDP1Q9UEE9 299 aaPredicted RBP28.18■■■□□ 2.1
SUSD1-204ENST00000374270 CDK11AQ9UQ88 783 aaPredicted RBP28.18■■■□□ 2.1
SUSD1-204ENST00000374270 LRRIQ1Q96JM4 1722 aa28.18■■■□□ 2.1
SUSD1-204ENST00000374270 SLC4A1APQ9BWU0 796 aaKnown RBP28.17■■■□□ 2.1
SUSD1-204ENST00000374270 UACAQ9BZF9 1416 aa28.16■■■□□ 2.1
SUSD1-204ENST00000374270 JPH4Q96JJ6 628 aa28.16■■■□□ 2.1
SUSD1-204ENST00000374270 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
SUSD1-204ENST00000374270 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
SUSD1-204ENST00000374270 SUPT6HQ7KZ85 1726 aaKnown RBP28.12■■■□□ 2.09
SUSD1-204ENST00000374270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.12■■■□□ 2.09
SUSD1-204ENST00000374270 L3MBTL2Q969R5 705 aa28.12■■■□□ 2.09
SUSD1-204ENST00000374270 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
SUSD1-204ENST00000374270 PTPN23Q9H3S7 1636 aa28.11■■■□□ 2.09
SUSD1-204ENST00000374270 PBRM1Q86U86 1689 aa28.11■■■□□ 2.09
SUSD1-204ENST00000374270 PRG4Q92954 1404 aaPredicted RBP28.1■■■□□ 2.09
SUSD1-204ENST00000374270 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
SUSD1-204ENST00000374270 HSPA5P11021 654 aaKnown RBP28.09■■■□□ 2.09
SUSD1-204ENST00000374270 SUPT16HQ9Y5B9 1047 aaKnown RBP28.08■■■□□ 2.09
SUSD1-204ENST00000374270 TIMELESSQ9UNS1 1208 aa28.08■■■□□ 2.09
SUSD1-204ENST00000374270 UGGT2Q9NYU1 1516 aa28.05■■■□□ 2.08
SUSD1-204ENST00000374270 PLB1Q6P1J6 1458 aa28.05■■■□□ 2.08
SUSD1-204ENST00000374270 SENP3-EIF4A1A0A087X0R7 540 aa28.03■■■□□ 2.08
SUSD1-204ENST00000374270 HECW1Q76N89 1606 aa28.01■■■□□ 2.08
SUSD1-204ENST00000374270 GRIN2AQ12879 1464 aa28■■■□□ 2.07
SUSD1-204ENST00000374270 KIAA0586Q9BVV6 1533 aa28■■■□□ 2.07
SUSD1-204ENST00000374270 PLEKHD1A6NEE1 506 aa27.99■■■□□ 2.07
SUSD1-204ENST00000374270 FKBP8Q14318 412 aa27.99■■■□□ 2.07
SUSD1-204ENST00000374270 KDM6BO15054 1643 aa27.97■■■□□ 2.07
SUSD1-204ENST00000374270 DISP1Q96F81 1524 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms