RNA–Protein interactions for RNA: ENST00000374152.7

ARID1A-202, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-202ENST00000374152 ARID4BQ4LE39 1312 aaPredicted RBP12.66□□□□□ -0.38
ARID1A-202ENST00000374152 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
ARID1A-202ENST00000374152 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
ARID1A-202ENST00000374152 CFDP1Q9UEE9 299 aaPredicted RBP12.64□□□□□ -0.39
ARID1A-202ENST00000374152 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
ARID1A-202ENST00000374152 PPP1R15AO75807 674 aaPredicted RBP12.63□□□□□ -0.39
ARID1A-202ENST00000374152 CUX2O14529 1486 aa12.62□□□□□ -0.39
ARID1A-202ENST00000374152 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
ARID1A-202ENST00000374152 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
ARID1A-202ENST00000374152 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
ARID1A-202ENST00000374152 ABCC8Q09428 1581 aa12.6□□□□□ -0.39
ARID1A-202ENST00000374152 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
ARID1A-202ENST00000374152 TMC1Q8TDI8 760 aa12.59□□□□□ -0.39
ARID1A-202ENST00000374152 SOGA1O94964 1423 aa12.59□□□□□ -0.39
ARID1A-202ENST00000374152 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
ARID1A-202ENST00000374152 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
ARID1A-202ENST00000374152 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
ARID1A-202ENST00000374152 NPM2Q86SE8 214 aaKnown RBP12.56□□□□□ -0.4
ARID1A-202ENST00000374152 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
ARID1A-202ENST00000374152 FKBP8Q14318 412 aa12.56□□□□□ -0.4
ARID1A-202ENST00000374152 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
ARID1A-202ENST00000374152 A0A0G2JS52 829 aa12.55□□□□□ -0.4
ARID1A-202ENST00000374152 WIZO95785 1651 aa12.55□□□□□ -0.4
ARID1A-202ENST00000374152 MRS2Q9HD23 443 aa12.53□□□□□ -0.4
ARID1A-202ENST00000374152 EIF4G2P78344 907 aaKnown RBP eCLIP12.52□□□□□ -0.4
ARID1A-202ENST00000374152 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
ARID1A-202ENST00000374152 CCNB3Q8WWL7 1395 aa12.5□□□□□ -0.41
ARID1A-202ENST00000374152 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
ARID1A-202ENST00000374152 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
ARID1A-202ENST00000374152 TDRD9Q8NDG6 1382 aaKnown RBP12.47□□□□□ -0.41
ARID1A-202ENST00000374152 MLECQ14165 292 aa12.46□□□□□ -0.41
ARID1A-202ENST00000374152 MIER1Q8N108 512 aa12.46□□□□□ -0.41
ARID1A-202ENST00000374152 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.42
ARID1A-202ENST00000374152 SIN3AQ96ST3 1273 aa12.45□□□□□ -0.42
ARID1A-202ENST00000374152 TOP2AP11388 1531 aaKnown RBP12.45□□□□□ -0.42
ARID1A-202ENST00000374152 FHAD1B1AJZ9 1412 aa12.45□□□□□ -0.42
ARID1A-202ENST00000374152 CARD11Q9BXL7 1154 aa12.44□□□□□ -0.42
ARID1A-202ENST00000374152 IRX6P78412 446 aaPredicted RBP12.44□□□□□ -0.42
ARID1A-202ENST00000374152 PPM1GO15355 546 aaPredicted RBP12.42□□□□□ -0.42
ARID1A-202ENST00000374152 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
ARID1A-202ENST00000374152 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.4□□□□□ -0.43
ARID1A-202ENST00000374152 POGKQ9P215 609 aa12.39□□□□□ -0.43
ARID1A-202ENST00000374152 CCDC136Q96JN2 1154 aa12.38□□□□□ -0.43
ARID1A-202ENST00000374152 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
ARID1A-202ENST00000374152 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
ARID1A-202ENST00000374152 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
ARID1A-202ENST00000374152 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
ARID1A-202ENST00000374152 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
ARID1A-202ENST00000374152 ARHGAP35Q9NRY4 1499 aa12.36□□□□□ -0.43
ARID1A-202ENST00000374152 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
ARID1A-202ENST00000374152 KANK4Q5T7N3 995 aaPredicted RBP12.35□□□□□ -0.43
ARID1A-202ENST00000374152 KANK1Q14678 1352 aa12.35□□□□□ -0.43
ARID1A-202ENST00000374152 CADPSQ9ULU8 1353 aa12.35□□□□□ -0.43
ARID1A-202ENST00000374152 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
ARID1A-202ENST00000374152 ATAD2BQ9ULI0 1458 aa12.34□□□□□ -0.43
ARID1A-202ENST00000374152 GGT6Q6P531 493 aa12.34□□□□□ -0.43
ARID1A-202ENST00000374152 DCAF11Q8TEB1 546 aa12.34□□□□□ -0.43
ARID1A-202ENST00000374152 CDCA8Q53HL2 280 aa12.33□□□□□ -0.44
ARID1A-202ENST00000374152 CFAP53Q96M91 514 aa12.33□□□□□ -0.44
ARID1A-202ENST00000374152 FOXD1Q16676 465 aa12.32□□□□□ -0.44
ARID1A-202ENST00000374152 CC2D1BQ5T0F9 858 aaKnown RBP12.32□□□□□ -0.44
ARID1A-202ENST00000374152 VPS8Q8N3P4 1428 aa12.31□□□□□ -0.44
ARID1A-202ENST00000374152 NEUROD2Q15784 382 aa12.31□□□□□ -0.44
ARID1A-202ENST00000374152 SAFB2Q14151 953 aaKnown RBP eCLIP12.31□□□□□ -0.44
ARID1A-202ENST00000374152 ARXQ96QS3 562 aa12.31□□□□□ -0.44
ARID1A-202ENST00000374152 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
ARID1A-202ENST00000374152 LAS1LQ9Y4W2 734 aaKnown RBP12.3□□□□□ -0.44
ARID1A-202ENST00000374152 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
ARID1A-202ENST00000374152 CDK11BP21127 795 aaKnown RBP12.29□□□□□ -0.44
ARID1A-202ENST00000374152 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
ARID1A-202ENST00000374152 SOX12O15370 315 aa12.27□□□□□ -0.45
ARID1A-202ENST00000374152 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.45
ARID1A-202ENST00000374152 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
ARID1A-202ENST00000374152 SETD5Q9C0A6 1442 aa12.26□□□□□ -0.45
ARID1A-202ENST00000374152 FMN1Q68DA7 1419 aa12.26□□□□□ -0.45
ARID1A-202ENST00000374152 PKD2Q13563 968 aa12.26□□□□□ -0.45
ARID1A-202ENST00000374152 STK26Q9P289 416 aa12.26□□□□□ -0.45
ARID1A-202ENST00000374152 MAPK8IP3Q9UPT6 1336 aa12.24□□□□□ -0.45
ARID1A-202ENST00000374152 HNRNPMP52272 730 aaKnown RBP eCLIP12.24□□□□□ -0.451e-7■■■■■ 38.2
ARID1A-202ENST00000374152 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
ARID1A-202ENST00000374152 U2SURPO15042 1029 aaKnown RBP12.23□□□□□ -0.45
ARID1A-202ENST00000374152 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
ARID1A-202ENST00000374152 TMF1P82094 1093 aa12.23□□□□□ -0.45
ARID1A-202ENST00000374152 EFCAB2Q5VUJ9 269 aa12.21□□□□□ -0.45
ARID1A-202ENST00000374152 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
ARID1A-202ENST00000374152 HDGFP51858 240 aaKnown RBP12.2□□□□□ -0.46
ARID1A-202ENST00000374152 RUSC2Q8N2Y8 1516 aa12.2□□□□□ -0.46
ARID1A-202ENST00000374152 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
ARID1A-202ENST00000374152 NUP155O75694 1391 aa12.19□□□□□ -0.46
ARID1A-202ENST00000374152 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
ARID1A-202ENST00000374152 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
ARID1A-202ENST00000374152 KIF3BO15066 747 aa12.18□□□□□ -0.46
ARID1A-202ENST00000374152 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
ARID1A-202ENST00000374152 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
ARID1A-202ENST00000374152 HSPA5P11021 654 aaKnown RBP12.18□□□□□ -0.46
ARID1A-202ENST00000374152 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
ARID1A-202ENST00000374152 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
ARID1A-202ENST00000374152 NBR1Q14596 966 aa12.17□□□□□ -0.46
ARID1A-202ENST00000374152 FRAT1Q92837 279 aaPredicted RBP12.16□□□□□ -0.46
ARID1A-202ENST00000374152 ROCK2O75116 1388 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms