RNA–Protein interactions for RNA: ENST00000373832.5

RCC1-202, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-202ENST00000373832 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
RCC1-202ENST00000373832 MAPKBP1O60336 1514 aa25.33■■□□□ 1.65
RCC1-202ENST00000373832 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
RCC1-202ENST00000373832 CFAP43Q8NDM7 1665 aa25.3■■□□□ 1.64
RCC1-202ENST00000373832 FAM50AQ14320 339 aaKnown RBP25.3■■□□□ 1.64
RCC1-202ENST00000373832 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
RCC1-202ENST00000373832 PCF11O94913 1555 aaKnown RBP25.29■■□□□ 1.64
RCC1-202ENST00000373832 ATP1B4Q9UN42 357 aaPredicted RBP25.28■■□□□ 1.64
RCC1-202ENST00000373832 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
RCC1-202ENST00000373832 RAD54L2Q9Y4B4 1467 aa25.23■■□□□ 1.63
RCC1-202ENST00000373832 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
RCC1-202ENST00000373832 FHOD3Q2V2M9 1422 aa25.22■■□□□ 1.63
RCC1-202ENST00000373832 EFCAB5A4FU69 1503 aa25.19■■□□□ 1.62
RCC1-202ENST00000373832 FYCO1Q9BQS8 1478 aa25.19■■□□□ 1.62
RCC1-202ENST00000373832 TOPBP1Q92547 1522 aa25.18■■□□□ 1.62
RCC1-202ENST00000373832 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
RCC1-202ENST00000373832 CASKIN1Q8WXD9 1431 aa25.15■■□□□ 1.62
RCC1-202ENST00000373832 SIN3AQ96ST3 1273 aa25.15■■□□□ 1.62
RCC1-202ENST00000373832 CUL7Q14999 1698 aa25.14■■□□□ 1.62
RCC1-202ENST00000373832 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.612e-9■■■■■ 45.5
RCC1-202ENST00000373832 WDR97A6NE52 1622 aa25.11■■□□□ 1.61
RCC1-202ENST00000373832 CTTNBP2Q8WZ74 1663 aa25.11■■□□□ 1.61
RCC1-202ENST00000373832 SUPT16HQ9Y5B9 1047 aaKnown RBP25.1■■□□□ 1.61
RCC1-202ENST00000373832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.08■■□□□ 1.61
RCC1-202ENST00000373832 NESP48681 1621 aa25.08■■□□□ 1.61
RCC1-202ENST00000373832 TIMELESSQ9UNS1 1208 aa25.07■■□□□ 1.6
RCC1-202ENST00000373832 FMN1Q68DA7 1419 aa25.06■■□□□ 1.6
RCC1-202ENST00000373832 MYT1Q01538 1121 aa25.03■■□□□ 1.6
RCC1-202ENST00000373832 KCNH8Q96L42 1107 aa25.02■■□□□ 1.6
RCC1-202ENST00000373832 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
RCC1-202ENST00000373832 FGD6Q6ZV73 1430 aa25■■□□□ 1.59
RCC1-202ENST00000373832 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
RCC1-202ENST00000373832 SNAPC4Q5SXM2 1469 aa24.97■■□□□ 1.59
RCC1-202ENST00000373832 PPP1R15AO75807 674 aaPredicted RBP24.96■■□□□ 1.59
RCC1-202ENST00000373832 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
RCC1-202ENST00000373832 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
RCC1-202ENST00000373832 CCDC18Q5T9S5 1454 aa24.91■■□□□ 1.58
RCC1-202ENST00000373832 TDRD9Q8NDG6 1382 aaKnown RBP24.9■■□□□ 1.58
RCC1-202ENST00000373832 SAMD9Q5K651 1589 aa24.89■■□□□ 1.58
RCC1-202ENST00000373832 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
RCC1-202ENST00000373832 HIRIP3Q9BW71 556 aaPredicted RBP24.87■■□□□ 1.57
RCC1-202ENST00000373832 GAPVD1Q14C86 1478 aa24.86■■□□□ 1.57
RCC1-202ENST00000373832 TONSLQ96HA7 1378 aa24.86■■□□□ 1.57
RCC1-202ENST00000373832 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
RCC1-202ENST00000373832 PTPRKQ15262 1439 aa24.84■■□□□ 1.57
RCC1-202ENST00000373832 LRRIQ1Q96JM4 1722 aa24.84■■□□□ 1.57
RCC1-202ENST00000373832 UACAQ9BZF9 1416 aa24.84■■□□□ 1.57
RCC1-202ENST00000373832 NCOA2Q15596 1464 aa24.84■■□□□ 1.57
RCC1-202ENST00000373832 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.57
RCC1-202ENST00000373832 GRIN2BQ13224 1484 aa24.83■■□□□ 1.57
RCC1-202ENST00000373832 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
RCC1-202ENST00000373832 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
RCC1-202ENST00000373832 SUPT6HQ7KZ85 1726 aaKnown RBP24.8■■□□□ 1.56
RCC1-202ENST00000373832 ANP32CO43423 234 aa24.79■■□□□ 1.56
RCC1-202ENST00000373832 EHBP1L1Q8N3D4 1523 aa24.78■■□□□ 1.56
RCC1-202ENST00000373832 NAIPQ13075 1403 aa24.77■■□□□ 1.56
RCC1-202ENST00000373832 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
RCC1-202ENST00000373832 CCER2I3L3R5 266 aa24.77■■□□□ 1.56
RCC1-202ENST00000373832 KIF21AQ7Z4S6 1674 aa24.71■■□□□ 1.55
RCC1-202ENST00000373832 UGGT2Q9NYU1 1516 aa24.7■■□□□ 1.55
RCC1-202ENST00000373832 TSHZ2Q9NRE2 1034 aa24.7■■□□□ 1.54
RCC1-202ENST00000373832 FKBP8Q14318 412 aa24.67■■□□□ 1.54
RCC1-202ENST00000373832 ARHGEF11O15085 1522 aa24.66■■□□□ 1.54
RCC1-202ENST00000373832 MAGI3Q5TCQ9 1506 aa24.66■■□□□ 1.54
RCC1-202ENST00000373832 BCANQ96GW7 911 aa24.65■■□□□ 1.54
RCC1-202ENST00000373832 TARBP1Q13395 1621 aaKnown RBP24.63■■□□□ 1.53
RCC1-202ENST00000373832 TRIM52Q96A61 297 aa24.63■■□□□ 1.53
RCC1-202ENST00000373832 RRP7BPQ9NSQ0 103 aa24.63■■□□□ 1.53
RCC1-202ENST00000373832 HECW1Q76N89 1606 aa24.62■■□□□ 1.53
RCC1-202ENST00000373832 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
RCC1-202ENST00000373832 TCOF1Q13428 1488 aaKnown RBP24.61■■□□□ 1.53
RCC1-202ENST00000373832 NEFLP07196 543 aa24.6■■□□□ 1.53
RCC1-202ENST00000373832 KDM5BQ9UGL1 1544 aa24.59■■□□□ 1.53
RCC1-202ENST00000373832 GCC2Q8IWJ2 1684 aa24.57■■□□□ 1.52
RCC1-202ENST00000373832 PBRM1Q86U86 1689 aa24.57■■□□□ 1.52
RCC1-202ENST00000373832 IQGAP2Q13576 1575 aa24.56■■□□□ 1.52
RCC1-202ENST00000373832 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
RCC1-202ENST00000373832 EPRSP07814 1512 aaKnown RBP24.55■■□□□ 1.52
RCC1-202ENST00000373832 AKNAQ7Z591 1439 aa24.52■■□□□ 1.52
RCC1-202ENST00000373832 MIA2Q96PC5 1412 aa24.5■■□□□ 1.51
RCC1-202ENST00000373832 CDK13Q14004 1512 aaKnown RBP24.5■■□□□ 1.51
RCC1-202ENST00000373832 DENND4BO75064 1496 aaPredicted RBP24.49■■□□□ 1.51
RCC1-202ENST00000373832 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
RCC1-202ENST00000373832 KDM6BO15054 1643 aa24.48■■□□□ 1.51
RCC1-202ENST00000373832 HSPA5P11021 654 aaKnown RBP24.47■■□□□ 1.51
RCC1-202ENST00000373832 WDR62O43379 1518 aa24.46■■□□□ 1.51
RCC1-202ENST00000373832 ARID3CA6NKF2 412 aa24.46■■□□□ 1.51
RCC1-202ENST00000373832 MPHOSPH9Q99550 1183 aa24.46■■□□□ 1.51
RCC1-202ENST00000373832 WASHC2AQ641Q2 1341 aa24.43■■□□□ 1.5
RCC1-202ENST00000373832 EIF4G2P78344 907 aaKnown RBP eCLIP24.43■■□□□ 1.5
RCC1-202ENST00000373832 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
RCC1-202ENST00000373832 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
RCC1-202ENST00000373832 MRC2Q9UBG0 1479 aa24.37■■□□□ 1.49
RCC1-202ENST00000373832 FOXD1Q16676 465 aa24.36■■□□□ 1.49
RCC1-202ENST00000373832 DAPK1P53355 1430 aa24.34■■□□□ 1.49
RCC1-202ENST00000373832 ROCK1Q13464 1354 aa24.34■■□□□ 1.49
RCC1-202ENST00000373832 CNTLNQ9NXG0 1405 aa24.32■■□□□ 1.48
RCC1-202ENST00000373832 ABCC5O15440 1437 aa24.29■■□□□ 1.48
RCC1-202ENST00000373832 KIAA0556O60303 1618 aa24.29■■□□□ 1.48
RCC1-202ENST00000373832 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms