RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 PCF11O94913 1555 aaKnown RBP24.65■■□□□ 1.54
HDAC8-206ENST00000373571 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
HDAC8-206ENST00000373571 NEUROD1Q13562 356 aa24.65■■□□□ 1.54
HDAC8-206ENST00000373571 CFAP43Q8NDM7 1665 aa24.65■■□□□ 1.54
HDAC8-206ENST00000373571 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
HDAC8-206ENST00000373571 CTTNBP2Q8WZ74 1663 aa24.63■■□□□ 1.53
HDAC8-206ENST00000373571 CENPBP07199 599 aaPredicted RBP24.63■■□□□ 1.53
HDAC8-206ENST00000373571 EFCAB5A4FU69 1503 aa24.62■■□□□ 1.53
HDAC8-206ENST00000373571 P3H3Q8IVL6 736 aa24.61■■□□□ 1.53
HDAC8-206ENST00000373571 ITGAEP38570 1179 aa24.6■■□□□ 1.53
HDAC8-206ENST00000373571 FHOD3Q2V2M9 1422 aa24.59■■□□□ 1.53
HDAC8-206ENST00000373571 PHLDB1Q86UU1 1377 aa24.55■■□□□ 1.52
HDAC8-206ENST00000373571 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
HDAC8-206ENST00000373571 ABCA5Q8WWZ7 1642 aa24.55■■□□□ 1.52
HDAC8-206ENST00000373571 PDS5BQ9NTI5 1447 aa24.54■■□□□ 1.52
HDAC8-206ENST00000373571 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
HDAC8-206ENST00000373571 CASKIN1Q8WXD9 1431 aa24.51■■□□□ 1.51
HDAC8-206ENST00000373571 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
HDAC8-206ENST00000373571 RAB3GAP2Q9H2M9 1393 aa24.5■■□□□ 1.51
HDAC8-206ENST00000373571 MIER1Q8N108 512 aa24.5■■□□□ 1.51
HDAC8-206ENST00000373571 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
HDAC8-206ENST00000373571 KIF21AQ7Z4S6 1674 aa24.48■■□□□ 1.51
HDAC8-206ENST00000373571 GAPVD1Q14C86 1478 aa24.47■■□□□ 1.51
HDAC8-206ENST00000373571 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
HDAC8-206ENST00000373571 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
HDAC8-206ENST00000373571 SETD5Q9C0A6 1442 aa24.44■■□□□ 1.5
HDAC8-206ENST00000373571 FAM50AQ14320 339 aaKnown RBP24.43■■□□□ 1.5
HDAC8-206ENST00000373571 SAMD9Q5K651 1589 aa24.4■■□□□ 1.5
HDAC8-206ENST00000373571 MAPKBP1O60336 1514 aa24.39■■□□□ 1.5
HDAC8-206ENST00000373571 SNAPC4Q5SXM2 1469 aa24.39■■□□□ 1.5
HDAC8-206ENST00000373571 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
HDAC8-206ENST00000373571 YTHDC1Q96MU7 727 aaKnown RBP24.37■■□□□ 1.49
HDAC8-206ENST00000373571 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
HDAC8-206ENST00000373571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.32■■□□□ 1.48
HDAC8-206ENST00000373571 LRRIQ1Q96JM4 1722 aa24.29■■□□□ 1.48
HDAC8-206ENST00000373571 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
HDAC8-206ENST00000373571 MTUS2Q5JR59 1369 aa24.26■■□□□ 1.47
HDAC8-206ENST00000373571 FGD6Q6ZV73 1430 aa24.26■■□□□ 1.47
HDAC8-206ENST00000373571 GRIN2BQ13224 1484 aa24.26■■□□□ 1.47
HDAC8-206ENST00000373571 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
HDAC8-206ENST00000373571 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
HDAC8-206ENST00000373571 SUPT6HQ7KZ85 1726 aaKnown RBP24.17■■□□□ 1.46
HDAC8-206ENST00000373571 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
HDAC8-206ENST00000373571 NCOA2Q15596 1464 aa24.17■■□□□ 1.46
HDAC8-206ENST00000373571 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
HDAC8-206ENST00000373571 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.46
HDAC8-206ENST00000373571 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
HDAC8-206ENST00000373571 IQGAP2Q13576 1575 aa24.14■■□□□ 1.45
HDAC8-206ENST00000373571 MYOM3Q5VTT5 1437 aa24.13■■□□□ 1.45
HDAC8-206ENST00000373571 CCDC18Q5T9S5 1454 aa24.11■■□□□ 1.45
HDAC8-206ENST00000373571 HECW1Q76N89 1606 aa24.09■■□□□ 1.45
HDAC8-206ENST00000373571 PTPRKQ15262 1439 aa24.09■■□□□ 1.45
HDAC8-206ENST00000373571 UGGT2Q9NYU1 1516 aa24.08■■□□□ 1.45
HDAC8-206ENST00000373571 HFM1A2PYH4 1435 aa24.08■■□□□ 1.44
HDAC8-206ENST00000373571 MAGI3Q5TCQ9 1506 aa24.07■■□□□ 1.44
HDAC8-206ENST00000373571 TIMELESSQ9UNS1 1208 aa24.07■■□□□ 1.44
HDAC8-206ENST00000373571 PTPN23Q9H3S7 1636 aa24.07■■□□□ 1.44
HDAC8-206ENST00000373571 ARHGEF11O15085 1522 aa24.06■■□□□ 1.44
HDAC8-206ENST00000373571 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
HDAC8-206ENST00000373571 WDR62O43379 1518 aa24■■□□□ 1.43
HDAC8-206ENST00000373571 UACAQ9BZF9 1416 aa24■■□□□ 1.43
HDAC8-206ENST00000373571 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
HDAC8-206ENST00000373571 NAIPQ13075 1403 aa24■■□□□ 1.43
HDAC8-206ENST00000373571 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
HDAC8-206ENST00000373571 TCOF1Q13428 1488 aaKnown RBP23.95■■□□□ 1.42
HDAC8-206ENST00000373571 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
HDAC8-206ENST00000373571 CDK13Q14004 1512 aaKnown RBP23.94■■□□□ 1.42
HDAC8-206ENST00000373571 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
HDAC8-206ENST00000373571 KIAA0586Q9BVV6 1533 aa23.89■■□□□ 1.41
HDAC8-206ENST00000373571 GCC2Q8IWJ2 1684 aa23.89■■□□□ 1.41
HDAC8-206ENST00000373571 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
HDAC8-206ENST00000373571 KIAA0556O60303 1618 aa23.88■■□□□ 1.41
HDAC8-206ENST00000373571 MIA2Q96PC5 1412 aa23.86■■□□□ 1.41
HDAC8-206ENST00000373571 DISP1Q96F81 1524 aa23.85■■□□□ 1.41
HDAC8-206ENST00000373571 ARID3CA6NKF2 412 aa23.84■■□□□ 1.41
HDAC8-206ENST00000373571 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
HDAC8-206ENST00000373571 DDX10Q13206 875 aaKnown RBP23.83■■□□□ 1.41
HDAC8-206ENST00000373571 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.41
HDAC8-206ENST00000373571 CHIC2Q9UKJ5 165 aa23.83■■□□□ 1.4
HDAC8-206ENST00000373571 AKNAQ7Z591 1439 aa23.83■■□□□ 1.4
HDAC8-206ENST00000373571 ERCC6Q03468 1493 aa23.79■■□□□ 1.4
HDAC8-206ENST00000373571 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
HDAC8-206ENST00000373571 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
HDAC8-206ENST00000373571 NUP153P49790 1475 aaKnown RBP23.76■■□□□ 1.39
HDAC8-206ENST00000373571 KDM6BO15054 1643 aa23.76■■□□□ 1.39
HDAC8-206ENST00000373571 KCNH8Q96L42 1107 aa23.75■■□□□ 1.39
HDAC8-206ENST00000373571 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
HDAC8-206ENST00000373571 KDM5BQ9UGL1 1544 aa23.73■■□□□ 1.39
HDAC8-206ENST00000373571 DENND4BO75064 1496 aaPredicted RBP23.72■■□□□ 1.39
HDAC8-206ENST00000373571 TRIM52Q96A61 297 aa23.71■■□□□ 1.39
HDAC8-206ENST00000373571 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
HDAC8-206ENST00000373571 DAPK1P53355 1430 aa23.69■■□□□ 1.38
HDAC8-206ENST00000373571 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
HDAC8-206ENST00000373571 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
HDAC8-206ENST00000373571 CDK11AQ9UQ88 783 aaPredicted RBP23.67■■□□□ 1.38
HDAC8-206ENST00000373571 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
HDAC8-206ENST00000373571 ROCK1Q13464 1354 aa23.65■■□□□ 1.38
HDAC8-206ENST00000373571 MPHOSPH9Q99550 1183 aa23.63■■□□□ 1.37
HDAC8-206ENST00000373571 ABCC5O15440 1437 aa23.63■■□□□ 1.37
HDAC8-206ENST00000373571 ANP32CO43423 234 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms