RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
PCIF1-201ENST00000372409 FAM50AQ14320 339 aaKnown RBP24.28■■□□□ 1.48
PCIF1-201ENST00000372409 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
PCIF1-201ENST00000372409 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
PCIF1-201ENST00000372409 PHLDB1Q86UU1 1377 aa24.25■■□□□ 1.47
PCIF1-201ENST00000372409 PCF11O94913 1555 aaKnown RBP24.22■■□□□ 1.47
PCIF1-201ENST00000372409 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
PCIF1-201ENST00000372409 FHOD3Q2V2M9 1422 aa24.21■■□□□ 1.47
PCIF1-201ENST00000372409 SETD5Q9C0A6 1442 aa24.2■■□□□ 1.46
PCIF1-201ENST00000372409 NESP48681 1621 aa24.19■■□□□ 1.46
PCIF1-201ENST00000372409 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
PCIF1-201ENST00000372409 TOPBP1Q92547 1522 aa24.18■■□□□ 1.46
PCIF1-201ENST00000372409 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
PCIF1-201ENST00000372409 MAPKBP1O60336 1514 aa24.16■■□□□ 1.46
PCIF1-201ENST00000372409 CFAP43Q8NDM7 1665 aa24.15■■□□□ 1.46
PCIF1-201ENST00000372409 SIN3AQ96ST3 1273 aa24.09■■□□□ 1.45
PCIF1-201ENST00000372409 FYCO1Q9BQS8 1478 aa24.07■■□□□ 1.44
PCIF1-201ENST00000372409 EFCAB5A4FU69 1503 aa24.07■■□□□ 1.44
PCIF1-201ENST00000372409 CUL7Q14999 1698 aa24.06■■□□□ 1.44
PCIF1-201ENST00000372409 CASKIN1Q8WXD9 1431 aa24.05■■□□□ 1.44
PCIF1-201ENST00000372409 CTTNBP2Q8WZ74 1663 aa24.04■■□□□ 1.44
PCIF1-201ENST00000372409 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
PCIF1-201ENST00000372409 TDRD9Q8NDG6 1382 aaKnown RBP23.99■■□□□ 1.43
PCIF1-201ENST00000372409 URB2Q14146 1524 aaKnown RBP23.98■■□□□ 1.43
PCIF1-201ENST00000372409 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.436e-7■■■■■ 41.5
PCIF1-201ENST00000372409 FMN1Q68DA7 1419 aa23.98■■□□□ 1.43
PCIF1-201ENST00000372409 WDR97A6NE52 1622 aa23.97■■□□□ 1.43
PCIF1-201ENST00000372409 MTUS2Q5JR59 1369 aa23.94■■□□□ 1.42
PCIF1-201ENST00000372409 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
PCIF1-201ENST00000372409 DDX10Q13206 875 aaKnown RBP23.91■■□□□ 1.42
PCIF1-201ENST00000372409 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
PCIF1-201ENST00000372409 KCNH8Q96L42 1107 aa23.9■■□□□ 1.42
PCIF1-201ENST00000372409 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
PCIF1-201ENST00000372409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.89■■□□□ 1.41
PCIF1-201ENST00000372409 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
PCIF1-201ENST00000372409 HIRIP3Q9BW71 556 aaPredicted RBP23.87■■□□□ 1.41
PCIF1-201ENST00000372409 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
PCIF1-201ENST00000372409 ABCA5Q8WWZ7 1642 aa23.85■■□□□ 1.41
PCIF1-201ENST00000372409 SUPT16HQ9Y5B9 1047 aaKnown RBP23.83■■□□□ 1.41
PCIF1-201ENST00000372409 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
PCIF1-201ENST00000372409 PPP1R15AO75807 674 aaPredicted RBP23.82■■□□□ 1.4
PCIF1-201ENST00000372409 SAMD9Q5K651 1589 aa23.81■■□□□ 1.4
PCIF1-201ENST00000372409 CCDC18Q5T9S5 1454 aa23.8■■□□□ 1.4
PCIF1-201ENST00000372409 LRRIQ1Q96JM4 1722 aa23.79■■□□□ 1.4
PCIF1-201ENST00000372409 PTPRKQ15262 1439 aa23.78■■□□□ 1.4
PCIF1-201ENST00000372409 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
PCIF1-201ENST00000372409 TONSLQ96HA7 1378 aa23.78■■□□□ 1.4
PCIF1-201ENST00000372409 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
PCIF1-201ENST00000372409 MYOM3Q5VTT5 1437 aa23.75■■□□□ 1.39
PCIF1-201ENST00000372409 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
PCIF1-201ENST00000372409 KIF21AQ7Z4S6 1674 aa23.73■■□□□ 1.39
PCIF1-201ENST00000372409 PTPN23Q9H3S7 1636 aa23.72■■□□□ 1.39
PCIF1-201ENST00000372409 SUPT6HQ7KZ85 1726 aaKnown RBP23.71■■□□□ 1.39
PCIF1-201ENST00000372409 UACAQ9BZF9 1416 aa23.71■■□□□ 1.39
PCIF1-201ENST00000372409 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
PCIF1-201ENST00000372409 NAIPQ13075 1403 aa23.68■■□□□ 1.38
PCIF1-201ENST00000372409 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
PCIF1-201ENST00000372409 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
PCIF1-201ENST00000372409 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
PCIF1-201ENST00000372409 ANP32CO43423 234 aa23.65■■□□□ 1.38
PCIF1-201ENST00000372409 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.37
PCIF1-201ENST00000372409 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
PCIF1-201ENST00000372409 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
PCIF1-201ENST00000372409 UGGT2Q9NYU1 1516 aa23.62■■□□□ 1.37
PCIF1-201ENST00000372409 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
PCIF1-201ENST00000372409 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
PCIF1-201ENST00000372409 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
PCIF1-201ENST00000372409 IQGAP2Q13576 1575 aa23.55■■□□□ 1.36
PCIF1-201ENST00000372409 BCANQ96GW7 911 aa23.54■■□□□ 1.36
PCIF1-201ENST00000372409 ARHGEF11O15085 1522 aa23.54■■□□□ 1.36
PCIF1-201ENST00000372409 CCER2I3L3R5 266 aa23.54■■□□□ 1.36
PCIF1-201ENST00000372409 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
PCIF1-201ENST00000372409 CDK13Q14004 1512 aaKnown RBP23.52■■□□□ 1.36
PCIF1-201ENST00000372409 FKBP8Q14318 412 aa23.5■■□□□ 1.35
PCIF1-201ENST00000372409 ADAMTS12P58397 1594 aa23.49■■□□□ 1.35
PCIF1-201ENST00000372409 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
PCIF1-201ENST00000372409 GCC2Q8IWJ2 1684 aa23.44■■□□□ 1.34
PCIF1-201ENST00000372409 KDM6BO15054 1643 aa23.43■■□□□ 1.34
PCIF1-201ENST00000372409 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
PCIF1-201ENST00000372409 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
PCIF1-201ENST00000372409 MYT1Q01538 1121 aa23.43■■□□□ 1.34
PCIF1-201ENST00000372409 WDR62O43379 1518 aa23.42■■□□□ 1.34
PCIF1-201ENST00000372409 NEFLP07196 543 aa23.41■■□□□ 1.34
PCIF1-201ENST00000372409 TSHZ2Q9NRE2 1034 aa23.41■■□□□ 1.34
PCIF1-201ENST00000372409 FOXD1Q16676 465 aa23.41■■□□□ 1.34
PCIF1-201ENST00000372409 MPHOSPH9Q99550 1183 aa23.41■■□□□ 1.34
PCIF1-201ENST00000372409 MIA2Q96PC5 1412 aa23.41■■□□□ 1.34
PCIF1-201ENST00000372409 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.34
PCIF1-201ENST00000372409 DENND4BO75064 1496 aaPredicted RBP23.39■■□□□ 1.34
PCIF1-201ENST00000372409 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
PCIF1-201ENST00000372409 AKNAQ7Z591 1439 aa23.37■■□□□ 1.33
PCIF1-201ENST00000372409 EIF4G2P78344 907 aaKnown RBP eCLIP23.33■■□□□ 1.33
PCIF1-201ENST00000372409 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
PCIF1-201ENST00000372409 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.33
PCIF1-201ENST00000372409 ZNF644Q9H582 1327 aaPredicted RBP23.31■■□□□ 1.32
PCIF1-201ENST00000372409 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
PCIF1-201ENST00000372409 DAPK1P53355 1430 aa23.29■■□□□ 1.32
PCIF1-201ENST00000372409 KIAA0556O60303 1618 aa23.28■■□□□ 1.32
PCIF1-201ENST00000372409 HNRNPUQ00839 825 aaKnown RBP eCLIP23.28■■□□□ 1.32
PCIF1-201ENST00000372409 KIAA0586Q9BVV6 1533 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms