RNA–Protein interactions for RNA: ENST00000371804.3

IFIT1-201, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFIT1, Length 1,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-201ENST00000371804 PCDH10Q9P2E7 1040 aa8.87□□□□□ -0.99
IFIT1-201ENST00000371804 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
IFIT1-201ENST00000371804 ABCC8Q09428 1581 aa8.87□□□□□ -0.99
IFIT1-201ENST00000371804 DNMBPQ6XZF7 1577 aa8.87□□□□□ -0.99
IFIT1-201ENST00000371804 TARBP1Q13395 1621 aaKnown RBP8.86□□□□□ -0.99
IFIT1-201ENST00000371804 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
IFIT1-201ENST00000371804 ANP32EQ9BTT0 268 aa8.85□□□□□ -0.99
IFIT1-201ENST00000371804 FBLN2P98095 1184 aa8.83□□□□□ -1
IFIT1-201ENST00000371804 POLA1P09884 1462 aaPredicted RBP8.81□□□□□ -1
IFIT1-201ENST00000371804 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
IFIT1-201ENST00000371804 RAD54L2Q9Y4B4 1467 aa8.78□□□□□ -1
IFIT1-201ENST00000371804 PPARGC1BQ86YN6 1023 aaKnown RBP8.78□□□□□ -1
IFIT1-201ENST00000371804 SNAPC4Q5SXM2 1469 aa8.78□□□□□ -1
IFIT1-201ENST00000371804 CHRDL2Q6WN34 429 aa8.77□□□□□ -1.01
IFIT1-201ENST00000371804 TDRD9Q8NDG6 1382 aaKnown RBP8.76□□□□□ -1.01
IFIT1-201ENST00000371804 SYNJ1O43426 1573 aa8.76□□□□□ -1.01
IFIT1-201ENST00000371804 RTN4Q9NQC3 1192 aaKnown RBP8.76□□□□□ -1.01
IFIT1-201ENST00000371804 WDR97A6NE52 1622 aa8.75□□□□□ -1.01
IFIT1-201ENST00000371804 SOGA1O94964 1423 aa8.75□□□□□ -1.01
IFIT1-201ENST00000371804 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
IFIT1-201ENST00000371804 KLHL34Q8N239 644 aa8.74□□□□□ -1.01
IFIT1-201ENST00000371804 MAPK8IP2Q13387 824 aaPredicted RBP8.74□□□□□ -1.01
IFIT1-201ENST00000371804 PKNOX2Q96KN3 472 aa8.74□□□□□ -1.01
IFIT1-201ENST00000371804 EHMT2Q96KQ7 1210 aa8.74□□□□□ -1.01
IFIT1-201ENST00000371804 MAGI1Q96QZ7 1491 aaPredicted RBP8.73□□□□□ -1.01
IFIT1-201ENST00000371804 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
IFIT1-201ENST00000371804 FGD5Q6ZNL6 1462 aa8.72□□□□□ -1.01
IFIT1-201ENST00000371804 GRIN2BQ13224 1484 aa8.71□□□□□ -1.01
IFIT1-201ENST00000371804 SYNJ2O15056 1496 aa8.71□□□□□ -1.02
IFIT1-201ENST00000371804 GAPVD1Q14C86 1478 aa8.71□□□□□ -1.02
IFIT1-201ENST00000371804 TIMELESSQ9UNS1 1208 aa8.69□□□□□ -1.02
IFIT1-201ENST00000371804 PBRM1Q86U86 1689 aa8.69□□□□□ -1.02
IFIT1-201ENST00000371804 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
IFIT1-201ENST00000371804 CUX1P39880 1505 aa8.68□□□□□ -1.02
IFIT1-201ENST00000371804 CSRNP3Q8WYN3 585 aa8.68□□□□□ -1.02
IFIT1-201ENST00000371804 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
IFIT1-201ENST00000371804 NEFLP07196 543 aa8.66□□□□□ -1.02
IFIT1-201ENST00000371804 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
IFIT1-201ENST00000371804 ABCA5Q8WWZ7 1642 aa8.63□□□□□ -1.03
IFIT1-201ENST00000371804 HOMEZQ8IX15 550 aa8.62□□□□□ -1.03
IFIT1-201ENST00000371804 ABCA10Q8WWZ4 1543 aa8.61□□□□□ -1.03
IFIT1-201ENST00000371804 CEP170Q5SW79 1584 aa8.6□□□□□ -1.03
IFIT1-201ENST00000371804 KIF13AQ9H1H9 1805 aa8.6□□□□□ -1.03
IFIT1-201ENST00000371804 PDIA4P13667 645 aaKnown RBP8.6□□□□□ -1.03
IFIT1-201ENST00000371804 GRIN2AQ12879 1464 aa8.6□□□□□ -1.03
IFIT1-201ENST00000371804 ADAMTS12P58397 1594 aa8.58□□□□□ -1.04
IFIT1-201ENST00000371804 SHROOM2Q13796 1616 aa8.58□□□□□ -1.04
IFIT1-201ENST00000371804 NUP160Q12769 1436 aa8.58□□□□□ -1.04
IFIT1-201ENST00000371804 NEUROD1Q13562 356 aa8.57□□□□□ -1.04
IFIT1-201ENST00000371804 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
IFIT1-201ENST00000371804 PDE4CQ08493 712 aa8.56□□□□□ -1.04
IFIT1-201ENST00000371804 ZEB1P37275 1124 aaPredicted RBP8.55□□□□□ -1.04
IFIT1-201ENST00000371804 FHAD1B1AJZ9 1412 aa8.53□□□□□ -1.04
IFIT1-201ENST00000371804 ERICH6BQ5W0A0 696 aa8.51□□□□□ -1.05
IFIT1-201ENST00000371804 WRNQ14191 1432 aaPredicted RBP eCLIP8.51□□□□□ -1.05
IFIT1-201ENST00000371804 PRG4Q92954 1404 aaPredicted RBP8.51□□□□□ -1.05
IFIT1-201ENST00000371804 ABCC10Q5T3U5 1492 aa8.51□□□□□ -1.05
IFIT1-201ENST00000371804 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
IFIT1-201ENST00000371804 BIVM-ERCC5R4GMW8 1640 aa8.49□□□□□ -1.05
IFIT1-201ENST00000371804 DIP2BQ9P265 1576 aa8.49□□□□□ -1.05
IFIT1-201ENST00000371804 POTEMA6NI47 508 aa8.49□□□□□ -1.05
IFIT1-201ENST00000371804 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
IFIT1-201ENST00000371804 AMER1Q5JTC6 1135 aaPredicted RBP8.49□□□□□ -1.05
IFIT1-201ENST00000371804 MAPKBP1O60336 1514 aa8.49□□□□□ -1.05
IFIT1-201ENST00000371804 TOP2BQ02880 1626 aa8.48□□□□□ -1.05
IFIT1-201ENST00000371804 KDM6BO15054 1643 aa8.48□□□□□ -1.05
IFIT1-201ENST00000371804 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
IFIT1-201ENST00000371804 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
IFIT1-201ENST00000371804 RUSC2Q8N2Y8 1516 aa8.47□□□□□ -1.05
IFIT1-201ENST00000371804 ADCY10Q96PN6 1610 aa8.46□□□□□ -1.05
IFIT1-201ENST00000371804 TSPOAP1O95153 1857 aa8.45□□□□□ -1.06
IFIT1-201ENST00000371804 HAX1O00165 279 aa8.45□□□□□ -1.06
IFIT1-201ENST00000371804 NPM1P06748 294 aaKnown RBP eCLIP8.45□□□□□ -1.06
IFIT1-201ENST00000371804 ILDR1Q86SU0 546 aaPredicted RBP8.45□□□□□ -1.06
IFIT1-201ENST00000371804 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
IFIT1-201ENST00000371804 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
IFIT1-201ENST00000371804 DSG3P32926 999 aa8.43□□□□□ -1.06
IFIT1-201ENST00000371804 PCGF6Q9BYE7 350 aa8.43□□□□□ -1.06
IFIT1-201ENST00000371804 TAF7LQ5H9L4 462 aa8.43□□□□□ -1.06
IFIT1-201ENST00000371804 CCDC136Q96JN2 1154 aa8.42□□□□□ -1.06
IFIT1-201ENST00000371804 NPM2Q86SE8 214 aaKnown RBP8.41□□□□□ -1.06
IFIT1-201ENST00000371804 RBM42Q9BTD8 480 aaKnown RBP8.4□□□□□ -1.07
IFIT1-201ENST00000371804 CLSPNQ9HAW4 1339 aa8.39□□□□□ -1.07
IFIT1-201ENST00000371804 POTEGQ6S5H5 508 aa8.38□□□□□ -1.07
IFIT1-201ENST00000371804 FGD1P98174 961 aa8.38□□□□□ -1.07
IFIT1-201ENST00000371804 PPRC1Q5VV67 1664 aaKnown RBP8.37□□□□□ -1.07
IFIT1-201ENST00000371804 KIAA0586Q9BVV6 1533 aa8.37□□□□□ -1.07
IFIT1-201ENST00000371804 BCL11BQ9C0K0 894 aaPredicted RBP8.37□□□□□ -1.07
IFIT1-201ENST00000371804 ADGRL1O94910 1474 aa8.36□□□□□ -1.07
IFIT1-201ENST00000371804 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
IFIT1-201ENST00000371804 GLIPR1L2Q4G1C9 344 aa8.36□□□□□ -1.07
IFIT1-201ENST00000371804 HOXD11P31277 338 aaPredicted RBP8.36□□□□□ -1.07
IFIT1-201ENST00000371804 GLI2P10070 1586 aa8.35□□□□□ -1.07
IFIT1-201ENST00000371804 CUL7Q14999 1698 aa8.34□□□□□ -1.07
IFIT1-201ENST00000371804 PTPRGP23470 1445 aa8.34□□□□□ -1.08
IFIT1-201ENST00000371804 ABCC2Q92887 1545 aa8.33□□□□□ -1.08
IFIT1-201ENST00000371804 HECW2Q9P2P5 1572 aa8.33□□□□□ -1.08
IFIT1-201ENST00000371804 ASXL2Q76L83 1435 aa8.33□□□□□ -1.08
IFIT1-201ENST00000371804 IGF1RP08069 1367 aa8.32□□□□□ -1.08
IFIT1-201ENST00000371804 PLB1Q6P1J6 1458 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms