RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
PDCD11-201ENST00000369797 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
PDCD11-201ENST00000369797 MTUS2Q5JR59 1369 aa15.03■□□□□ -0
PDCD11-201ENST00000369797 NBR1Q14596 966 aa15.02□□□□□ -0.01
PDCD11-201ENST00000369797 IRX6P78412 446 aaPredicted RBP15.01□□□□□ -0.01
PDCD11-201ENST00000369797 RRP7BPQ9NSQ0 103 aa15□□□□□ -0.01
PDCD11-201ENST00000369797 RGL3Q3MIN7 710 aa14.99□□□□□ -0.01
PDCD11-201ENST00000369797 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
PDCD11-201ENST00000369797 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
PDCD11-201ENST00000369797 TULP1O00294 542 aaPredicted RBP14.96□□□□□ -0.02
PDCD11-201ENST00000369797 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
PDCD11-201ENST00000369797 PLEKHD1A6NEE1 506 aa14.9□□□□□ -0.02
PDCD11-201ENST00000369797 EIF4G2P78344 907 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDCD11-201ENST00000369797 TPRNQ4KMQ1 711 aa14.89□□□□□ -0.03
PDCD11-201ENST00000369797 NPHP1O15259 732 aa14.88□□□□□ -0.03
PDCD11-201ENST00000369797 LAS1LQ9Y4W2 734 aaKnown RBP14.86□□□□□ -0.03
PDCD11-201ENST00000369797 TAOK2Q9UL54 1235 aa14.86□□□□□ -0.03
PDCD11-201ENST00000369797 CFAP53Q96M91 514 aa14.85□□□□□ -0.03
PDCD11-201ENST00000369797 NCLP19338 710 aaKnown RBP14.85□□□□□ -0.03
PDCD11-201ENST00000369797 NEUROD2Q15784 382 aa14.84□□□□□ -0.03
PDCD11-201ENST00000369797 KNSTRNQ9Y448 316 aa14.81□□□□□ -0.04
PDCD11-201ENST00000369797 POGKQ9P215 609 aa14.8□□□□□ -0.04
PDCD11-201ENST00000369797 TNNT2P45379 298 aaPredicted RBP14.79□□□□□ -0.04
PDCD11-201ENST00000369797 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
PDCD11-201ENST00000369797 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
PDCD11-201ENST00000369797 ZRSR1Q15695 479 aaKnown RBP14.78□□□□□ -0.04
PDCD11-201ENST00000369797 FTSJ3Q8IY81 847 aaKnown RBP14.78□□□□□ -0.04
PDCD11-201ENST00000369797 MIER1Q8N108 512 aa14.78□□□□□ -0.04
PDCD11-201ENST00000369797 BECN1Q14457 450 aa14.77□□□□□ -0.04
PDCD11-201ENST00000369797 CLIP1P30622 1438 aa14.77□□□□□ -0.05
PDCD11-201ENST00000369797 MAPK8IP3Q9UPT6 1336 aa14.76□□□□□ -0.05
PDCD11-201ENST00000369797 CARD11Q9BXL7 1154 aa14.75□□□□□ -0.05
PDCD11-201ENST00000369797 GLIPR1L2Q4G1C9 344 aa14.74□□□□□ -0.05
PDCD11-201ENST00000369797 CDCA8Q53HL2 280 aa14.74□□□□□ -0.05
PDCD11-201ENST00000369797 GOLGA6L22H0YM25 854 aa14.74□□□□□ -0.05
PDCD11-201ENST00000369797 CASC1Q6TDU7 716 aa14.74□□□□□ -0.05
PDCD11-201ENST00000369797 MLECQ14165 292 aa14.73□□□□□ -0.05
PDCD11-201ENST00000369797 SOX12O15370 315 aa14.73□□□□□ -0.05
PDCD11-201ENST00000369797 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
PDCD11-201ENST00000369797 TRIM44Q96DX7 344 aaPredicted RBP14.72□□□□□ -0.05
PDCD11-201ENST00000369797 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
PDCD11-201ENST00000369797 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
PDCD11-201ENST00000369797 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
PDCD11-201ENST00000369797 U2SURPO15042 1029 aaKnown RBP14.7□□□□□ -0.06
PDCD11-201ENST00000369797 PTMAP06454 111 aaKnown RBP14.7□□□□□ -0.06
PDCD11-201ENST00000369797 FRAT1Q92837 279 aaPredicted RBP14.7□□□□□ -0.06
PDCD11-201ENST00000369797 DDRGK1Q96HY6 314 aa14.7□□□□□ -0.06
PDCD11-201ENST00000369797 NAP1L2Q9ULW6 460 aaPredicted RBP14.68□□□□□ -0.06
PDCD11-201ENST00000369797 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
PDCD11-201ENST00000369797 FGD1P98174 961 aa14.67□□□□□ -0.06
PDCD11-201ENST00000369797 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
PDCD11-201ENST00000369797 RGS3P49796 1198 aa14.64□□□□□ -0.07
PDCD11-201ENST00000369797 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
PDCD11-201ENST00000369797 PLCB2Q00722 1185 aa14.64□□□□□ -0.07
PDCD11-201ENST00000369797 KCNJ4P48050 445 aa14.63□□□□□ -0.07
PDCD11-201ENST00000369797 SAFB2Q14151 953 aaKnown RBP eCLIP14.63□□□□□ -0.07
PDCD11-201ENST00000369797 DNTTIP2Q5QJE6 756 aaKnown RBP14.62□□□□□ -0.07
PDCD11-201ENST00000369797 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
PDCD11-201ENST00000369797 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
PDCD11-201ENST00000369797 SUPT16HQ9Y5B9 1047 aaKnown RBP14.61□□□□□ -0.07
PDCD11-201ENST00000369797 ISY1Q9ULR0 285 aaKnown RBP14.6□□□□□ -0.07
PDCD11-201ENST00000369797 ANP32EQ9BTT0 268 aa14.59□□□□□ -0.07
PDCD11-201ENST00000369797 SRPK2P78362 688 aaKnown RBP14.59□□□□□ -0.07
PDCD11-201ENST00000369797 CLSTN1O94985 981 aa14.58□□□□□ -0.07
PDCD11-201ENST00000369797 SIN3AQ96ST3 1273 aa14.57□□□□□ -0.08
PDCD11-201ENST00000369797 DCAF11Q8TEB1 546 aa14.54□□□□□ -0.08
PDCD11-201ENST00000369797 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
PDCD11-201ENST00000369797 HSP90AB1P08238 724 aaKnown RBP14.54□□□□□ -0.08
PDCD11-201ENST00000369797 STK26Q9P289 416 aa14.54□□□□□ -0.08
PDCD11-201ENST00000369797 CEP162Q5TB80 1403 aa14.53□□□□□ -0.08
PDCD11-201ENST00000369797 HDGFP51858 240 aaKnown RBP14.53□□□□□ -0.08
PDCD11-201ENST00000369797 ZNF330Q9Y3S2 320 aaPredicted RBP14.53□□□□□ -0.08
PDCD11-201ENST00000369797 GGT6Q6P531 493 aa14.52□□□□□ -0.08
PDCD11-201ENST00000369797 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.09
PDCD11-201ENST00000369797 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
PDCD11-201ENST00000369797 CHMP4BQ9H444 224 aaKnown RBP14.51□□□□□ -0.09
PDCD11-201ENST00000369797 KANK1Q14678 1352 aa14.5□□□□□ -0.09
PDCD11-201ENST00000369797 TMF1P82094 1093 aa14.5□□□□□ -0.09
PDCD11-201ENST00000369797 CCNB3Q8WWL7 1395 aa14.5□□□□□ -0.09
PDCD11-201ENST00000369797 KIF27Q86VH2 1401 aa14.49□□□□□ -0.09
PDCD11-201ENST00000369797 MORC1Q86VD1 984 aa14.49□□□□□ -0.09
PDCD11-201ENST00000369797 RTF1Q92541 710 aaKnown RBP14.49□□□□□ -0.09
PDCD11-201ENST00000369797 CSB-PGBD3P0DP91 1061 aa14.48□□□□□ -0.09
PDCD11-201ENST00000369797 GOLGA6L4A6NEF3 574 aa14.48□□□□□ -0.09
PDCD11-201ENST00000369797 APBB1O00213 710 aa14.48□□□□□ -0.09
PDCD11-201ENST00000369797 MS4A1P11836 297 aa14.48□□□□□ -0.09
PDCD11-201ENST00000369797 WRNQ14191 1432 aaPredicted RBP eCLIP14.48□□□□□ -0.09
PDCD11-201ENST00000369797 BAZ1BQ9UIG0 1483 aaKnown RBP14.47□□□□□ -0.09
PDCD11-201ENST00000369797 GOLGA6L6A8MZA4 724 aa14.46□□□□□ -0.09
PDCD11-201ENST00000369797 CCDC9Q9Y3X0 531 aaKnown RBP14.46□□□□□ -0.09
PDCD11-201ENST00000369797 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.09
PDCD11-201ENST00000369797 EIF4G1Q04637 1599 aaKnown RBP14.46□□□□□ -0.1
PDCD11-201ENST00000369797 SPRYD3Q8NCJ5 442 aa14.44□□□□□ -0.1
PDCD11-201ENST00000369797 EEA1Q15075 1411 aa14.42□□□□□ -0.1
PDCD11-201ENST00000369797 B4GALNT3Q6L9W6 998 aa14.41□□□□□ -0.1
PDCD11-201ENST00000369797 GNL2Q13823 731 aaKnown RBP14.41□□□□□ -0.1
PDCD11-201ENST00000369797 NAP1L5Q96NT1 182 aaPredicted RBP14.41□□□□□ -0.1
PDCD11-201ENST00000369797 PPP4R2Q9NY27 417 aa14.41□□□□□ -0.1
PDCD11-201ENST00000369797 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
PDCD11-201ENST00000369797 NRDCO43847 1150 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms