RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 DCAF8L2P0C7V8 631 aa19.88■□□□□ 0.77
PDCD11-201ENST00000369797 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.57
PDCD11-201ENST00000369797 EHMT2Q96KQ7 1210 aa18.37■□□□□ 0.53
PDCD11-201ENST00000369797 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
PDCD11-201ENST00000369797 APLP2Q06481 763 aa17.86■□□□□ 0.45
PDCD11-201ENST00000369797 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
PDCD11-201ENST00000369797 NISCHQ9Y2I1 1504 aa17.76■□□□□ 0.43
PDCD11-201ENST00000369797 TTBK1Q5TCY1 1321 aaPredicted RBP17.71■□□□□ 0.43
PDCD11-201ENST00000369797 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
PDCD11-201ENST00000369797 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
PDCD11-201ENST00000369797 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
PDCD11-201ENST00000369797 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
PDCD11-201ENST00000369797 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
PDCD11-201ENST00000369797 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
PDCD11-201ENST00000369797 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
PDCD11-201ENST00000369797 UBTFP17480 764 aaKnown RBP17.08■□□□□ 0.32
PDCD11-201ENST00000369797 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
PDCD11-201ENST00000369797 MYT1LQ9UL68 1186 aa16.91■□□□□ 0.3
PDCD11-201ENST00000369797 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
PDCD11-201ENST00000369797 NEFLP07196 543 aa16.85■□□□□ 0.29
PDCD11-201ENST00000369797 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
PDCD11-201ENST00000369797 PPARGC1BQ86YN6 1023 aaKnown RBP16.84■□□□□ 0.29
PDCD11-201ENST00000369797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.78■□□□□ 0.28
PDCD11-201ENST00000369797 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
PDCD11-201ENST00000369797 POLR3GLQ9BT43 218 aa16.75■□□□□ 0.27
PDCD11-201ENST00000369797 CHIC1Q5VXU3 224 aa16.7■□□□□ 0.26
PDCD11-201ENST00000369797 ITGAEP38570 1179 aa16.7■□□□□ 0.26
PDCD11-201ENST00000369797 CNGB1Q14028 1251 aaPredicted RBP16.64■□□□□ 0.25
PDCD11-201ENST00000369797 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
PDCD11-201ENST00000369797 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
PDCD11-201ENST00000369797 MYT1Q01538 1121 aa16.41■□□□□ 0.22
PDCD11-201ENST00000369797 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
PDCD11-201ENST00000369797 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
PDCD11-201ENST00000369797 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
PDCD11-201ENST00000369797 HRCP23327 699 aa16.17■□□□□ 0.18
PDCD11-201ENST00000369797 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
PDCD11-201ENST00000369797 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
PDCD11-201ENST00000369797 ZNF316A6NFI3 1004 aaPredicted RBP16.1■□□□□ 0.17
PDCD11-201ENST00000369797 FBLN2P98095 1184 aa16.05■□□□□ 0.16
PDCD11-201ENST00000369797 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
PDCD11-201ENST00000369797 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
PDCD11-201ENST00000369797 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
PDCD11-201ENST00000369797 NEUROD1Q13562 356 aa16.03■□□□□ 0.16
PDCD11-201ENST00000369797 BCL11AQ9H165 835 aa16■□□□□ 0.15
PDCD11-201ENST00000369797 BCANQ96GW7 911 aa15.97■□□□□ 0.15
PDCD11-201ENST00000369797 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
PDCD11-201ENST00000369797 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
PDCD11-201ENST00000369797 DIEXFQ68CQ4 756 aaKnown RBP15.88■□□□□ 0.13
PDCD11-201ENST00000369797 ARID3CA6NKF2 412 aa15.88■□□□□ 0.13
PDCD11-201ENST00000369797 ABCC9O60706 1549 aa15.83■□□□□ 0.12
PDCD11-201ENST00000369797 CANXP27824 592 aaKnown RBP15.79■□□□□ 0.12
PDCD11-201ENST00000369797 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
PDCD11-201ENST00000369797 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
PDCD11-201ENST00000369797 ANP32CO43423 234 aa15.75■□□□□ 0.11
PDCD11-201ENST00000369797 NEFMP07197 916 aa15.75■□□□□ 0.11
PDCD11-201ENST00000369797 ZNF777Q9ULD5 760 aaPredicted RBP15.72■□□□□ 0.11
PDCD11-201ENST00000369797 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
PDCD11-201ENST00000369797 CDK11AQ9UQ88 783 aaPredicted RBP15.62■□□□□ 0.09
PDCD11-201ENST00000369797 CHGAP10645 457 aaKnown RBP15.62■□□□□ 0.09
PDCD11-201ENST00000369797 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
PDCD11-201ENST00000369797 GTF3C3Q9Y5Q9 886 aa15.52■□□□□ 0.08
PDCD11-201ENST00000369797 NPM2Q86SE8 214 aaKnown RBP15.49■□□□□ 0.07
PDCD11-201ENST00000369797 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
PDCD11-201ENST00000369797 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
PDCD11-201ENST00000369797 A0A0G2JS52 829 aa15.41■□□□□ 0.06
PDCD11-201ENST00000369797 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
PDCD11-201ENST00000369797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.053e-6■■■□□ 16.2
PDCD11-201ENST00000369797 ANP32AP39687 249 aaKnown RBP15.39■□□□□ 0.05
PDCD11-201ENST00000369797 HSP90AA1P07900 732 aaKnown RBP15.38■□□□□ 0.05
PDCD11-201ENST00000369797 CSRNP3Q8WYN3 585 aa15.38■□□□□ 0.05
PDCD11-201ENST00000369797 PLEKHG5O94827 1062 aa15.36■□□□□ 0.05
PDCD11-201ENST00000369797 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
PDCD11-201ENST00000369797 CHIC2Q9UKJ5 165 aa15.31■□□□□ 0.04
PDCD11-201ENST00000369797 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
PDCD11-201ENST00000369797 TONSLQ96HA7 1378 aa15.3■□□□□ 0.04
PDCD11-201ENST00000369797 ZBTB7CA1YPR0 619 aa15.29■□□□□ 0.04
PDCD11-201ENST00000369797 ANP32BQ92688 251 aaKnown RBP15.27■□□□□ 0.03
PDCD11-201ENST00000369797 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDCD11-201ENST00000369797 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
PDCD11-201ENST00000369797 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
PDCD11-201ENST00000369797 FKBP8Q14318 412 aa15.23■□□□□ 0.03
PDCD11-201ENST00000369797 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
PDCD11-201ENST00000369797 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
PDCD11-201ENST00000369797 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
PDCD11-201ENST00000369797 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
PDCD11-201ENST00000369797 TSPY4P0CV99 314 aa15.16■□□□□ 0.02
PDCD11-201ENST00000369797 TSPY10P0CW01 314 aa15.16■□□□□ 0.02
PDCD11-201ENST00000369797 ARXQ96QS3 562 aa15.15■□□□□ 0.02
PDCD11-201ENST00000369797 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
PDCD11-201ENST00000369797 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.14■□□□□ 0.01
PDCD11-201ENST00000369797 ACIN1Q9UKV3 1341 aaKnown RBP15.14■□□□□ 0.01
PDCD11-201ENST00000369797 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
PDCD11-201ENST00000369797 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
PDCD11-201ENST00000369797 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
PDCD11-201ENST00000369797 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
PDCD11-201ENST00000369797 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
PDCD11-201ENST00000369797 SCRIBQ14160 1630 aa15.08■□□□□ 0
PDCD11-201ENST00000369797 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
PDCD11-201ENST00000369797 MYH16Q9H6N6 1097 aa15.06■□□□□ 0
PDCD11-201ENST00000369797 MRS2Q9HD23 443 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms