RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 ABCC9O60706 1549 aa16.71■□□□□ 0.26
RAP1A-202ENST00000369709 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
RAP1A-202ENST00000369709 ERICH6BQ5W0A0 696 aa16.67■□□□□ 0.26
RAP1A-202ENST00000369709 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
RAP1A-202ENST00000369709 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
RAP1A-202ENST00000369709 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
RAP1A-202ENST00000369709 EEA1Q15075 1411 aa16.62■□□□□ 0.25
RAP1A-202ENST00000369709 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
RAP1A-202ENST00000369709 IL27Q8NEV9 243 aa16.62■□□□□ 0.25
RAP1A-202ENST00000369709 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
RAP1A-202ENST00000369709 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
RAP1A-202ENST00000369709 CECR2Q9BXF3 1484 aa16.58■□□□□ 0.24
RAP1A-202ENST00000369709 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
RAP1A-202ENST00000369709 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
RAP1A-202ENST00000369709 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
RAP1A-202ENST00000369709 TMC1Q8TDI8 760 aa16.55■□□□□ 0.24
RAP1A-202ENST00000369709 DDRGK1Q96HY6 314 aa16.55■□□□□ 0.24
RAP1A-202ENST00000369709 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
RAP1A-202ENST00000369709 NAP1L5Q96NT1 182 aaPredicted RBP16.54■□□□□ 0.24
RAP1A-202ENST00000369709 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
RAP1A-202ENST00000369709 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
RAP1A-202ENST00000369709 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
RAP1A-202ENST00000369709 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
RAP1A-202ENST00000369709 RAB3GAP2Q9H2M9 1393 aa16.49■□□□□ 0.23
RAP1A-202ENST00000369709 TIMELESSQ9UNS1 1208 aa16.48■□□□□ 0.23
RAP1A-202ENST00000369709 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
RAP1A-202ENST00000369709 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
RAP1A-202ENST00000369709 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
RAP1A-202ENST00000369709 ARID3CA6NKF2 412 aa16.43■□□□□ 0.22
RAP1A-202ENST00000369709 ARID4BQ4LE39 1312 aaPredicted RBP16.42■□□□□ 0.22
RAP1A-202ENST00000369709 PPP1R15AO75807 674 aaPredicted RBP16.4■□□□□ 0.22
RAP1A-202ENST00000369709 HSPA5P11021 654 aaKnown RBP16.4■□□□□ 0.22
RAP1A-202ENST00000369709 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
RAP1A-202ENST00000369709 BRPF3Q9ULD4 1205 aa16.38■□□□□ 0.21
RAP1A-202ENST00000369709 RRP7BPQ9NSQ0 103 aa16.38■□□□□ 0.21
RAP1A-202ENST00000369709 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
RAP1A-202ENST00000369709 RGS3P49796 1198 aa16.35■□□□□ 0.21
RAP1A-202ENST00000369709 GSE1Q14687 1217 aa16.35■□□□□ 0.21
RAP1A-202ENST00000369709 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
RAP1A-202ENST00000369709 WIZO95785 1651 aa16.34■□□□□ 0.21
RAP1A-202ENST00000369709 UPF2Q9HAU5 1272 aaKnown RBP16.32■□□□□ 0.2
RAP1A-202ENST00000369709 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
RAP1A-202ENST00000369709 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
RAP1A-202ENST00000369709 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
RAP1A-202ENST00000369709 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
RAP1A-202ENST00000369709 ANP32BQ92688 251 aaKnown RBP16.29■□□□□ 0.2
RAP1A-202ENST00000369709 TRIM44Q96DX7 344 aaPredicted RBP16.28■□□□□ 0.2
RAP1A-202ENST00000369709 PDE4AP27815 886 aa16.28■□□□□ 0.2
RAP1A-202ENST00000369709 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
RAP1A-202ENST00000369709 NUDCQ9Y266 331 aa16.27■□□□□ 0.2
RAP1A-202ENST00000369709 PKNOX2Q96KN3 472 aa16.27■□□□□ 0.2
RAP1A-202ENST00000369709 BECN1Q14457 450 aa16.26■□□□□ 0.19
RAP1A-202ENST00000369709 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
RAP1A-202ENST00000369709 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
RAP1A-202ENST00000369709 KDM2AQ9Y2K7 1162 aa16.22■□□□□ 0.19
RAP1A-202ENST00000369709 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
RAP1A-202ENST00000369709 GZF1Q9H116 711 aaPredicted RBP16.21■□□□□ 0.19
RAP1A-202ENST00000369709 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
RAP1A-202ENST00000369709 MTUS2Q5JR59 1369 aa16.21■□□□□ 0.18
RAP1A-202ENST00000369709 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.21■□□□□ 0.18
RAP1A-202ENST00000369709 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.18
RAP1A-202ENST00000369709 EXOC6Q8TAG9 804 aa16.2■□□□□ 0.18
RAP1A-202ENST00000369709 SLKQ9H2G2 1235 aaPredicted RBP16.2■□□□□ 0.18
RAP1A-202ENST00000369709 UBE2Q2Q8WVN8 375 aa16.2■□□□□ 0.18
RAP1A-202ENST00000369709 HSP90AA2PQ14568 343 aaPredicted RBP16.19■□□□□ 0.18
RAP1A-202ENST00000369709 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
RAP1A-202ENST00000369709 RCAN3Q9UKA8 241 aa16.18■□□□□ 0.18
RAP1A-202ENST00000369709 FOXD1Q16676 465 aa16.17■□□□□ 0.18
RAP1A-202ENST00000369709 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
RAP1A-202ENST00000369709 PRKRIP1Q9H875 184 aaPredicted RBP16.17■□□□□ 0.18
RAP1A-202ENST00000369709 ARID3AQ99856 593 aa16.16■□□□□ 0.18
RAP1A-202ENST00000369709 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
RAP1A-202ENST00000369709 CCDC184Q52MB2 194 aa16.13■□□□□ 0.17
RAP1A-202ENST00000369709 WDR43Q15061 677 aaKnown RBP eCLIP16.13■□□□□ 0.17
RAP1A-202ENST00000369709 BAZ1AQ9NRL2 1556 aaPredicted RBP16.12■□□□□ 0.17
RAP1A-202ENST00000369709 PLIN1O60240 522 aa16.11■□□□□ 0.17
RAP1A-202ENST00000369709 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
RAP1A-202ENST00000369709 AKNAQ7Z591 1439 aa16.1■□□□□ 0.17
RAP1A-202ENST00000369709 KIF21BO75037 1637 aa16.08■□□□□ 0.16
RAP1A-202ENST00000369709 RRP1P56182 461 aaKnown RBP16.07■□□□□ 0.16
RAP1A-202ENST00000369709 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
RAP1A-202ENST00000369709 GOLGA6L3A6NEY3 463 aa16.06■□□□□ 0.16
RAP1A-202ENST00000369709 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
RAP1A-202ENST00000369709 CARD11Q9BXL7 1154 aa16.04■□□□□ 0.16
RAP1A-202ENST00000369709 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
RAP1A-202ENST00000369709 L3MBTL2Q969R5 705 aa16.04■□□□□ 0.16
RAP1A-202ENST00000369709 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
RAP1A-202ENST00000369709 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
RAP1A-202ENST00000369709 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
RAP1A-202ENST00000369709 CRBNQ96SW2 442 aa16■□□□□ 0.15
RAP1A-202ENST00000369709 TOP2AP11388 1531 aaKnown RBP15.99■□□□□ 0.15
RAP1A-202ENST00000369709 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
RAP1A-202ENST00000369709 FAM43AQ8N2R8 423 aa15.99■□□□□ 0.15
RAP1A-202ENST00000369709 MS4A1P11836 297 aa15.99■□□□□ 0.15
RAP1A-202ENST00000369709 RRBP1Q9P2E9 1410 aaKnown RBP15.96■□□□□ 0.15
RAP1A-202ENST00000369709 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
RAP1A-202ENST00000369709 SKAP1Q86WV1 359 aa15.96■□□□□ 0.15
RAP1A-202ENST00000369709 BACH2Q9BYV9 841 aa15.96■□□□□ 0.15
RAP1A-202ENST00000369709 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
RAP1A-202ENST00000369709 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms