RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 URB2Q14146 1524 aaKnown RBP15.14■□□□□ 0.01
TPM3-209ENST00000368527 ZNF316A6NFI3 1004 aaPredicted RBP15.14■□□□□ 0.01
TPM3-209ENST00000368527 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
TPM3-209ENST00000368527 NESP48681 1621 aa15.14■□□□□ 0.01
TPM3-209ENST00000368527 ABCA5Q8WWZ7 1642 aa15.14■□□□□ 0.01
TPM3-209ENST00000368527 CFAP43Q8NDM7 1665 aa15.13■□□□□ 0.01
TPM3-209ENST00000368527 CTTNBP2Q8WZ74 1663 aa15.13■□□□□ 0.01
TPM3-209ENST00000368527 FMN1Q68DA7 1419 aa15.12■□□□□ 0.01
TPM3-209ENST00000368527 KANK4Q5T7N3 995 aaPredicted RBP15.12■□□□□ 0.01
TPM3-209ENST00000368527 LRRC9Q6ZRR7 1453 aa15.12■□□□□ 0.01
TPM3-209ENST00000368527 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
TPM3-209ENST00000368527 DIEXFQ68CQ4 756 aaKnown RBP15.11■□□□□ 0.01
TPM3-209ENST00000368527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.1■□□□□ 0.013e-7■■□□□ 11.8
TPM3-209ENST00000368527 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
TPM3-209ENST00000368527 THOC2Q8NI27 1593 aaKnown RBP15.07■□□□□ 0
TPM3-209ENST00000368527 DHX57Q6P158 1386 aaKnown RBP15.05■□□□□ -0
TPM3-209ENST00000368527 PCF11O94913 1555 aaKnown RBP15.05■□□□□ -0
TPM3-209ENST00000368527 KIF21AQ7Z4S6 1674 aa15.04■□□□□ -0
TPM3-209ENST00000368527 SAMD9Q5K651 1589 aa15.02■□□□□ -0
TPM3-209ENST00000368527 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
TPM3-209ENST00000368527 CENPBP07199 599 aaPredicted RBP15.01□□□□□ -0.01
TPM3-209ENST00000368527 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
TPM3-209ENST00000368527 FHOD3Q2V2M9 1422 aa14.98□□□□□ -0.01
TPM3-209ENST00000368527 SETD5Q9C0A6 1442 aa14.96□□□□□ -0.01
TPM3-209ENST00000368527 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
TPM3-209ENST00000368527 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
TPM3-209ENST00000368527 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
TPM3-209ENST00000368527 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
TPM3-209ENST00000368527 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
TPM3-209ENST00000368527 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
TPM3-209ENST00000368527 GRIN2BQ13224 1484 aa14.93□□□□□ -0.02
TPM3-209ENST00000368527 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
TPM3-209ENST00000368527 RAB3GAP2Q9H2M9 1393 aa14.91□□□□□ -0.02
TPM3-209ENST00000368527 EHBP1L1Q8N3D4 1523 aa14.91□□□□□ -0.02
TPM3-209ENST00000368527 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
TPM3-209ENST00000368527 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
TPM3-209ENST00000368527 MTUS2Q5JR59 1369 aa14.89□□□□□ -0.03
TPM3-209ENST00000368527 WDR62O43379 1518 aa14.89□□□□□ -0.03
TPM3-209ENST00000368527 IQGAP2Q13576 1575 aa14.88□□□□□ -0.03
TPM3-209ENST00000368527 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
TPM3-209ENST00000368527 HECW1Q76N89 1606 aa14.87□□□□□ -0.03
TPM3-209ENST00000368527 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
TPM3-209ENST00000368527 SUPT6HQ7KZ85 1726 aaKnown RBP14.86□□□□□ -0.03
TPM3-209ENST00000368527 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
TPM3-209ENST00000368527 FAM50AQ14320 339 aaKnown RBP14.84□□□□□ -0.03
TPM3-209ENST00000368527 ATP1B4Q9UN42 357 aaPredicted RBP14.84□□□□□ -0.03
TPM3-209ENST00000368527 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
TPM3-209ENST00000368527 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
TPM3-209ENST00000368527 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
TPM3-209ENST00000368527 MAPKBP1O60336 1514 aa14.8□□□□□ -0.04
TPM3-209ENST00000368527 KIAA0586Q9BVV6 1533 aa14.8□□□□□ -0.04
TPM3-209ENST00000368527 HFM1A2PYH4 1435 aa14.79□□□□□ -0.04
TPM3-209ENST00000368527 ITGAEP38570 1179 aa14.79□□□□□ -0.04
TPM3-209ENST00000368527 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
TPM3-209ENST00000368527 AKNAQ7Z591 1439 aa14.78□□□□□ -0.04
TPM3-209ENST00000368527 TCOF1Q13428 1488 aaKnown RBP14.77□□□□□ -0.04
TPM3-209ENST00000368527 MIA2Q96PC5 1412 aa14.77□□□□□ -0.04
TPM3-209ENST00000368527 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
TPM3-209ENST00000368527 SCAF1Q9H7N4 1312 aaKnown RBP14.74□□□□□ -0.05
TPM3-209ENST00000368527 EPRSP07814 1512 aaKnown RBP14.74□□□□□ -0.05
TPM3-209ENST00000368527 UACAQ9BZF9 1416 aa14.74□□□□□ -0.05
TPM3-209ENST00000368527 PELP1Q8IZL8 1130 aaKnown RBP14.73□□□□□ -0.05
TPM3-209ENST00000368527 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
TPM3-209ENST00000368527 PTPN23Q9H3S7 1636 aa14.72□□□□□ -0.05
TPM3-209ENST00000368527 GRIN2AQ12879 1464 aa14.71□□□□□ -0.05
TPM3-209ENST00000368527 ERCC6Q03468 1493 aa14.7□□□□□ -0.06
TPM3-209ENST00000368527 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
TPM3-209ENST00000368527 KIAA0556O60303 1618 aa14.7□□□□□ -0.06
TPM3-209ENST00000368527 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
TPM3-209ENST00000368527 MIER1Q8N108 512 aa14.69□□□□□ -0.06
TPM3-209ENST00000368527 CDK11AQ9UQ88 783 aaPredicted RBP14.69□□□□□ -0.06
TPM3-209ENST00000368527 SYNJ2O15056 1496 aa14.68□□□□□ -0.06
TPM3-209ENST00000368527 NAIPQ13075 1403 aa14.67□□□□□ -0.06
TPM3-209ENST00000368527 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
TPM3-209ENST00000368527 GCC2Q8IWJ2 1684 aa14.65□□□□□ -0.06
TPM3-209ENST00000368527 DISP1Q96F81 1524 aa14.65□□□□□ -0.06
TPM3-209ENST00000368527 CARMIL2Q6F5E8 1435 aa14.64□□□□□ -0.07
TPM3-209ENST00000368527 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
TPM3-209ENST00000368527 ROCK1Q13464 1354 aa14.63□□□□□ -0.07
TPM3-209ENST00000368527 MAGI3Q5TCQ9 1506 aa14.63□□□□□ -0.07
TPM3-209ENST00000368527 TONSLQ96HA7 1378 aa14.61□□□□□ -0.07
TPM3-209ENST00000368527 PTPRKQ15262 1439 aa14.6□□□□□ -0.07
TPM3-209ENST00000368527 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
TPM3-209ENST00000368527 FOXD1Q16676 465 aa14.6□□□□□ -0.07
TPM3-209ENST00000368527 NUP160Q12769 1436 aa14.59□□□□□ -0.07
TPM3-209ENST00000368527 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
TPM3-209ENST00000368527 CDK13Q14004 1512 aaKnown RBP14.57□□□□□ -0.08
TPM3-209ENST00000368527 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
TPM3-209ENST00000368527 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
TPM3-209ENST00000368527 TROQ12816 1431 aaPredicted RBP14.56□□□□□ -0.08
TPM3-209ENST00000368527 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
TPM3-209ENST00000368527 ADCY10Q96PN6 1610 aa14.55□□□□□ -0.08
TPM3-209ENST00000368527 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
TPM3-209ENST00000368527 DNMT1P26358 1616 aaKnown RBP14.54□□□□□ -0.08
TPM3-209ENST00000368527 SIN3AQ96ST3 1273 aa14.53□□□□□ -0.08
TPM3-209ENST00000368527 DAPK1P53355 1430 aa14.52□□□□□ -0.08
TPM3-209ENST00000368527 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
TPM3-209ENST00000368527 YTHDC1Q96MU7 727 aaKnown RBP14.49□□□□□ -0.09
TPM3-209ENST00000368527 JPH4Q96JJ6 628 aa14.47□□□□□ -0.09
TPM3-209ENST00000368527 ABCC5O15440 1437 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms