RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
SHC1-205ENST00000368453 ATP1B4Q9UN42 357 aaPredicted RBP20.82■□□□□ 0.92
SHC1-205ENST00000368453 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.928e-7■■□□□ 14.4
SHC1-205ENST00000368453 B4GALNT3Q6L9W6 998 aa20.81■□□□□ 0.92
SHC1-205ENST00000368453 ARAP1Q96P48 1450 aa20.78■□□□□ 0.92
SHC1-205ENST00000368453 ANO8Q9HCE9 1232 aaPredicted RBP20.77■□□□□ 0.92
SHC1-205ENST00000368453 MAPKBP1O60336 1514 aa20.75■□□□□ 0.91
SHC1-205ENST00000368453 PPP4R2Q9NY27 417 aa20.75■□□□□ 0.91
SHC1-205ENST00000368453 SETD5Q9C0A6 1442 aa20.75■□□□□ 0.91
SHC1-205ENST00000368453 NOP58Q9Y2X3 529 aaKnown RBP20.73■□□□□ 0.91
SHC1-205ENST00000368453 CUX2O14529 1486 aa20.69■□□□□ 0.9
SHC1-205ENST00000368453 PAK3O75914 559 aaPredicted RBP20.69■□□□□ 0.9
SHC1-205ENST00000368453 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
SHC1-205ENST00000368453 FAM9BQ8IZU0 186 aa20.67■□□□□ 0.9
SHC1-205ENST00000368453 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
SHC1-205ENST00000368453 RTN4Q9NQC3 1192 aaKnown RBP20.65■□□□□ 0.9
SHC1-205ENST00000368453 TIMELESSQ9UNS1 1208 aa20.62■□□□□ 0.89
SHC1-205ENST00000368453 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
SHC1-205ENST00000368453 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
SHC1-205ENST00000368453 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
SHC1-205ENST00000368453 CCDC136Q96JN2 1154 aa20.58■□□□□ 0.89
SHC1-205ENST00000368453 ANP32AP39687 249 aaKnown RBP20.57■□□□□ 0.88
SHC1-205ENST00000368453 ERICH6BQ5W0A0 696 aa20.55■□□□□ 0.88
SHC1-205ENST00000368453 CCDC184Q52MB2 194 aa20.55■□□□□ 0.88
SHC1-205ENST00000368453 ZBTB47Q9UFB7 747 aaPredicted RBP20.54■□□□□ 0.88
SHC1-205ENST00000368453 PRXQ9BXM0 1461 aa20.54■□□□□ 0.88
SHC1-205ENST00000368453 IL27Q8NEV9 243 aa20.52■□□□□ 0.87
SHC1-205ENST00000368453 PHLDB1Q86UU1 1377 aa20.52■□□□□ 0.87
SHC1-205ENST00000368453 SENP3-EIF4A1A0A087X0R7 540 aa20.51■□□□□ 0.87
SHC1-205ENST00000368453 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
SHC1-205ENST00000368453 ARHGAP35Q9NRY4 1499 aa20.5■□□□□ 0.87
SHC1-205ENST00000368453 NPM2Q86SE8 214 aaKnown RBP20.49■□□□□ 0.87
SHC1-205ENST00000368453 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
SHC1-205ENST00000368453 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.48■□□□□ 0.87
SHC1-205ENST00000368453 IPO9Q96P70 1041 aaKnown RBP20.45■□□□□ 0.86
SHC1-205ENST00000368453 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
SHC1-205ENST00000368453 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
SHC1-205ENST00000368453 WASHC2AQ641Q2 1341 aa20.42■□□□□ 0.86
SHC1-205ENST00000368453 TOP2BQ02880 1626 aa20.4■□□□□ 0.86
SHC1-205ENST00000368453 LAS1LQ9Y4W2 734 aaKnown RBP20.39■□□□□ 0.85
SHC1-205ENST00000368453 LRRC9Q6ZRR7 1453 aa20.36■□□□□ 0.85
SHC1-205ENST00000368453 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
SHC1-205ENST00000368453 POLR3GLQ9BT43 218 aa20.35■□□□□ 0.85
SHC1-205ENST00000368453 TIAM1Q13009 1591 aa20.33■□□□□ 0.85
SHC1-205ENST00000368453 PRKRIP1Q9H875 184 aaPredicted RBP20.33■□□□□ 0.84
SHC1-205ENST00000368453 NEFMP07197 916 aa20.33■□□□□ 0.84
SHC1-205ENST00000368453 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
SHC1-205ENST00000368453 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
SHC1-205ENST00000368453 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
SHC1-205ENST00000368453 EIF5BO60841 1220 aaKnown RBP20.28■□□□□ 0.84
SHC1-205ENST00000368453 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
SHC1-205ENST00000368453 C11orf95C9JLR9 678 aaPredicted RBP20.25■□□□□ 0.83
SHC1-205ENST00000368453 CHIC2Q9UKJ5 165 aa20.24■□□□□ 0.83
SHC1-205ENST00000368453 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
SHC1-205ENST00000368453 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
SHC1-205ENST00000368453 RRP7BPQ9NSQ0 103 aa20.23■□□□□ 0.83
SHC1-205ENST00000368453 CNTLNQ9NXG0 1405 aa20.2■□□□□ 0.82
SHC1-205ENST00000368453 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
SHC1-205ENST00000368453 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
SHC1-205ENST00000368453 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
SHC1-205ENST00000368453 CUX1P39880 1505 aa20.17■□□□□ 0.82
SHC1-205ENST00000368453 FOXD1Q16676 465 aa20.16■□□□□ 0.82
SHC1-205ENST00000368453 UACAQ9BZF9 1416 aa20.16■□□□□ 0.82
SHC1-205ENST00000368453 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
SHC1-205ENST00000368453 L3MBTL2Q969R5 705 aa20.14■□□□□ 0.82
SHC1-205ENST00000368453 IGF1RP08069 1367 aa20.14■□□□□ 0.82
SHC1-205ENST00000368453 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
SHC1-205ENST00000368453 BRPF3Q9ULD4 1205 aa20.13■□□□□ 0.81
SHC1-205ENST00000368453 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
SHC1-205ENST00000368453 FHOD3Q2V2M9 1422 aa20.12■□□□□ 0.81
SHC1-205ENST00000368453 MTUS2Q5JR59 1369 aa20.12■□□□□ 0.81
SHC1-205ENST00000368453 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.811e-7■■■■■ 44.6
SHC1-205ENST00000368453 PDE4AP27815 886 aa20.08■□□□□ 0.81
SHC1-205ENST00000368453 PTPRKQ15262 1439 aa20.08■□□□□ 0.8
SHC1-205ENST00000368453 FGD6Q6ZV73 1430 aa20.08■□□□□ 0.8
SHC1-205ENST00000368453 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
SHC1-205ENST00000368453 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
SHC1-205ENST00000368453 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
SHC1-205ENST00000368453 EXOC6Q8TAG9 804 aa20.06■□□□□ 0.8
SHC1-205ENST00000368453 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
SHC1-205ENST00000368453 TMC1Q8TDI8 760 aa20.05■□□□□ 0.8
SHC1-205ENST00000368453 USP35Q9P2H5 1018 aa20.05■□□□□ 0.8
SHC1-205ENST00000368453 PCF11O94913 1555 aaKnown RBP20.05■□□□□ 0.8
SHC1-205ENST00000368453 DAXXQ9UER7 740 aaPredicted RBP20.04■□□□□ 0.8
SHC1-205ENST00000368453 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
SHC1-205ENST00000368453 HFM1A2PYH4 1435 aa20.04■□□□□ 0.8
SHC1-205ENST00000368453 FMN1Q68DA7 1419 aa20.03■□□□□ 0.8
SHC1-205ENST00000368453 NAIPQ13075 1403 aa20.01■□□□□ 0.79
SHC1-205ENST00000368453 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
SHC1-205ENST00000368453 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
SHC1-205ENST00000368453 NBPF8Q3BBV2 869 aa20■□□□□ 0.79
SHC1-205ENST00000368453 NCOA2Q15596 1464 aa20■□□□□ 0.79
SHC1-205ENST00000368453 MPHOSPH9Q99550 1183 aa20■□□□□ 0.79
SHC1-205ENST00000368453 GSE1Q14687 1217 aa19.99■□□□□ 0.79
SHC1-205ENST00000368453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
SHC1-205ENST00000368453 SKAP1Q86WV1 359 aa19.98■□□□□ 0.79
SHC1-205ENST00000368453 UBE2Q2Q8WVN8 375 aa19.98■□□□□ 0.79
SHC1-205ENST00000368453 NCOA1Q15788 1441 aa19.98■□□□□ 0.79
SHC1-205ENST00000368453 PTPN23Q9H3S7 1636 aa19.97■□□□□ 0.79
SHC1-205ENST00000368453 BACH2Q9BYV9 841 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms