RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
NCSTN-202ENST00000368063 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
NCSTN-202ENST00000368063 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
NCSTN-202ENST00000368063 PPP4R2Q9NY27 417 aa18.21■□□□□ 0.51
NCSTN-202ENST00000368063 KIF21BO75037 1637 aa18.21■□□□□ 0.51
NCSTN-202ENST00000368063 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
NCSTN-202ENST00000368063 MAPKBP1O60336 1514 aa18.19■□□□□ 0.5
NCSTN-202ENST00000368063 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
NCSTN-202ENST00000368063 ANP32CO43423 234 aa18.17■□□□□ 0.5
NCSTN-202ENST00000368063 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
NCSTN-202ENST00000368063 HMGXB3Q12766 1538 aa18.16■□□□□ 0.5
NCSTN-202ENST00000368063 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
NCSTN-202ENST00000368063 RRBP1Q9P2E9 1410 aaKnown RBP18.13■□□□□ 0.49
NCSTN-202ENST00000368063 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
NCSTN-202ENST00000368063 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
NCSTN-202ENST00000368063 PKNOX2Q96KN3 472 aa18.11■□□□□ 0.49
NCSTN-202ENST00000368063 WASHC2CQ9Y4E1 1318 aa18.07■□□□□ 0.48
NCSTN-202ENST00000368063 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
NCSTN-202ENST00000368063 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
NCSTN-202ENST00000368063 EIF5BO60841 1220 aaKnown RBP18.04■□□□□ 0.48
NCSTN-202ENST00000368063 ANP32AP39687 249 aaKnown RBP18.04■□□□□ 0.48
NCSTN-202ENST00000368063 ZBTB47Q9UFB7 747 aaPredicted RBP18.03■□□□□ 0.48
NCSTN-202ENST00000368063 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
NCSTN-202ENST00000368063 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
NCSTN-202ENST00000368063 KANK4Q5T7N3 995 aaPredicted RBP17.96■□□□□ 0.46
NCSTN-202ENST00000368063 HIRIP3Q9BW71 556 aaPredicted RBP17.96■□□□□ 0.46
NCSTN-202ENST00000368063 RAPGEF2Q9Y4G8 1499 aa17.95■□□□□ 0.46
NCSTN-202ENST00000368063 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
NCSTN-202ENST00000368063 BRPF3Q9ULD4 1205 aa17.93■□□□□ 0.46
NCSTN-202ENST00000368063 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
NCSTN-202ENST00000368063 ARAP1Q96P48 1450 aa17.9■□□□□ 0.46
NCSTN-202ENST00000368063 SIN3AQ96ST3 1273 aa17.9■□□□□ 0.46
NCSTN-202ENST00000368063 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
NCSTN-202ENST00000368063 NEFMP07197 916 aa17.9■□□□□ 0.46
NCSTN-202ENST00000368063 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
NCSTN-202ENST00000368063 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
NCSTN-202ENST00000368063 RSPH6AQ9H0K4 717 aa17.86■□□□□ 0.45
NCSTN-202ENST00000368063 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
NCSTN-202ENST00000368063 LAS1LQ9Y4W2 734 aaKnown RBP17.82■□□□□ 0.44
NCSTN-202ENST00000368063 CFTRP13569 1480 aa17.82■□□□□ 0.44
NCSTN-202ENST00000368063 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
NCSTN-202ENST00000368063 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
NCSTN-202ENST00000368063 ZBED9Q6R2W3 1325 aa17.78■□□□□ 0.44
NCSTN-202ENST00000368063 PPM1GO15355 546 aaPredicted RBP17.78■□□□□ 0.44
NCSTN-202ENST00000368063 GSE1Q14687 1217 aa17.77■□□□□ 0.44
NCSTN-202ENST00000368063 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
NCSTN-202ENST00000368063 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
NCSTN-202ENST00000368063 CCDC184Q52MB2 194 aa17.72■□□□□ 0.43
NCSTN-202ENST00000368063 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.43
NCSTN-202ENST00000368063 ZMYND15Q9H091 742 aa17.71■□□□□ 0.43
NCSTN-202ENST00000368063 RNF123Q5XPI4 1314 aa17.71■□□□□ 0.43
NCSTN-202ENST00000368063 AKNAQ7Z591 1439 aa17.68■□□□□ 0.42
NCSTN-202ENST00000368063 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
NCSTN-202ENST00000368063 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
NCSTN-202ENST00000368063 SMG6Q86US8 1419 aaKnown RBP17.67■□□□□ 0.42
NCSTN-202ENST00000368063 CUX1P39880 1505 aa17.67■□□□□ 0.42
NCSTN-202ENST00000368063 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
NCSTN-202ENST00000368063 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
NCSTN-202ENST00000368063 FHAD1B1AJZ9 1412 aa17.66■□□□□ 0.42
NCSTN-202ENST00000368063 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
NCSTN-202ENST00000368063 NCOA2Q15596 1464 aa17.65■□□□□ 0.42
NCSTN-202ENST00000368063 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
NCSTN-202ENST00000368063 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
NCSTN-202ENST00000368063 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
NCSTN-202ENST00000368063 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
NCSTN-202ENST00000368063 TONSLQ96HA7 1378 aa17.61■□□□□ 0.41
NCSTN-202ENST00000368063 NFKBIBQ15653 356 aa17.61■□□□□ 0.41
NCSTN-202ENST00000368063 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
NCSTN-202ENST00000368063 KDM5BQ9UGL1 1544 aa17.59■□□□□ 0.41
NCSTN-202ENST00000368063 PDE4AP27815 886 aa17.59■□□□□ 0.41
NCSTN-202ENST00000368063 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.41
NCSTN-202ENST00000368063 BACH2Q9BYV9 841 aa17.58■□□□□ 0.4
NCSTN-202ENST00000368063 DCAF11Q8TEB1 546 aa17.56■□□□□ 0.4
NCSTN-202ENST00000368063 PRKRIP1Q9H875 184 aaPredicted RBP17.56■□□□□ 0.4
NCSTN-202ENST00000368063 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
NCSTN-202ENST00000368063 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
NCSTN-202ENST00000368063 MRS2Q9HD23 443 aa17.56■□□□□ 0.4
NCSTN-202ENST00000368063 TIAM1Q13009 1591 aa17.54■□□□□ 0.4
NCSTN-202ENST00000368063 MAP3K1Q13233 1512 aa17.54■□□□□ 0.4
NCSTN-202ENST00000368063 ARHGAP35Q9NRY4 1499 aa17.52■□□□□ 0.4
NCSTN-202ENST00000368063 PHLDB1Q86UU1 1377 aa17.51■□□□□ 0.39
NCSTN-202ENST00000368063 MS4A1P11836 297 aa17.51■□□□□ 0.39
NCSTN-202ENST00000368063 DDRGK1Q96HY6 314 aa17.51■□□□□ 0.39
NCSTN-202ENST00000368063 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
NCSTN-202ENST00000368063 HSPA5P11021 654 aaKnown RBP17.49■□□□□ 0.39
NCSTN-202ENST00000368063 RRAGDQ9NQL2 400 aaPredicted RBP17.49■□□□□ 0.39
NCSTN-202ENST00000368063 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
NCSTN-202ENST00000368063 LRRC9Q6ZRR7 1453 aa17.46■□□□□ 0.39
NCSTN-202ENST00000368063 RRP9O43818 475 aaKnown RBP17.45■□□□□ 0.38
NCSTN-202ENST00000368063 LAMC3Q9Y6N6 1575 aa17.45■□□□□ 0.38
NCSTN-202ENST00000368063 FANCD2Q9BXW9 1451 aa17.45■□□□□ 0.38
NCSTN-202ENST00000368063 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
NCSTN-202ENST00000368063 HSP90AA2PQ14568 343 aaPredicted RBP17.43■□□□□ 0.38
NCSTN-202ENST00000368063 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
NCSTN-202ENST00000368063 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
NCSTN-202ENST00000368063 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
NCSTN-202ENST00000368063 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
NCSTN-202ENST00000368063 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
NCSTN-202ENST00000368063 UACAQ9BZF9 1416 aa17.39■□□□□ 0.37
NCSTN-202ENST00000368063 FRAT2O75474 233 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms