RNA–Protein interactions for RNA: ENST00000365443.1

RNU1-64P-201, Transcript of RNA, U1 small nuclear 64, pseudogene, humanhuman

BASIC

Gene RNU1-64P, Length 163 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-64P-201ENST00000365443 SOGA1O94964 1423 aa8.01□□□□□ -1.13
RNU1-64P-201ENST00000365443 SCAF1Q9H7N4 1312 aaKnown RBP8.01□□□□□ -1.13
RNU1-64P-201ENST00000365443 POLA1P09884 1462 aaPredicted RBP8□□□□□ -1.13
RNU1-64P-201ENST00000365443 GRIN2BQ13224 1484 aa8□□□□□ -1.13
RNU1-64P-201ENST00000365443 WDR97A6NE52 1622 aa8□□□□□ -1.13
RNU1-64P-201ENST00000365443 RAD54L2Q9Y4B4 1467 aa7.99□□□□□ -1.13
RNU1-64P-201ENST00000365443 TSPOAP1O95153 1857 aa7.96□□□□□ -1.14
RNU1-64P-201ENST00000365443 TOP2AP11388 1531 aaKnown RBP7.95□□□□□ -1.14
RNU1-64P-201ENST00000365443 DIP2BQ9P265 1576 aa7.95□□□□□ -1.14
RNU1-64P-201ENST00000365443 MAPKBP1O60336 1514 aa7.94□□□□□ -1.14
RNU1-64P-201ENST00000365443 CEP170Q5SW79 1584 aa7.94□□□□□ -1.14
RNU1-64P-201ENST00000365443 MAPK8IP2Q13387 824 aaPredicted RBP7.93□□□□□ -1.14
RNU1-64P-201ENST00000365443 CNKSR2Q8WXI2 1034 aa7.91□□□□□ -1.14
RNU1-64P-201ENST00000365443 TOP2BQ02880 1626 aa7.9□□□□□ -1.14
RNU1-64P-201ENST00000365443 NPM3O75607 178 aaKnown RBP7.9□□□□□ -1.14
RNU1-64P-201ENST00000365443 CCDC88BA6NC98 1476 aa7.88□□□□□ -1.15
RNU1-64P-201ENST00000365443 FGD5Q6ZNL6 1462 aa7.87□□□□□ -1.15
RNU1-64P-201ENST00000365443 PRG4Q92954 1404 aaPredicted RBP7.87□□□□□ -1.15
RNU1-64P-201ENST00000365443 PBRM1Q86U86 1689 aa7.87□□□□□ -1.15
RNU1-64P-201ENST00000365443 CERKQ8TCT0 537 aa7.87□□□□□ -1.15
RNU1-64P-201ENST00000365443 GRIN2AQ12879 1464 aa7.87□□□□□ -1.15
RNU1-64P-201ENST00000365443 SHROOM2Q13796 1616 aa7.86□□□□□ -1.15
RNU1-64P-201ENST00000365443 SPATA31D1Q6ZQQ2 1576 aa7.86□□□□□ -1.15
RNU1-64P-201ENST00000365443 NUP160Q12769 1436 aa7.86□□□□□ -1.15
RNU1-64P-201ENST00000365443 JPH4Q96JJ6 628 aa7.85□□□□□ -1.15
RNU1-64P-201ENST00000365443 EHMT2Q96KQ7 1210 aa7.85□□□□□ -1.15
RNU1-64P-201ENST00000365443 SLC4A1APQ9BWU0 796 aaKnown RBP7.84□□□□□ -1.15
RNU1-64P-201ENST00000365443 ADCY10Q96PN6 1610 aa7.8□□□□□ -1.16
RNU1-64P-201ENST00000365443 COL17A1Q9UMD9 1497 aaPredicted RBP7.79□□□□□ -1.16
RNU1-64P-201ENST00000365443 TEX14Q8IWB6 1497 aa7.78□□□□□ -1.16
RNU1-64P-201ENST00000365443 FHAD1B1AJZ9 1412 aa7.77□□□□□ -1.17
RNU1-64P-201ENST00000365443 PPRC1Q5VV67 1664 aaKnown RBP7.76□□□□□ -1.17
RNU1-64P-201ENST00000365443 GLI2P10070 1586 aa7.76□□□□□ -1.17
RNU1-64P-201ENST00000365443 PLB1Q6P1J6 1458 aa7.76□□□□□ -1.17
RNU1-64P-201ENST00000365443 ABCA5Q8WWZ7 1642 aa7.76□□□□□ -1.17
RNU1-64P-201ENST00000365443 ABCA10Q8WWZ4 1543 aa7.76□□□□□ -1.17
RNU1-64P-201ENST00000365443 PCF11O94913 1555 aaKnown RBP7.76□□□□□ -1.17
RNU1-64P-201ENST00000365443 ADAMTS12P58397 1594 aa7.75□□□□□ -1.17
RNU1-64P-201ENST00000365443 PTPRMP28827 1452 aa7.75□□□□□ -1.17
RNU1-64P-201ENST00000365443 CUX1P39880 1505 aa7.74□□□□□ -1.17
RNU1-64P-201ENST00000365443 ASXL2Q76L83 1435 aa7.73□□□□□ -1.17
RNU1-64P-201ENST00000365443 DMRT2Q9Y5R5 561 aa7.73□□□□□ -1.17
RNU1-64P-201ENST00000365443 HSPA2P54652 639 aa7.71□□□□□ -1.18
RNU1-64P-201ENST00000365443 RNF216Q9NWF9 866 aaPredicted RBP7.7□□□□□ -1.18
RNU1-64P-201ENST00000365443 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
RNU1-64P-201ENST00000365443 PTPRGP23470 1445 aa7.69□□□□□ -1.18
RNU1-64P-201ENST00000365443 ABCC2Q92887 1545 aa7.69□□□□□ -1.18
RNU1-64P-201ENST00000365443 KIF21BO75037 1637 aa7.68□□□□□ -1.18
RNU1-64P-201ENST00000365443 MAP3K4Q9Y6R4 1608 aa7.68□□□□□ -1.18
RNU1-64P-201ENST00000365443 KIAA0586Q9BVV6 1533 aa7.68□□□□□ -1.18
RNU1-64P-201ENST00000365443 EPRSP07814 1512 aaKnown RBP7.67□□□□□ -1.18
RNU1-64P-201ENST00000365443 ARID4BQ4LE39 1312 aaPredicted RBP7.66□□□□□ -1.18
RNU1-64P-201ENST00000365443 ERICH3Q5RHP9 1530 aa7.66□□□□□ -1.18
RNU1-64P-201ENST00000365443 ADAMTSL3P82987 1691 aa7.66□□□□□ -1.18
RNU1-64P-201ENST00000365443 WRNQ14191 1432 aaPredicted RBP eCLIP7.65□□□□□ -1.18
RNU1-64P-201ENST00000365443 RUSC2Q8N2Y8 1516 aa7.65□□□□□ -1.18
RNU1-64P-201ENST00000365443 CUL7Q14999 1698 aa7.63□□□□□ -1.19
RNU1-64P-201ENST00000365443 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
RNU1-64P-201ENST00000365443 CD109Q6YHK3 1445 aa7.61□□□□□ -1.19
RNU1-64P-201ENST00000365443 TNIKQ9UKE5 1360 aa7.61□□□□□ -1.19
RNU1-64P-201ENST00000365443 HOXD11P31277 338 aaPredicted RBP7.61□□□□□ -1.19
RNU1-64P-201ENST00000365443 CSRNP3Q8WYN3 585 aa7.6□□□□□ -1.19
RNU1-64P-201ENST00000365443 UHRF1BP1LA0JNW5 1464 aa7.6□□□□□ -1.19
RNU1-64P-201ENST00000365443 UACAQ9BZF9 1416 aa7.6□□□□□ -1.19
RNU1-64P-201ENST00000365443 MADDQ8WXG6 1647 aa7.6□□□□□ -1.19
RNU1-64P-201ENST00000365443 MAGI3Q5TCQ9 1506 aa7.59□□□□□ -1.19
RNU1-64P-201ENST00000365443 BCORL1Q5H9F3 1711 aa7.58□□□□□ -1.2
RNU1-64P-201ENST00000365443 YEATS2Q9ULM3 1422 aa7.58□□□□□ -1.2
RNU1-64P-201ENST00000365443 IQSEC2Q5JU85 1478 aa7.57□□□□□ -1.2
RNU1-64P-201ENST00000365443 KCNH8Q96L42 1107 aa7.57□□□□□ -1.2
RNU1-64P-201ENST00000365443 KDM5BQ9UGL1 1544 aa7.57□□□□□ -1.2
RNU1-64P-201ENST00000365443 RIMS1Q86UR5 1692 aaKnown RBP7.57□□□□□ -1.2
RNU1-64P-201ENST00000365443 WDR7Q9Y4E6 1490 aa7.55□□□□□ -1.2
RNU1-64P-201ENST00000365443 CFAP43Q8NDM7 1665 aa7.55□□□□□ -1.2
RNU1-64P-201ENST00000365443 UBAP1LF5GYI3 381 aa7.55□□□□□ -1.2
RNU1-64P-201ENST00000365443 ARAP3Q8WWN8 1544 aa7.55□□□□□ -1.2
RNU1-64P-201ENST00000365443 PHLDB1Q86UU1 1377 aa7.54□□□□□ -1.2
RNU1-64P-201ENST00000365443 POGZQ7Z3K3 1410 aa7.53□□□□□ -1.2
RNU1-64P-201ENST00000365443 ZCCHC11Q5TAX3 1644 aaKnown RBP7.53□□□□□ -1.2
RNU1-64P-201ENST00000365443 DCAF8L1A6NGE4 600 aa7.52□□□□□ -1.21
RNU1-64P-201ENST00000365443 ZBTB22O15209 634 aa7.52□□□□□ -1.21
RNU1-64P-201ENST00000365443 RAPGEF3O95398 923 aa7.52□□□□□ -1.21
RNU1-64P-201ENST00000365443 MED1Q15648 1581 aaPredicted RBP7.51□□□□□ -1.21
RNU1-64P-201ENST00000365443 PTPRTO14522 1441 aa7.51□□□□□ -1.21
RNU1-64P-201ENST00000365443 PREX1Q8TCU6 1659 aa7.49□□□□□ -1.21
RNU1-64P-201ENST00000365443 LTBP4Q8N2S1 1624 aa7.49□□□□□ -1.21
RNU1-64P-201ENST00000365443 STRCQ7RTU9 1775 aa7.48□□□□□ -1.21
RNU1-64P-201ENST00000365443 FOXD4L1Q9NU39 408 aa7.48□□□□□ -1.21
RNU1-64P-201ENST00000365443 HSPA1LP34931 641 aa7.47□□□□□ -1.21
RNU1-64P-201ENST00000365443 MLECQ14165 292 aa7.47□□□□□ -1.21
RNU1-64P-201ENST00000365443 FANCAO15360 1455 aa7.47□□□□□ -1.21
RNU1-64P-201ENST00000365443 UHRF1BP1Q6BDS2 1440 aa7.46□□□□□ -1.21
RNU1-64P-201ENST00000365443 BIVM-ERCC5R4GMW8 1640 aa7.46□□□□□ -1.21
RNU1-64P-201ENST00000365443 TOM1O60784 492 aa7.44□□□□□ -1.22
RNU1-64P-201ENST00000365443 PIP4K2BP78356 416 aa7.44□□□□□ -1.22
RNU1-64P-201ENST00000365443 AKNAQ7Z591 1439 aa7.44□□□□□ -1.22
RNU1-64P-201ENST00000365443 NEO1Q92859 1461 aa7.43□□□□□ -1.22
RNU1-64P-201ENST00000365443 IQGAP2Q13576 1575 aa7.43□□□□□ -1.22
RNU1-64P-201ENST00000365443 TTC37Q6PGP7 1564 aa7.43□□□□□ -1.22
RNU1-64P-201ENST00000365443 SETD1BQ9UPS6 1966 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms