RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 MIER1Q8N108 512 aa27.59■■■□□ 2.01
NCKAP1-201ENST00000360982 HNRNPUQ00839 825 aaKnown RBP eCLIP27.58■■■□□ 2.01
NCKAP1-201ENST00000360982 FAM9BQ8IZU0 186 aa27.57■■■□□ 2
NCKAP1-201ENST00000360982 C14orf37Q86TY3 774 aa27.57■■■□□ 2
NCKAP1-201ENST00000360982 NPM2Q86SE8 214 aaKnown RBP27.55■■■□□ 2
NCKAP1-201ENST00000360982 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.53■■■□□ 2
NCKAP1-201ENST00000360982 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
NCKAP1-201ENST00000360982 EIF4G2P78344 907 aaKnown RBP eCLIP27.5■■□□□ 1.99
NCKAP1-201ENST00000360982 NBR1Q14596 966 aa27.5■■□□□ 1.99
NCKAP1-201ENST00000360982 GLIPR1L2Q4G1C9 344 aa27.49■■□□□ 1.99
NCKAP1-201ENST00000360982 UPF2Q9HAU5 1272 aaKnown RBP27.46■■□□□ 1.99
NCKAP1-201ENST00000360982 SALL2Q9Y467 1007 aaPredicted RBP27.45■■□□□ 1.98
NCKAP1-201ENST00000360982 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
NCKAP1-201ENST00000360982 CEP162Q5TB80 1403 aa27.43■■□□□ 1.98
NCKAP1-201ENST00000360982 CDCA8Q53HL2 280 aa27.42■■□□□ 1.98
NCKAP1-201ENST00000360982 MRS2Q9HD23 443 aa27.42■■□□□ 1.98
NCKAP1-201ENST00000360982 RGL3Q3MIN7 710 aa27.4■■□□□ 1.98
NCKAP1-201ENST00000360982 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
NCKAP1-201ENST00000360982 A0A0G2JS52 829 aa27.39■■□□□ 1.98
NCKAP1-201ENST00000360982 HSP90AA1P07900 732 aaKnown RBP27.38■■□□□ 1.97
NCKAP1-201ENST00000360982 TNIKQ9UKE5 1360 aa27.35■■□□□ 1.97
NCKAP1-201ENST00000360982 HAP1P54257 671 aaPredicted RBP27.35■■□□□ 1.97
NCKAP1-201ENST00000360982 ZBTB7CA1YPR0 619 aa27.31■■□□□ 1.96
NCKAP1-201ENST00000360982 SENP3Q9H4L4 574 aaPredicted RBP27.28■■□□□ 1.96
NCKAP1-201ENST00000360982 CFAP53Q96M91 514 aa27.28■■□□□ 1.96
NCKAP1-201ENST00000360982 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
NCKAP1-201ENST00000360982 CARMIL1Q5VZK9 1371 aa27.25■■□□□ 1.95
NCKAP1-201ENST00000360982 TRHP20396 242 aaPredicted RBP27.25■■□□□ 1.95
NCKAP1-201ENST00000360982 MYH16Q9H6N6 1097 aa27.25■■□□□ 1.95
NCKAP1-201ENST00000360982 PLEKHG5O94827 1062 aa27.24■■□□□ 1.95
NCKAP1-201ENST00000360982 CCNB3Q8WWL7 1395 aa27.24■■□□□ 1.95
NCKAP1-201ENST00000360982 PDS5BQ9NTI5 1447 aa27.22■■□□□ 1.95
NCKAP1-201ENST00000360982 CCDC136Q96JN2 1154 aa27.21■■□□□ 1.95
NCKAP1-201ENST00000360982 CUX2O14529 1486 aa27.2■■□□□ 1.94
NCKAP1-201ENST00000360982 KNSTRNQ9Y448 316 aa27.18■■□□□ 1.94
NCKAP1-201ENST00000360982 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
NCKAP1-201ENST00000360982 POGKQ9P215 609 aa27.17■■□□□ 1.94
NCKAP1-201ENST00000360982 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
NCKAP1-201ENST00000360982 CARD11Q9BXL7 1154 aa27.16■■□□□ 1.94
NCKAP1-201ENST00000360982 ANP32BQ92688 251 aaKnown RBP27.14■■□□□ 1.94
NCKAP1-201ENST00000360982 HIRIP3Q9BW71 556 aaPredicted RBP27.12■■□□□ 1.93
NCKAP1-201ENST00000360982 KANK1Q14678 1352 aa27.12■■□□□ 1.93
NCKAP1-201ENST00000360982 SUPT16HQ9Y5B9 1047 aaKnown RBP27.11■■□□□ 1.93
NCKAP1-201ENST00000360982 CARMIL2Q6F5E8 1435 aa27.1■■□□□ 1.93
NCKAP1-201ENST00000360982 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
NCKAP1-201ENST00000360982 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
NCKAP1-201ENST00000360982 NUDCQ9Y266 331 aa27.04■■□□□ 1.92
NCKAP1-201ENST00000360982 LMOD2Q6P5Q4 547 aa27.04■■□□□ 1.92
NCKAP1-201ENST00000360982 PPM1GO15355 546 aaPredicted RBP27.04■■□□□ 1.92
NCKAP1-201ENST00000360982 IRX6P78412 446 aaPredicted RBP27.03■■□□□ 1.92
NCKAP1-201ENST00000360982 MLECQ14165 292 aa26.97■■□□□ 1.91
NCKAP1-201ENST00000360982 MAPK8IP3Q9UPT6 1336 aa26.96■■□□□ 1.91
NCKAP1-201ENST00000360982 SOGA1O94964 1423 aa26.94■■□□□ 1.9
NCKAP1-201ENST00000360982 EFCAB2Q5VUJ9 269 aa26.9■■□□□ 1.9
NCKAP1-201ENST00000360982 ARXQ96QS3 562 aa26.9■■□□□ 1.9
NCKAP1-201ENST00000360982 RTN4Q9NQC3 1192 aaKnown RBP26.88■■□□□ 1.89
NCKAP1-201ENST00000360982 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
NCKAP1-201ENST00000360982 GGT6Q6P531 493 aa26.87■■□□□ 1.89
NCKAP1-201ENST00000360982 TMF1P82094 1093 aa26.84■■□□□ 1.89
NCKAP1-201ENST00000360982 PNNQ9H307 717 aaKnown RBP26.83■■□□□ 1.89
NCKAP1-201ENST00000360982 DCAF11Q8TEB1 546 aa26.83■■□□□ 1.89
NCKAP1-201ENST00000360982 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.88
NCKAP1-201ENST00000360982 TIMELESSQ9UNS1 1208 aa26.82■■□□□ 1.88
NCKAP1-201ENST00000360982 DEKP35659 375 aaKnown RBP26.81■■□□□ 1.88
NCKAP1-201ENST00000360982 MROH2BQ7Z745 1585 aa26.79■■□□□ 1.88
NCKAP1-201ENST00000360982 RBM19Q9Y4C8 960 aaKnown RBP26.79■■□□□ 1.88
NCKAP1-201ENST00000360982 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
NCKAP1-201ENST00000360982 SIN3AQ96ST3 1273 aa26.78■■□□□ 1.88
NCKAP1-201ENST00000360982 FMN1Q68DA7 1419 aa26.77■■□□□ 1.88
NCKAP1-201ENST00000360982 FTSJ3Q8IY81 847 aaKnown RBP26.76■■□□□ 1.87
NCKAP1-201ENST00000360982 NEUROD2Q15784 382 aa26.75■■□□□ 1.87
NCKAP1-201ENST00000360982 CHMP4BQ9H444 224 aaKnown RBP26.75■■□□□ 1.87
NCKAP1-201ENST00000360982 SRPK2P78362 688 aaKnown RBP26.74■■□□□ 1.87
NCKAP1-201ENST00000360982 TSHZ2Q9NRE2 1034 aa26.73■■□□□ 1.87
NCKAP1-201ENST00000360982 NOP58Q9Y2X3 529 aaKnown RBP26.72■■□□□ 1.87
NCKAP1-201ENST00000360982 LAS1LQ9Y4W2 734 aaKnown RBP26.72■■□□□ 1.87
NCKAP1-201ENST00000360982 ARHGAP35Q9NRY4 1499 aa26.71■■□□□ 1.87
NCKAP1-201ENST00000360982 U2SURPO15042 1029 aaKnown RBP26.71■■□□□ 1.87
NCKAP1-201ENST00000360982 NPHP1O15259 732 aa26.7■■□□□ 1.87
NCKAP1-201ENST00000360982 TNNT2P45379 298 aaPredicted RBP26.69■■□□□ 1.86
NCKAP1-201ENST00000360982 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
NCKAP1-201ENST00000360982 MS4A1P11836 297 aa26.67■■□□□ 1.86
NCKAP1-201ENST00000360982 PKD2Q13563 968 aa26.66■■□□□ 1.86
NCKAP1-201ENST00000360982 RSPH4AQ5TD94 716 aa26.65■■□□□ 1.86
NCKAP1-201ENST00000360982 BECN1Q14457 450 aa26.65■■□□□ 1.86
NCKAP1-201ENST00000360982 CASC1Q6TDU7 716 aa26.64■■□□□ 1.86
NCKAP1-201ENST00000360982 ERICH6BQ5W0A0 696 aa26.63■■□□□ 1.85
NCKAP1-201ENST00000360982 ANKRD30AQ9BXX3 1397 aa26.62■■□□□ 1.85
NCKAP1-201ENST00000360982 CC2D1BQ5T0F9 858 aaKnown RBP26.61■■□□□ 1.85
NCKAP1-201ENST00000360982 CDK11BP21127 795 aaKnown RBP26.61■■□□□ 1.85
NCKAP1-201ENST00000360982 DDRGK1Q96HY6 314 aa26.6■■□□□ 1.85
NCKAP1-201ENST00000360982 HDGFL2Q7Z4V5 671 aaPredicted RBP26.6■■□□□ 1.85
NCKAP1-201ENST00000360982 SETD5Q9C0A6 1442 aa26.59■■□□□ 1.85
NCKAP1-201ENST00000360982 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
NCKAP1-201ENST00000360982 MORC1Q86VD1 984 aa26.58■■□□□ 1.85
NCKAP1-201ENST00000360982 NCLP19338 710 aaKnown RBP26.58■■□□□ 1.84
NCKAP1-201ENST00000360982 SAFB2Q14151 953 aaKnown RBP eCLIP26.57■■□□□ 1.84
NCKAP1-201ENST00000360982 PPP4R2Q9NY27 417 aa26.56■■□□□ 1.84
NCKAP1-201ENST00000360982 KIF3BO15066 747 aa26.55■■□□□ 1.84
NCKAP1-201ENST00000360982 STK26Q9P289 416 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms