RNA–Protein interactions for RNA: ENST00000360190.8

CDK5RAP2-202, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 5,985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-202ENST00000360190 LAS1LQ9Y4W2 734 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP2-202ENST00000360190 ERICH6BQ5W0A0 696 aa19.59■□□□□ 0.73
CDK5RAP2-202ENST00000360190 ARID3CA6NKF2 412 aa19.58■□□□□ 0.73
CDK5RAP2-202ENST00000360190 B4GALNT3Q6L9W6 998 aa19.58■□□□□ 0.73
CDK5RAP2-202ENST00000360190 CCER2I3L3R5 266 aa19.57■□□□□ 0.72
CDK5RAP2-202ENST00000360190 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
CDK5RAP2-202ENST00000360190 BECN1Q14457 450 aa19.56■□□□□ 0.72
CDK5RAP2-202ENST00000360190 CHIC2Q9UKJ5 165 aa19.56■□□□□ 0.72
CDK5RAP2-202ENST00000360190 ZNF777Q9ULD5 760 aaPredicted RBP19.52■□□□□ 0.71
CDK5RAP2-202ENST00000360190 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.71
CDK5RAP2-202ENST00000360190 SIN3AQ96ST3 1273 aa19.51■□□□□ 0.71
CDK5RAP2-202ENST00000360190 TRIM44Q96DX7 344 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP2-202ENST00000360190 WDR43Q15061 677 aaKnown RBP eCLIP19.49■□□□□ 0.71
CDK5RAP2-202ENST00000360190 NAP1L5Q96NT1 182 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP2-202ENST00000360190 MTUS2Q5JR59 1369 aa19.43■□□□□ 0.7
CDK5RAP2-202ENST00000360190 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
CDK5RAP2-202ENST00000360190 WRNQ14191 1432 aaPredicted RBP eCLIP19.39■□□□□ 0.69
CDK5RAP2-202ENST00000360190 RRP7BPQ9NSQ0 103 aa19.38■□□□□ 0.69
CDK5RAP2-202ENST00000360190 TIMELESSQ9UNS1 1208 aa19.36■□□□□ 0.69
CDK5RAP2-202ENST00000360190 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
CDK5RAP2-202ENST00000360190 KDM2AQ9Y2K7 1162 aa19.36■□□□□ 0.69
CDK5RAP2-202ENST00000360190 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
CDK5RAP2-202ENST00000360190 SOGA1O94964 1423 aa19.31■□□□□ 0.68
CDK5RAP2-202ENST00000360190 IPO9Q96P70 1041 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP2-202ENST00000360190 VPS8Q8N3P4 1428 aa19.28■□□□□ 0.68
CDK5RAP2-202ENST00000360190 GOLGA6L22H0YM25 854 aa19.28■□□□□ 0.68
CDK5RAP2-202ENST00000360190 TNNT2P45379 298 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP2-202ENST00000360190 L1TD1Q5T7N2 865 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP2-202ENST00000360190 RGS3P49796 1198 aa19.25■□□□□ 0.67
CDK5RAP2-202ENST00000360190 SETD5Q9C0A6 1442 aa19.24■□□□□ 0.67
CDK5RAP2-202ENST00000360190 FANCIQ9NVI1 1328 aa19.24■□□□□ 0.67
CDK5RAP2-202ENST00000360190 FBLN2P98095 1184 aa19.22■□□□□ 0.67
CDK5RAP2-202ENST00000360190 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
CDK5RAP2-202ENST00000360190 KCNH8Q96L42 1107 aa19.21■□□□□ 0.67
CDK5RAP2-202ENST00000360190 NCLP19338 710 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP2-202ENST00000360190 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP2-202ENST00000360190 HSPA5P11021 654 aaKnown RBP19.18■□□□□ 0.66
CDK5RAP2-202ENST00000360190 RAB3GAP2Q9H2M9 1393 aa19.14■□□□□ 0.66
CDK5RAP2-202ENST00000360190 CARD11Q9BXL7 1154 aa19.14■□□□□ 0.65
CDK5RAP2-202ENST00000360190 PTMAP06454 111 aaKnown RBP19.13■□□□□ 0.65
CDK5RAP2-202ENST00000360190 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
CDK5RAP2-202ENST00000360190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.654e-7■■■□□ 16.6
CDK5RAP2-202ENST00000360190 MYH16Q9H6N6 1097 aa19.12■□□□□ 0.65
CDK5RAP2-202ENST00000360190 KANK4Q5T7N3 995 aaPredicted RBP19.12■□□□□ 0.65
CDK5RAP2-202ENST00000360190 DNTTIP2Q5QJE6 756 aaKnown RBP19.11■□□□□ 0.65
CDK5RAP2-202ENST00000360190 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
CDK5RAP2-202ENST00000360190 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
CDK5RAP2-202ENST00000360190 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
CDK5RAP2-202ENST00000360190 USP35Q9P2H5 1018 aa19.09■□□□□ 0.65
CDK5RAP2-202ENST00000360190 TSPY4P0CV99 314 aa19.09■□□□□ 0.65
CDK5RAP2-202ENST00000360190 TSPY10P0CW01 314 aa19.09■□□□□ 0.65
CDK5RAP2-202ENST00000360190 CECR2Q9BXF3 1484 aa19.08■□□□□ 0.64
CDK5RAP2-202ENST00000360190 PPP1R15AO75807 674 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP2-202ENST00000360190 NUDCQ9Y266 331 aa19.06■□□□□ 0.64
CDK5RAP2-202ENST00000360190 KNSTRNQ9Y448 316 aa19.06■□□□□ 0.64
CDK5RAP2-202ENST00000360190 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
CDK5RAP2-202ENST00000360190 CHGAP10645 457 aaKnown RBP19.04■□□□□ 0.64
CDK5RAP2-202ENST00000360190 RCAN3Q9UKA8 241 aa19.04■□□□□ 0.64
CDK5RAP2-202ENST00000360190 PNNQ9H307 717 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP2-202ENST00000360190 HSP90AB1P08238 724 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP2-202ENST00000360190 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
CDK5RAP2-202ENST00000360190 FTSJ3Q8IY81 847 aaKnown RBP19.02■□□□□ 0.64
CDK5RAP2-202ENST00000360190 MSNP26038 577 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP2-202ENST00000360190 FHAD1B1AJZ9 1412 aa19.01■□□□□ 0.63
CDK5RAP2-202ENST00000360190 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP2-202ENST00000360190 HSCBQ8IWL3 235 aa19■□□□□ 0.63
CDK5RAP2-202ENST00000360190 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
CDK5RAP2-202ENST00000360190 SPRYD3Q8NCJ5 442 aa18.98■□□□□ 0.63
CDK5RAP2-202ENST00000360190 ARID4BQ4LE39 1312 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP2-202ENST00000360190 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
CDK5RAP2-202ENST00000360190 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
CDK5RAP2-202ENST00000360190 GSE1Q14687 1217 aa18.96■□□□□ 0.63
CDK5RAP2-202ENST00000360190 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
CDK5RAP2-202ENST00000360190 MROH2BQ7Z745 1585 aa18.94■□□□□ 0.62
CDK5RAP2-202ENST00000360190 NACADO15069 1562 aa18.94■□□□□ 0.62
CDK5RAP2-202ENST00000360190 GOLGA6L3A6NEY3 463 aa18.94■□□□□ 0.62
CDK5RAP2-202ENST00000360190 CASC1Q6TDU7 716 aa18.94■□□□□ 0.62
CDK5RAP2-202ENST00000360190 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP2-202ENST00000360190 SLKQ9H2G2 1235 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP2-202ENST00000360190 CFAP53Q96M91 514 aa18.91■□□□□ 0.62
CDK5RAP2-202ENST00000360190 BAZ1BQ9UIG0 1483 aaKnown RBP18.91■□□□□ 0.62
CDK5RAP2-202ENST00000360190 NEUROD2Q15784 382 aa18.91■□□□□ 0.62
CDK5RAP2-202ENST00000360190 PDE4AP27815 886 aa18.9■□□□□ 0.62
CDK5RAP2-202ENST00000360190 HSP90AA2PQ14568 343 aaPredicted RBP18.88■□□□□ 0.61
CDK5RAP2-202ENST00000360190 KTN1Q86UP2 1357 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP2-202ENST00000360190 MS4A1P11836 297 aa18.87■□□□□ 0.61
CDK5RAP2-202ENST00000360190 RALBP1Q15311 655 aa18.87■□□□□ 0.61
CDK5RAP2-202ENST00000360190 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
CDK5RAP2-202ENST00000360190 CDK11BP21127 795 aaKnown RBP18.87■□□□□ 0.61
CDK5RAP2-202ENST00000360190 PTMSP20962 102 aa18.86■□□□□ 0.61
CDK5RAP2-202ENST00000360190 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
CDK5RAP2-202ENST00000360190 CFDP1Q9UEE9 299 aaPredicted RBP18.84■□□□□ 0.61
CDK5RAP2-202ENST00000360190 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
CDK5RAP2-202ENST00000360190 PLCB2Q00722 1185 aa18.83■□□□□ 0.6
CDK5RAP2-202ENST00000360190 TMF1P82094 1093 aa18.82■□□□□ 0.6
CDK5RAP2-202ENST00000360190 VSIG10Q8N0Z9 540 aa18.81■□□□□ 0.6
CDK5RAP2-202ENST00000360190 CHAF1AQ13111 956 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP2-202ENST00000360190 FOXD1Q16676 465 aa18.8■□□□□ 0.6
CDK5RAP2-202ENST00000360190 DCAF11Q8TEB1 546 aa18.8■□□□□ 0.6
CDK5RAP2-202ENST00000360190 PDE3BQ13370 1112 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms