RNA–Protein interactions for RNA: ENST00000360190.8

CDK5RAP2-202, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 5,985 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-202ENST00000360190 NISCHQ9Y2I1 1504 aa24.35■■□□□ 1.49
CDK5RAP2-202ENST00000360190 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
CDK5RAP2-202ENST00000360190 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
CDK5RAP2-202ENST00000360190 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
CDK5RAP2-202ENST00000360190 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
CDK5RAP2-202ENST00000360190 PCGF6Q9BYE7 350 aa23.44■■□□□ 1.34
CDK5RAP2-202ENST00000360190 MYT1Q01538 1121 aa23.15■■□□□ 1.3
CDK5RAP2-202ENST00000360190 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
CDK5RAP2-202ENST00000360190 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
CDK5RAP2-202ENST00000360190 CENPBP07199 599 aaPredicted RBP22.98■■□□□ 1.27
CDK5RAP2-202ENST00000360190 HRCP23327 699 aa22.91■■□□□ 1.26
CDK5RAP2-202ENST00000360190 FAM9AQ8IZU1 332 aaPredicted RBP22.62■■□□□ 1.21
CDK5RAP2-202ENST00000360190 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
CDK5RAP2-202ENST00000360190 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.19
CDK5RAP2-202ENST00000360190 TTBK1Q5TCY1 1321 aaPredicted RBP22.45■■□□□ 1.19
CDK5RAP2-202ENST00000360190 APLP2Q06481 763 aa22.45■■□□□ 1.18
CDK5RAP2-202ENST00000360190 ERICH6Q7L0X2 663 aa22.41■■□□□ 1.18
CDK5RAP2-202ENST00000360190 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
CDK5RAP2-202ENST00000360190 YTHDC1Q96MU7 727 aaKnown RBP22.35■■□□□ 1.17
CDK5RAP2-202ENST00000360190 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
CDK5RAP2-202ENST00000360190 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CDK5RAP2-202ENST00000360190 NEFLP07196 543 aa22.02■■□□□ 1.12
CDK5RAP2-202ENST00000360190 LOC105371045A0A1W2PR82 267 aa21.99■■□□□ 1.11
CDK5RAP2-202ENST00000360190 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
CDK5RAP2-202ENST00000360190 UBTFP17480 764 aaKnown RBP21.77■■□□□ 1.08
CDK5RAP2-202ENST00000360190 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
CDK5RAP2-202ENST00000360190 GTF3C3Q9Y5Q9 886 aa21.74■■□□□ 1.07
CDK5RAP2-202ENST00000360190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
CDK5RAP2-202ENST00000360190 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
CDK5RAP2-202ENST00000360190 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.01
CDK5RAP2-202ENST00000360190 ATP1B4Q9UN42 357 aaPredicted RBP21.35■■□□□ 1.01
CDK5RAP2-202ENST00000360190 SCAF1Q9H7N4 1312 aaKnown RBP21.27■■□□□ 1
CDK5RAP2-202ENST00000360190 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
CDK5RAP2-202ENST00000360190 DCAF1Q9Y4B6 1507 aa21.19■□□□□ 0.98
CDK5RAP2-202ENST00000360190 BCANQ96GW7 911 aa21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 DAXXQ9UER7 740 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 RTL5Q5HYW3 569 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 ITGAEP38570 1179 aa21.15■□□□□ 0.98
CDK5RAP2-202ENST00000360190 NEUROD1Q13562 356 aa21.08■□□□□ 0.97
CDK5RAP2-202ENST00000360190 CDK11AQ9UQ88 783 aaPredicted RBP20.95■□□□□ 0.94
CDK5RAP2-202ENST00000360190 CLSPNQ9HAW4 1339 aa20.94■□□□□ 0.94
CDK5RAP2-202ENST00000360190 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
CDK5RAP2-202ENST00000360190 ANP32CO43423 234 aa20.79■□□□□ 0.92
CDK5RAP2-202ENST00000360190 MYO15BQ96JP2 1530 aa20.78■□□□□ 0.92
CDK5RAP2-202ENST00000360190 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
CDK5RAP2-202ENST00000360190 FKBP8Q14318 412 aa20.68■□□□□ 0.9
CDK5RAP2-202ENST00000360190 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
CDK5RAP2-202ENST00000360190 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
CDK5RAP2-202ENST00000360190 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.88
CDK5RAP2-202ENST00000360190 MIER1Q8N108 512 aa20.56■□□□□ 0.88
CDK5RAP2-202ENST00000360190 ANP32AP39687 249 aaKnown RBP20.55■□□□□ 0.88
CDK5RAP2-202ENST00000360190 ANP32EQ9BTT0 268 aa20.52■□□□□ 0.88
CDK5RAP2-202ENST00000360190 CSRNP3Q8WYN3 585 aa20.39■□□□□ 0.85
CDK5RAP2-202ENST00000360190 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
CDK5RAP2-202ENST00000360190 ZCCHC6Q5VYS8 1495 aaKnown RBP20.36■□□□□ 0.85
CDK5RAP2-202ENST00000360190 EIF5BO60841 1220 aaKnown RBP20.36■□□□□ 0.85
CDK5RAP2-202ENST00000360190 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.84
CDK5RAP2-202ENST00000360190 NBR1Q14596 966 aa20.31■□□□□ 0.84
CDK5RAP2-202ENST00000360190 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
CDK5RAP2-202ENST00000360190 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.84
CDK5RAP2-202ENST00000360190 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
CDK5RAP2-202ENST00000360190 ZBTB47Q9UFB7 747 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP2-202ENST00000360190 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
CDK5RAP2-202ENST00000360190 GLIPR1L2Q4G1C9 344 aa20.13■□□□□ 0.81
CDK5RAP2-202ENST00000360190 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP2-202ENST00000360190 IRX6P78412 446 aaPredicted RBP20.09■□□□□ 0.81
CDK5RAP2-202ENST00000360190 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
CDK5RAP2-202ENST00000360190 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
CDK5RAP2-202ENST00000360190 CCDC136Q96JN2 1154 aa20.07■□□□□ 0.8
CDK5RAP2-202ENST00000360190 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP2-202ENST00000360190 CANXP27824 592 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP2-202ENST00000360190 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
CDK5RAP2-202ENST00000360190 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
CDK5RAP2-202ENST00000360190 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
CDK5RAP2-202ENST00000360190 HIRIP3Q9BW71 556 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP2-202ENST00000360190 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
CDK5RAP2-202ENST00000360190 CLIP1P30622 1438 aa19.86■□□□□ 0.77
CDK5RAP2-202ENST00000360190 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP2-202ENST00000360190 ABCC9O60706 1549 aa19.85■□□□□ 0.77
CDK5RAP2-202ENST00000360190 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP2-202ENST00000360190 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.772e-6■□□□□ 9.6
CDK5RAP2-202ENST00000360190 TSHZ2Q9NRE2 1034 aa19.83■□□□□ 0.76
CDK5RAP2-202ENST00000360190 NOP58Q9Y2X3 529 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP2-202ENST00000360190 DDRGK1Q96HY6 314 aa19.8■□□□□ 0.76
CDK5RAP2-202ENST00000360190 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
CDK5RAP2-202ENST00000360190 DEKP35659 375 aaKnown RBP19.79■□□□□ 0.76
CDK5RAP2-202ENST00000360190 PPP4R2Q9NY27 417 aa19.78■□□□□ 0.76
CDK5RAP2-202ENST00000360190 GOLGA3Q08378 1498 aa19.78■□□□□ 0.76
CDK5RAP2-202ENST00000360190 TMC1Q8TDI8 760 aa19.78■□□□□ 0.76
CDK5RAP2-202ENST00000360190 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP2-202ENST00000360190 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
CDK5RAP2-202ENST00000360190 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
CDK5RAP2-202ENST00000360190 TNIKQ9UKE5 1360 aa19.75■□□□□ 0.75
CDK5RAP2-202ENST00000360190 EEA1Q15075 1411 aa19.74■□□□□ 0.75
CDK5RAP2-202ENST00000360190 ARXQ96QS3 562 aa19.73■□□□□ 0.75
CDK5RAP2-202ENST00000360190 PPM1GO15355 546 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP2-202ENST00000360190 NEFMP07197 916 aa19.69■□□□□ 0.74
CDK5RAP2-202ENST00000360190 HSP90AA1P07900 732 aaKnown RBP19.67■□□□□ 0.74
CDK5RAP2-202ENST00000360190 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP2-202ENST00000360190 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.748e-7■■■■■ 28.7
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms