RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
CCL20-201ENST00000358813 GSE1Q14687 1217 aa12.01□□□□□ -0.49
CCL20-201ENST00000358813 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
CCL20-201ENST00000358813 EVX2Q03828 476 aa11.95□□□□□ -0.5
CCL20-201ENST00000358813 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
CCL20-201ENST00000358813 PYGBP11216 843 aa11.88□□□□□ -0.51
CCL20-201ENST00000358813 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
CCL20-201ENST00000358813 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
CCL20-201ENST00000358813 NISCHQ9Y2I1 1504 aa11.87□□□□□ -0.51
CCL20-201ENST00000358813 PKD2Q13563 968 aa11.86□□□□□ -0.51
CCL20-201ENST00000358813 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
CCL20-201ENST00000358813 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
CCL20-201ENST00000358813 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
CCL20-201ENST00000358813 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
CCL20-201ENST00000358813 MAP3K13O43283 966 aa11.79□□□□□ -0.52
CCL20-201ENST00000358813 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
CCL20-201ENST00000358813 CLCN6P51797 869 aa11.77□□□□□ -0.53
CCL20-201ENST00000358813 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
CCL20-201ENST00000358813 GABBR2O75899 941 aa11.74□□□□□ -0.53
CCL20-201ENST00000358813 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
CCL20-201ENST00000358813 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
CCL20-201ENST00000358813 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
CCL20-201ENST00000358813 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
CCL20-201ENST00000358813 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
CCL20-201ENST00000358813 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
CCL20-201ENST00000358813 RGL2O15211 777 aa11.7□□□□□ -0.54
CCL20-201ENST00000358813 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
CCL20-201ENST00000358813 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
CCL20-201ENST00000358813 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
CCL20-201ENST00000358813 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
CCL20-201ENST00000358813 TAOK2Q9UL54 1235 aa11.63□□□□□ -0.55
CCL20-201ENST00000358813 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
CCL20-201ENST00000358813 TRPC6Q9Y210 931 aa11.61□□□□□ -0.55
CCL20-201ENST00000358813 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
CCL20-201ENST00000358813 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
CCL20-201ENST00000358813 PSEN1P49768 467 aa11.59□□□□□ -0.55
CCL20-201ENST00000358813 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
CCL20-201ENST00000358813 TIE1P35590 1138 aa11.57□□□□□ -0.56
CCL20-201ENST00000358813 BCANQ96GW7 911 aa11.56□□□□□ -0.56
CCL20-201ENST00000358813 TMEM106CQ9BVX2 250 aa11.56□□□□□ -0.56
CCL20-201ENST00000358813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
CCL20-201ENST00000358813 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
CCL20-201ENST00000358813 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
CCL20-201ENST00000358813 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
CCL20-201ENST00000358813 STK25O00506 426 aa11.51□□□□□ -0.57
CCL20-201ENST00000358813 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
CCL20-201ENST00000358813 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
CCL20-201ENST00000358813 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
CCL20-201ENST00000358813 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
CCL20-201ENST00000358813 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
CCL20-201ENST00000358813 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
CCL20-201ENST00000358813 GOLGA2Q08379 1002 aa11.47□□□□□ -0.57
CCL20-201ENST00000358813 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
CCL20-201ENST00000358813 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CCL20-201ENST00000358813 TRIM35Q9UPQ4 493 aa11.46□□□□□ -0.57
CCL20-201ENST00000358813 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
CCL20-201ENST00000358813 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
CCL20-201ENST00000358813 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
CCL20-201ENST00000358813 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
CCL20-201ENST00000358813 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
CCL20-201ENST00000358813 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
CCL20-201ENST00000358813 SLC39A7Q92504 469 aa11.36□□□□□ -0.59
CCL20-201ENST00000358813 IER5LQ5T953 404 aa11.35□□□□□ -0.59
CCL20-201ENST00000358813 C7P10643 843 aa11.34□□□□□ -0.59
CCL20-201ENST00000358813 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
CCL20-201ENST00000358813 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
CCL20-201ENST00000358813 SOX12O15370 315 aa11.32□□□□□ -0.6
CCL20-201ENST00000358813 SEC24BO95487 1268 aa11.31□□□□□ -0.6
CCL20-201ENST00000358813 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
CCL20-201ENST00000358813 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
CCL20-201ENST00000358813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCL20-201ENST00000358813 PLCG2P16885 1265 aa11.28□□□□□ -0.6
CCL20-201ENST00000358813 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
CCL20-201ENST00000358813 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
CCL20-201ENST00000358813 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
CCL20-201ENST00000358813 OCEL1Q9H607 264 aa11.27□□□□□ -0.61
CCL20-201ENST00000358813 NLRP6P59044 892 aa11.26□□□□□ -0.61
CCL20-201ENST00000358813 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
CCL20-201ENST00000358813 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
CCL20-201ENST00000358813 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
CCL20-201ENST00000358813 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
CCL20-201ENST00000358813 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
CCL20-201ENST00000358813 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
CCL20-201ENST00000358813 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
CCL20-201ENST00000358813 TPRNQ4KMQ1 711 aa11.2□□□□□ -0.62
CCL20-201ENST00000358813 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
CCL20-201ENST00000358813 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
CCL20-201ENST00000358813 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
CCL20-201ENST00000358813 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
CCL20-201ENST00000358813 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
CCL20-201ENST00000358813 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
CCL20-201ENST00000358813 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
CCL20-201ENST00000358813 G3V3G9 751 aa11.14□□□□□ -0.63
CCL20-201ENST00000358813 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
CCL20-201ENST00000358813 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
CCL20-201ENST00000358813 PPP1R37O75864 691 aa11.11□□□□□ -0.63
CCL20-201ENST00000358813 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
CCL20-201ENST00000358813 LHX8Q68G74 356 aa11.08□□□□□ -0.64
CCL20-201ENST00000358813 ABCC9O60706 1549 aa11.08□□□□□ -0.64
CCL20-201ENST00000358813 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms