RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 FHAD1B1AJZ9 1412 aa26.03■■□□□ 1.76
CDK11A-204ENST00000358779 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.76
CDK11A-204ENST00000358779 ITGAEP38570 1179 aa26■■□□□ 1.75
CDK11A-204ENST00000358779 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
CDK11A-204ENST00000358779 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
CDK11A-204ENST00000358779 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
CDK11A-204ENST00000358779 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
CDK11A-204ENST00000358779 CUL7Q14999 1698 aa25.97■■□□□ 1.75
CDK11A-204ENST00000358779 PHLDB1Q86UU1 1377 aa25.94■■□□□ 1.74
CDK11A-204ENST00000358779 CTTNBP2Q8WZ74 1663 aa25.94■■□□□ 1.74
CDK11A-204ENST00000358779 EFCAB5A4FU69 1503 aa25.94■■□□□ 1.74
CDK11A-204ENST00000358779 MAPKBP1O60336 1514 aa25.93■■□□□ 1.74
CDK11A-204ENST00000358779 NESP48681 1621 aa25.91■■□□□ 1.74
CDK11A-204ENST00000358779 FYCO1Q9BQS8 1478 aa25.89■■□□□ 1.73
CDK11A-204ENST00000358779 FHOD3Q2V2M9 1422 aa25.88■■□□□ 1.73
CDK11A-204ENST00000358779 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
CDK11A-204ENST00000358779 WDR97A6NE52 1622 aa25.87■■□□□ 1.73
CDK11A-204ENST00000358779 P3H3Q8IVL6 736 aa25.86■■□□□ 1.73
CDK11A-204ENST00000358779 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.733e-7■■■□□ 15.1
CDK11A-204ENST00000358779 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
CDK11A-204ENST00000358779 LAMC3Q9Y6N6 1575 aa25.8■■□□□ 1.72
CDK11A-204ENST00000358779 FAM50AQ14320 339 aaKnown RBP25.79■■□□□ 1.72
CDK11A-204ENST00000358779 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
CDK11A-204ENST00000358779 ATP1B4Q9UN42 357 aaPredicted RBP25.76■■□□□ 1.71
CDK11A-204ENST00000358779 ABCA5Q8WWZ7 1642 aa25.74■■□□□ 1.71
CDK11A-204ENST00000358779 FMN1Q68DA7 1419 aa25.72■■□□□ 1.71
CDK11A-204ENST00000358779 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.71■■□□□ 1.71
CDK11A-204ENST00000358779 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
CDK11A-204ENST00000358779 SAMD9Q5K651 1589 aa25.69■■□□□ 1.7
CDK11A-204ENST00000358779 LRRIQ1Q96JM4 1722 aa25.63■■□□□ 1.69
CDK11A-204ENST00000358779 FGD6Q6ZV73 1430 aa25.62■■□□□ 1.69
CDK11A-204ENST00000358779 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
CDK11A-204ENST00000358779 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
CDK11A-204ENST00000358779 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
CDK11A-204ENST00000358779 THOC2Q8NI27 1593 aaKnown RBP25.57■■□□□ 1.68
CDK11A-204ENST00000358779 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
CDK11A-204ENST00000358779 PDS5BQ9NTI5 1447 aa25.57■■□□□ 1.68
CDK11A-204ENST00000358779 MTUS2Q5JR59 1369 aa25.56■■□□□ 1.68
CDK11A-204ENST00000358779 GRIN2BQ13224 1484 aa25.55■■□□□ 1.68
CDK11A-204ENST00000358779 TIMELESSQ9UNS1 1208 aa25.54■■□□□ 1.68
CDK11A-204ENST00000358779 SUPT6HQ7KZ85 1726 aaKnown RBP25.51■■□□□ 1.67
CDK11A-204ENST00000358779 CCDC18Q5T9S5 1454 aa25.5■■□□□ 1.67
CDK11A-204ENST00000358779 EHBP1L1Q8N3D4 1523 aa25.49■■□□□ 1.67
CDK11A-204ENST00000358779 TARBP1Q13395 1621 aaKnown RBP25.49■■□□□ 1.67
CDK11A-204ENST00000358779 NCOA2Q15596 1464 aa25.49■■□□□ 1.67
CDK11A-204ENST00000358779 PTPN23Q9H3S7 1636 aa25.49■■□□□ 1.67
CDK11A-204ENST00000358779 HFM1A2PYH4 1435 aa25.47■■□□□ 1.67
CDK11A-204ENST00000358779 MYOM3Q5VTT5 1437 aa25.46■■□□□ 1.67
CDK11A-204ENST00000358779 PTPRKQ15262 1439 aa25.45■■□□□ 1.66
CDK11A-204ENST00000358779 PBRM1Q86U86 1689 aa25.44■■□□□ 1.66
CDK11A-204ENST00000358779 UACAQ9BZF9 1416 aa25.41■■□□□ 1.66
CDK11A-204ENST00000358779 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
CDK11A-204ENST00000358779 UGGT2Q9NYU1 1516 aa25.4■■□□□ 1.66
CDK11A-204ENST00000358779 ARHGEF11O15085 1522 aa25.39■■□□□ 1.65
CDK11A-204ENST00000358779 NAIPQ13075 1403 aa25.37■■□□□ 1.65
CDK11A-204ENST00000358779 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
CDK11A-204ENST00000358779 MAGI3Q5TCQ9 1506 aa25.37■■□□□ 1.65
CDK11A-204ENST00000358779 HECW1Q76N89 1606 aa25.37■■□□□ 1.65
CDK11A-204ENST00000358779 KCNH8Q96L42 1107 aa25.36■■□□□ 1.65
CDK11A-204ENST00000358779 SUPT16HQ9Y5B9 1047 aaKnown RBP25.36■■□□□ 1.65
CDK11A-204ENST00000358779 DNAJC5BQ9UF47 199 aa25.35■■□□□ 1.65
CDK11A-204ENST00000358779 TONSLQ96HA7 1378 aa25.34■■□□□ 1.65
CDK11A-204ENST00000358779 IQGAP2Q13576 1575 aa25.33■■□□□ 1.65
CDK11A-204ENST00000358779 ADAMTS12P58397 1594 aa25.33■■□□□ 1.65
CDK11A-204ENST00000358779 GCC2Q8IWJ2 1684 aa25.29■■□□□ 1.64
CDK11A-204ENST00000358779 TCOF1Q13428 1488 aaKnown RBP25.29■■□□□ 1.64
CDK11A-204ENST00000358779 HIRIP3Q9BW71 556 aaPredicted RBP25.25■■□□□ 1.63
CDK11A-204ENST00000358779 EPRSP07814 1512 aaKnown RBP25.24■■□□□ 1.63
CDK11A-204ENST00000358779 WDR62O43379 1518 aa25.22■■□□□ 1.63
CDK11A-204ENST00000358779 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
CDK11A-204ENST00000358779 KDM5BQ9UGL1 1544 aa25.21■■□□□ 1.63
CDK11A-204ENST00000358779 CDK13Q14004 1512 aaKnown RBP25.19■■□□□ 1.62
CDK11A-204ENST00000358779 AKNAQ7Z591 1439 aa25.19■■□□□ 1.62
CDK11A-204ENST00000358779 CCER2I3L3R5 266 aa25.16■■□□□ 1.62
CDK11A-204ENST00000358779 MIA2Q96PC5 1412 aa25.14■■□□□ 1.62
CDK11A-204ENST00000358779 ANP32CO43423 234 aa25.14■■□□□ 1.62
CDK11A-204ENST00000358779 RRP7BPQ9NSQ0 103 aa25.14■■□□□ 1.61
CDK11A-204ENST00000358779 KDM6BO15054 1643 aa25.14■■□□□ 1.61
CDK11A-204ENST00000358779 CHIC2Q9UKJ5 165 aa25.11■■□□□ 1.61
CDK11A-204ENST00000358779 DENND4BO75064 1496 aaPredicted RBP25.11■■□□□ 1.61
CDK11A-204ENST00000358779 KIAA0556O60303 1618 aa25.07■■□□□ 1.6
CDK11A-204ENST00000358779 IFT140Q96RY7 1462 aa25.07■■□□□ 1.6
CDK11A-204ENST00000358779 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
CDK11A-204ENST00000358779 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
CDK11A-204ENST00000358779 KIAA0586Q9BVV6 1533 aa25.02■■□□□ 1.6
CDK11A-204ENST00000358779 DISP1Q96F81 1524 aa25.01■■□□□ 1.59
CDK11A-204ENST00000358779 ARID3CA6NKF2 412 aa25.01■■□□□ 1.59
CDK11A-204ENST00000358779 MYT1Q01538 1121 aa25■■□□□ 1.59
CDK11A-204ENST00000358779 DNMT1P26358 1616 aaKnown RBP25■■□□□ 1.59
CDK11A-204ENST00000358779 RAPGEF6Q8TEU7 1601 aa24.99■■□□□ 1.59
CDK11A-204ENST00000358779 DAPK1P53355 1430 aa24.98■■□□□ 1.59
CDK11A-204ENST00000358779 NUP153P49790 1475 aaKnown RBP24.96■■□□□ 1.59
CDK11A-204ENST00000358779 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.59
CDK11A-204ENST00000358779 MPHOSPH9Q99550 1183 aa24.95■■□□□ 1.59
CDK11A-204ENST00000358779 ROCK1Q13464 1354 aa24.95■■□□□ 1.58
CDK11A-204ENST00000358779 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
CDK11A-204ENST00000358779 FKBP8Q14318 412 aa24.93■■□□□ 1.58
CDK11A-204ENST00000358779 HSPA5P11021 654 aaKnown RBP24.92■■□□□ 1.58
CDK11A-204ENST00000358779 TSHZ2Q9NRE2 1034 aa24.91■■□□□ 1.58
CDK11A-204ENST00000358779 ABCC5O15440 1437 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms