RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ZRSR1Q15695 479 aaKnown RBP15.18■□□□□ 0.02
SPTBN1-202ENST00000356805 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
SPTBN1-202ENST00000356805 DDX10Q13206 875 aaKnown RBP15.17■□□□□ 0.02
SPTBN1-202ENST00000356805 CCDC180Q9P1Z9 1646 aa15.16■□□□□ 0.02
SPTBN1-202ENST00000356805 IRX6P78412 446 aaPredicted RBP15.15■□□□□ 0.02
SPTBN1-202ENST00000356805 DNTTIP2Q5QJE6 756 aaKnown RBP15.15■□□□□ 0.02
SPTBN1-202ENST00000356805 PTMAP06454 111 aaKnown RBP15.14■□□□□ 0.01
SPTBN1-202ENST00000356805 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
SPTBN1-202ENST00000356805 GOLGA6L22H0YM25 854 aa15.13■□□□□ 0.01
SPTBN1-202ENST00000356805 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
SPTBN1-202ENST00000356805 HAP1P54257 671 aaPredicted RBP15.08■□□□□ 0
SPTBN1-202ENST00000356805 ABCC9O60706 1549 aa15.08■□□□□ 0
SPTBN1-202ENST00000356805 CHIC2Q9UKJ5 165 aa15.05■□□□□ -0
SPTBN1-202ENST00000356805 NPHP1O15259 732 aa15.05■□□□□ -0
SPTBN1-202ENST00000356805 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
SPTBN1-202ENST00000356805 CASC1Q6TDU7 716 aa15.04■□□□□ -0
SPTBN1-202ENST00000356805 MIER1Q8N108 512 aa15.03■□□□□ -0
SPTBN1-202ENST00000356805 MRS2Q9HD23 443 aa15.03■□□□□ -0
SPTBN1-202ENST00000356805 NOP58Q9Y2X3 529 aaKnown RBP15.01□□□□□ -0.01
SPTBN1-202ENST00000356805 PLCB2Q00722 1185 aa15.01□□□□□ -0.01
SPTBN1-202ENST00000356805 CLSTN1O94985 981 aa15.01□□□□□ -0.01
SPTBN1-202ENST00000356805 PPP1R15AO75807 674 aaPredicted RBP14.98□□□□□ -0.01
SPTBN1-202ENST00000356805 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
SPTBN1-202ENST00000356805 NAP1L5Q96NT1 182 aaPredicted RBP14.97□□□□□ -0.01
SPTBN1-202ENST00000356805 SENP3-EIF4A1A0A087X0R7 540 aa14.96□□□□□ -0.01
SPTBN1-202ENST00000356805 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
SPTBN1-202ENST00000356805 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
SPTBN1-202ENST00000356805 L1TD1Q5T7N2 865 aaKnown RBP14.95□□□□□ -0.02
SPTBN1-202ENST00000356805 LAS1LQ9Y4W2 734 aaKnown RBP14.95□□□□□ -0.02
SPTBN1-202ENST00000356805 PPP4R2Q9NY27 417 aa14.95□□□□□ -0.02
SPTBN1-202ENST00000356805 FTSJ3Q8IY81 847 aaKnown RBP14.94□□□□□ -0.02
SPTBN1-202ENST00000356805 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
SPTBN1-202ENST00000356805 RTN4Q9NQC3 1192 aaKnown RBP14.91□□□□□ -0.02
SPTBN1-202ENST00000356805 FGD1P98174 961 aa14.9□□□□□ -0.02
SPTBN1-202ENST00000356805 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
SPTBN1-202ENST00000356805 DEKP35659 375 aaKnown RBP14.87□□□□□ -0.03
SPTBN1-202ENST00000356805 OS9Q13438 667 aaPredicted RBP14.86□□□□□ -0.03
SPTBN1-202ENST00000356805 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
SPTBN1-202ENST00000356805 LMOD2Q6P5Q4 547 aa14.86□□□□□ -0.03
SPTBN1-202ENST00000356805 ARID4BQ4LE39 1312 aaPredicted RBP14.85□□□□□ -0.03
SPTBN1-202ENST00000356805 TSPY4P0CV99 314 aa14.85□□□□□ -0.03
SPTBN1-202ENST00000356805 TSPY10P0CW01 314 aa14.85□□□□□ -0.03
SPTBN1-202ENST00000356805 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
SPTBN1-202ENST00000356805 KCNJ4P48050 445 aa14.84□□□□□ -0.03
SPTBN1-202ENST00000356805 HSP90AB1P08238 724 aaKnown RBP14.84□□□□□ -0.03
SPTBN1-202ENST00000356805 EIF4G2P78344 907 aaKnown RBP eCLIP14.84□□□□□ -0.03
SPTBN1-202ENST00000356805 ISY1Q9ULR0 285 aaKnown RBP14.82□□□□□ -0.04
SPTBN1-202ENST00000356805 NRDCO43847 1150 aa14.81□□□□□ -0.04
SPTBN1-202ENST00000356805 NEUROD2Q15784 382 aa14.81□□□□□ -0.04
SPTBN1-202ENST00000356805 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
SPTBN1-202ENST00000356805 PTMSP20962 102 aa14.81□□□□□ -0.04
SPTBN1-202ENST00000356805 PRM3Q9NNZ6 103 aa14.81□□□□□ -0.04
SPTBN1-202ENST00000356805 DRC7Q8IY82 874 aa14.8□□□□□ -0.04
SPTBN1-202ENST00000356805 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
SPTBN1-202ENST00000356805 EEA1Q15075 1411 aa14.78□□□□□ -0.04
SPTBN1-202ENST00000356805 MSNP26038 577 aaKnown RBP14.78□□□□□ -0.04
SPTBN1-202ENST00000356805 GOLGA6L4A6NEF3 574 aa14.76□□□□□ -0.05
SPTBN1-202ENST00000356805 RGS3P49796 1198 aa14.76□□□□□ -0.05
SPTBN1-202ENST00000356805 KNSTRNQ9Y448 316 aa14.76□□□□□ -0.05
SPTBN1-202ENST00000356805 KCNH8Q96L42 1107 aa14.76□□□□□ -0.05
SPTBN1-202ENST00000356805 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
SPTBN1-202ENST00000356805 FRAT1Q92837 279 aaPredicted RBP14.75□□□□□ -0.05
SPTBN1-202ENST00000356805 MAPK8IP3Q9UPT6 1336 aa14.75□□□□□ -0.05
SPTBN1-202ENST00000356805 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
SPTBN1-202ENST00000356805 NOC3LQ8WTT2 800 aaKnown RBP14.74□□□□□ -0.05
SPTBN1-202ENST00000356805 RRP7BPQ9NSQ0 103 aa14.74□□□□□ -0.05
SPTBN1-202ENST00000356805 MTUS2Q5JR59 1369 aa14.74□□□□□ -0.05
SPTBN1-202ENST00000356805 CFAP44Q96MT7 982 aa14.73□□□□□ -0.05
SPTBN1-202ENST00000356805 USP35Q9P2H5 1018 aa14.72□□□□□ -0.05
SPTBN1-202ENST00000356805 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
SPTBN1-202ENST00000356805 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
SPTBN1-202ENST00000356805 CCER2I3L3R5 266 aa14.71□□□□□ -0.05
SPTBN1-202ENST00000356805 GNL2Q13823 731 aaKnown RBP14.71□□□□□ -0.05
SPTBN1-202ENST00000356805 SPRYD3Q8NCJ5 442 aa14.71□□□□□ -0.05
SPTBN1-202ENST00000356805 KIAA2012Q0VF49 1180 aa14.71□□□□□ -0.05
SPTBN1-202ENST00000356805 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
SPTBN1-202ENST00000356805 MS4A1P11836 297 aa14.7□□□□□ -0.06
SPTBN1-202ENST00000356805 TIMELESSQ9UNS1 1208 aa14.7□□□□□ -0.06
SPTBN1-202ENST00000356805 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
SPTBN1-202ENST00000356805 PDE4CQ08493 712 aa14.68□□□□□ -0.06
SPTBN1-202ENST00000356805 ARID3AQ99856 593 aa14.67□□□□□ -0.06
SPTBN1-202ENST00000356805 CLIP1P30622 1438 aa14.66□□□□□ -0.06
SPTBN1-202ENST00000356805 CDCA8Q53HL2 280 aa14.66□□□□□ -0.06
SPTBN1-202ENST00000356805 POGKQ9P215 609 aa14.65□□□□□ -0.06
SPTBN1-202ENST00000356805 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
SPTBN1-202ENST00000356805 HSCBQ8IWL3 235 aa14.65□□□□□ -0.06
SPTBN1-202ENST00000356805 SOX12O15370 315 aa14.64□□□□□ -0.07
SPTBN1-202ENST00000356805 NUDCQ9Y266 331 aa14.63□□□□□ -0.07
SPTBN1-202ENST00000356805 CC2D1BQ5T0F9 858 aaKnown RBP14.63□□□□□ -0.07
SPTBN1-202ENST00000356805 MCCP23508 829 aa14.62□□□□□ -0.07
SPTBN1-202ENST00000356805 ANO8Q9HCE9 1232 aaPredicted RBP14.6□□□□□ -0.07
SPTBN1-202ENST00000356805 A0A0U1RQG5 324 aaPredicted RBP14.6□□□□□ -0.07
SPTBN1-202ENST00000356805 TCERG1O14776 1098 aaKnown RBP14.59□□□□□ -0.07
SPTBN1-202ENST00000356805 GBP4Q96PP9 640 aa14.59□□□□□ -0.07
SPTBN1-202ENST00000356805 GOLGA3Q08378 1498 aa14.59□□□□□ -0.07
SPTBN1-202ENST00000356805 CARD11Q9BXL7 1154 aa14.58□□□□□ -0.07
SPTBN1-202ENST00000356805 HSP90AA2PQ14568 343 aaPredicted RBP14.57□□□□□ -0.08
SPTBN1-202ENST00000356805 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
SPTBN1-202ENST00000356805 APBB1O00213 710 aa14.56□□□□□ -0.08
SPTBN1-202ENST00000356805 CEP162Q5TB80 1403 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms