RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 GOLGA6L22H0YM25 854 aa14.61□□□□□ -0.07
GTF3C1-201ENST00000356183 TULP1O00294 542 aaPredicted RBP14.61□□□□□ -0.07
GTF3C1-201ENST00000356183 MRS2Q9HD23 443 aa14.58□□□□□ -0.07
GTF3C1-201ENST00000356183 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
GTF3C1-201ENST00000356183 ERICH6BQ5W0A0 696 aa14.57□□□□□ -0.08
GTF3C1-201ENST00000356183 HIRIP3Q9BW71 556 aaPredicted RBP14.54□□□□□ -0.08
GTF3C1-201ENST00000356183 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
GTF3C1-201ENST00000356183 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
GTF3C1-201ENST00000356183 SENP3-EIF4A1A0A087X0R7 540 aa14.54□□□□□ -0.08
GTF3C1-201ENST00000356183 ARID4BQ4LE39 1312 aaPredicted RBP14.53□□□□□ -0.08
GTF3C1-201ENST00000356183 CSRNP3Q8WYN3 585 aa14.53□□□□□ -0.08
GTF3C1-201ENST00000356183 STAG3Q9UJ98 1225 aa14.53□□□□□ -0.08
GTF3C1-201ENST00000356183 SUPT16HQ9Y5B9 1047 aaKnown RBP14.5□□□□□ -0.09
GTF3C1-201ENST00000356183 TAOK2Q9UL54 1235 aa14.49□□□□□ -0.09
GTF3C1-201ENST00000356183 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
GTF3C1-201ENST00000356183 NOP58Q9Y2X3 529 aaKnown RBP14.47□□□□□ -0.09
GTF3C1-201ENST00000356183 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
GTF3C1-201ENST00000356183 A0A0G2JS52 829 aa14.45□□□□□ -0.1
GTF3C1-201ENST00000356183 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
GTF3C1-201ENST00000356183 ARID3AQ99856 593 aa14.45□□□□□ -0.1
GTF3C1-201ENST00000356183 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
GTF3C1-201ENST00000356183 DEKP35659 375 aaKnown RBP14.43□□□□□ -0.1
GTF3C1-201ENST00000356183 CASC1Q6TDU7 716 aa14.43□□□□□ -0.1
GTF3C1-201ENST00000356183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.14e-9■■■□□ 15
GTF3C1-201ENST00000356183 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
GTF3C1-201ENST00000356183 ESF1Q9H501 851 aaKnown RBP14.42□□□□□ -0.1
GTF3C1-201ENST00000356183 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-201ENST00000356183 CHIC2Q9UKJ5 165 aa14.4□□□□□ -0.1
GTF3C1-201ENST00000356183 GOLGA6L6A8MZA4 724 aa14.4□□□□□ -0.1
GTF3C1-201ENST00000356183 HSP90AB1P08238 724 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-201ENST00000356183 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
GTF3C1-201ENST00000356183 MSNP26038 577 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-201ENST00000356183 CHAF1AQ13111 956 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-201ENST00000356183 SPRYD3Q8NCJ5 442 aa14.35□□□□□ -0.11
GTF3C1-201ENST00000356183 RGS3P49796 1198 aa14.35□□□□□ -0.11
GTF3C1-201ENST00000356183 FTSJ3Q8IY81 847 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-201ENST00000356183 RBM19Q9Y4C8 960 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-201ENST00000356183 DRC7Q8IY82 874 aa14.32□□□□□ -0.12
GTF3C1-201ENST00000356183 NCBP3Q53F19 620 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-201ENST00000356183 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-201ENST00000356183 L1TD1Q5T7N2 865 aaKnown RBP14.29□□□□□ -0.12
GTF3C1-201ENST00000356183 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
GTF3C1-201ENST00000356183 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
GTF3C1-201ENST00000356183 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
GTF3C1-201ENST00000356183 B4GALNT3Q6L9W6 998 aa14.25□□□□□ -0.13
GTF3C1-201ENST00000356183 TNNT3P45378 269 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-201ENST00000356183 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
GTF3C1-201ENST00000356183 NRDCO43847 1150 aa14.24□□□□□ -0.13
GTF3C1-201ENST00000356183 HSCBQ8IWL3 235 aa14.23□□□□□ -0.13
GTF3C1-201ENST00000356183 FRAT1Q92837 279 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-201ENST00000356183 NEUROD2Q15784 382 aa14.22□□□□□ -0.13
GTF3C1-201ENST00000356183 FGD1P98174 961 aa14.21□□□□□ -0.13
GTF3C1-201ENST00000356183 CLSTN1O94985 981 aa14.21□□□□□ -0.14
GTF3C1-201ENST00000356183 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
GTF3C1-201ENST00000356183 GZF1Q9H116 711 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-201ENST00000356183 KCNJ4P48050 445 aa14.17□□□□□ -0.14
GTF3C1-201ENST00000356183 OS9Q13438 667 aaPredicted RBP14.17□□□□□ -0.14
GTF3C1-201ENST00000356183 CFAP53Q96M91 514 aa14.14□□□□□ -0.15
GTF3C1-201ENST00000356183 NOC3LQ8WTT2 800 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-201ENST00000356183 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
GTF3C1-201ENST00000356183 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
GTF3C1-201ENST00000356183 EEA1Q15075 1411 aa14.12□□□□□ -0.15
GTF3C1-201ENST00000356183 CLIP1P30622 1438 aa14.12□□□□□ -0.15
GTF3C1-201ENST00000356183 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
GTF3C1-201ENST00000356183 KNSTRNQ9Y448 316 aa14.11□□□□□ -0.15
GTF3C1-201ENST00000356183 RSF1Q96T23 1441 aaPredicted RBP14.11□□□□□ -0.15
GTF3C1-201ENST00000356183 RGL3Q3MIN7 710 aa14.09□□□□□ -0.15
GTF3C1-201ENST00000356183 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
GTF3C1-201ENST00000356183 MAPK8IP3Q9UPT6 1336 aa14.09□□□□□ -0.15
GTF3C1-201ENST00000356183 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
GTF3C1-201ENST00000356183 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
GTF3C1-201ENST00000356183 MCCP23508 829 aa14.06□□□□□ -0.16
GTF3C1-201ENST00000356183 PDE4CQ08493 712 aa14.05□□□□□ -0.16
GTF3C1-201ENST00000356183 TSPY4P0CV99 314 aa14.05□□□□□ -0.16
GTF3C1-201ENST00000356183 TSPY10P0CW01 314 aa14.05□□□□□ -0.16
GTF3C1-201ENST00000356183 GNL2Q13823 731 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-201ENST00000356183 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-201ENST00000356183 PPP1R15AO75807 674 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-201ENST00000356183 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
GTF3C1-201ENST00000356183 NPHP1O15259 732 aa14.04□□□□□ -0.16
GTF3C1-201ENST00000356183 SLKQ9H2G2 1235 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-201ENST00000356183 HAP1P54257 671 aaPredicted RBP14.03□□□□□ -0.16
GTF3C1-201ENST00000356183 MTUS2Q5JR59 1369 aa14.02□□□□□ -0.16
GTF3C1-201ENST00000356183 GOLGA2Q08379 1002 aa14.02□□□□□ -0.16
GTF3C1-201ENST00000356183 GBP4Q96PP9 640 aa14.02□□□□□ -0.16
GTF3C1-201ENST00000356183 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
GTF3C1-201ENST00000356183 GOLGA6L3A6NEY3 463 aa14.02□□□□□ -0.17
GTF3C1-201ENST00000356183 HSP90AA2PQ14568 343 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-201ENST00000356183 TNIKQ9UKE5 1360 aa14.01□□□□□ -0.17
GTF3C1-201ENST00000356183 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
GTF3C1-201ENST00000356183 NPM1P06748 294 aaKnown RBP eCLIP14□□□□□ -0.17
GTF3C1-201ENST00000356183 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
GTF3C1-201ENST00000356183 VSIG10Q8N0Z9 540 aa14□□□□□ -0.17
GTF3C1-201ENST00000356183 PTMSP20962 102 aa14□□□□□ -0.17
GTF3C1-201ENST00000356183 APBB1O00213 710 aa13.99□□□□□ -0.17
GTF3C1-201ENST00000356183 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-201ENST00000356183 CHMP4BQ9H444 224 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-201ENST00000356183 PRM3Q9NNZ6 103 aa13.98□□□□□ -0.17
GTF3C1-201ENST00000356183 MS4A1P11836 297 aa13.98□□□□□ -0.17
GTF3C1-201ENST00000356183 SETQ01105 290 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms