RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
C2CD4A-201ENST00000355522 DEKP35659 375 aaKnown RBP22.59■■□□□ 1.21
C2CD4A-201ENST00000355522 CHIC2Q9UKJ5 165 aa22.58■■□□□ 1.2
C2CD4A-201ENST00000355522 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
C2CD4A-201ENST00000355522 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
C2CD4A-201ENST00000355522 KIF27Q86VH2 1401 aa22.49■■□□□ 1.19
C2CD4A-201ENST00000355522 POLR3GLQ9BT43 218 aa22.49■■□□□ 1.19
C2CD4A-201ENST00000355522 CUX2O14529 1486 aa22.49■■□□□ 1.19
C2CD4A-201ENST00000355522 B4GALNT3Q6L9W6 998 aa22.48■■□□□ 1.19
C2CD4A-201ENST00000355522 RTL5Q5HYW3 569 aaPredicted RBP22.45■■□□□ 1.19
C2CD4A-201ENST00000355522 PRKCSHP14314 528 aaPredicted RBP22.44■■□□□ 1.18
C2CD4A-201ENST00000355522 FAM9BQ8IZU0 186 aa22.43■■□□□ 1.18
C2CD4A-201ENST00000355522 RTN4Q9NQC3 1192 aaKnown RBP22.41■■□□□ 1.18
C2CD4A-201ENST00000355522 RRP7BPQ9NSQ0 103 aa22.41■■□□□ 1.18
C2CD4A-201ENST00000355522 FOXD1Q16676 465 aa22.38■■□□□ 1.17
C2CD4A-201ENST00000355522 CCER2I3L3R5 266 aa22.38■■□□□ 1.17
C2CD4A-201ENST00000355522 CUX1P39880 1505 aa22.37■■□□□ 1.17
C2CD4A-201ENST00000355522 FANCIQ9NVI1 1328 aa22.37■■□□□ 1.17
C2CD4A-201ENST00000355522 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
C2CD4A-201ENST00000355522 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
C2CD4A-201ENST00000355522 PHLDB1Q86UU1 1377 aa22.36■■□□□ 1.17
C2CD4A-201ENST00000355522 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
C2CD4A-201ENST00000355522 FHOD3Q2V2M9 1422 aa22.34■■□□□ 1.17
C2CD4A-201ENST00000355522 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
C2CD4A-201ENST00000355522 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
C2CD4A-201ENST00000355522 IGF1RP08069 1367 aa22.32■■□□□ 1.16
C2CD4A-201ENST00000355522 NPM2Q86SE8 214 aaKnown RBP22.31■■□□□ 1.16
C2CD4A-201ENST00000355522 ANO8Q9HCE9 1232 aaPredicted RBP22.31■■□□□ 1.16
C2CD4A-201ENST00000355522 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
C2CD4A-201ENST00000355522 DNAJC5BQ9UF47 199 aa22.3■■□□□ 1.16
C2CD4A-201ENST00000355522 PPP4R2Q9NY27 417 aa22.29■■□□□ 1.16
C2CD4A-201ENST00000355522 MYT1LQ9UL68 1186 aa22.29■■□□□ 1.16
C2CD4A-201ENST00000355522 TOP2BQ02880 1626 aa22.28■■□□□ 1.16
C2CD4A-201ENST00000355522 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
C2CD4A-201ENST00000355522 ANP32AP39687 249 aaKnown RBP22.25■■□□□ 1.15
C2CD4A-201ENST00000355522 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
C2CD4A-201ENST00000355522 WDR97A6NE52 1622 aa22.25■■□□□ 1.15
C2CD4A-201ENST00000355522 SETD5Q9C0A6 1442 aa22.23■■□□□ 1.15
C2CD4A-201ENST00000355522 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
C2CD4A-201ENST00000355522 PAK3O75914 559 aaPredicted RBP22.21■■□□□ 1.15
C2CD4A-201ENST00000355522 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
C2CD4A-201ENST00000355522 TDRD9Q8NDG6 1382 aaKnown RBP22.2■■□□□ 1.14
C2CD4A-201ENST00000355522 ZBTB47Q9UFB7 747 aaPredicted RBP22.19■■□□□ 1.14
C2CD4A-201ENST00000355522 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.17■■□□□ 1.14
C2CD4A-201ENST00000355522 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
C2CD4A-201ENST00000355522 MTUS2Q5JR59 1369 aa22.16■■□□□ 1.14
C2CD4A-201ENST00000355522 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
C2CD4A-201ENST00000355522 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
C2CD4A-201ENST00000355522 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
C2CD4A-201ENST00000355522 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
C2CD4A-201ENST00000355522 CCDC184Q52MB2 194 aa22.08■■□□□ 1.13
C2CD4A-201ENST00000355522 NESP48681 1621 aa22.08■■□□□ 1.12
C2CD4A-201ENST00000355522 ZNF777Q9ULD5 760 aaPredicted RBP22.08■■□□□ 1.12
C2CD4A-201ENST00000355522 EIF5BO60841 1220 aaKnown RBP22.07■■□□□ 1.12
C2CD4A-201ENST00000355522 IL27Q8NEV9 243 aa22.06■■□□□ 1.12
C2CD4A-201ENST00000355522 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
C2CD4A-201ENST00000355522 MAPKBP1O60336 1514 aa22.04■■□□□ 1.12
C2CD4A-201ENST00000355522 FBLN2P98095 1184 aa22.04■■□□□ 1.12
C2CD4A-201ENST00000355522 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
C2CD4A-201ENST00000355522 CFTRP13569 1480 aa22.02■■□□□ 1.12
C2CD4A-201ENST00000355522 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
C2CD4A-201ENST00000355522 HSPA5P11021 654 aaKnown RBP22.02■■□□□ 1.11
C2CD4A-201ENST00000355522 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
C2CD4A-201ENST00000355522 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
C2CD4A-201ENST00000355522 EIF4G2P78344 907 aaKnown RBP eCLIP21.96■■□□□ 1.11
C2CD4A-201ENST00000355522 NEFMP07197 916 aa21.96■■□□□ 1.11
C2CD4A-201ENST00000355522 IPO9Q96P70 1041 aaKnown RBP21.95■■□□□ 1.1
C2CD4A-201ENST00000355522 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
C2CD4A-201ENST00000355522 ERICH6BQ5W0A0 696 aa21.92■■□□□ 1.1
C2CD4A-201ENST00000355522 TIAM1Q13009 1591 aa21.91■■□□□ 1.1
C2CD4A-201ENST00000355522 ZNF644Q9H582 1327 aaPredicted RBP21.9■■□□□ 1.1
C2CD4A-201ENST00000355522 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
C2CD4A-201ENST00000355522 WASHC2AQ641Q2 1341 aa21.89■■□□□ 1.09
C2CD4A-201ENST00000355522 PTPRKQ15262 1439 aa21.89■■□□□ 1.09
C2CD4A-201ENST00000355522 C11orf95C9JLR9 678 aaPredicted RBP21.88■■□□□ 1.09
C2CD4A-201ENST00000355522 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
C2CD4A-201ENST00000355522 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
C2CD4A-201ENST00000355522 DAXXQ9UER7 740 aaPredicted RBP21.86■■□□□ 1.09
C2CD4A-201ENST00000355522 KDM2AQ9Y2K7 1162 aa21.86■■□□□ 1.09
C2CD4A-201ENST00000355522 PCF11O94913 1555 aaKnown RBP21.86■■□□□ 1.09
C2CD4A-201ENST00000355522 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.08
C2CD4A-201ENST00000355522 PRKRIP1Q9H875 184 aaPredicted RBP21.82■■□□□ 1.08
C2CD4A-201ENST00000355522 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
C2CD4A-201ENST00000355522 CCDC18Q5T9S5 1454 aa21.81■■□□□ 1.08
C2CD4A-201ENST00000355522 MPHOSPH9Q99550 1183 aa21.78■■□□□ 1.08
C2CD4A-201ENST00000355522 FGD6Q6ZV73 1430 aa21.78■■□□□ 1.08
C2CD4A-201ENST00000355522 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
C2CD4A-201ENST00000355522 ZBED9Q6R2W3 1325 aa21.77■■□□□ 1.07
C2CD4A-201ENST00000355522 TMC1Q8TDI8 760 aa21.74■■□□□ 1.07
C2CD4A-201ENST00000355522 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
C2CD4A-201ENST00000355522 NBPF8Q3BBV2 869 aa21.73■■□□□ 1.07
C2CD4A-201ENST00000355522 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
C2CD4A-201ENST00000355522 NUDCQ9Y266 331 aa21.68■■□□□ 1.06
C2CD4A-201ENST00000355522 BRPF3Q9ULD4 1205 aa21.67■■□□□ 1.06
C2CD4A-201ENST00000355522 SLC4A3P48751 1232 aa21.66■■□□□ 1.06
C2CD4A-201ENST00000355522 NCOA2Q15596 1464 aa21.65■■□□□ 1.06
C2CD4A-201ENST00000355522 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
C2CD4A-201ENST00000355522 PDS5BQ9NTI5 1447 aa21.64■■□□□ 1.05
C2CD4A-201ENST00000355522 RGL3Q3MIN7 710 aa21.64■■□□□ 1.05
C2CD4A-201ENST00000355522 NAIPQ13075 1403 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms