RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 FAM9AQ8IZU1 332 aaPredicted RBP7.44□□□□□ -1.22
HMBOX1-202ENST00000355231 RAD54L2Q9Y4B4 1467 aa7.42□□□□□ -1.22
HMBOX1-202ENST00000355231 TDRD9Q8NDG6 1382 aaKnown RBP7.42□□□□□ -1.22
HMBOX1-202ENST00000355231 ABCC8Q09428 1581 aa7.41□□□□□ -1.22
HMBOX1-202ENST00000355231 POLA1P09884 1462 aaPredicted RBP7.4□□□□□ -1.22
HMBOX1-202ENST00000355231 SOGA1O94964 1423 aa7.4□□□□□ -1.23
HMBOX1-202ENST00000355231 DNMBPQ6XZF7 1577 aa7.39□□□□□ -1.23
HMBOX1-202ENST00000355231 EIF5BO60841 1220 aaKnown RBP7.39□□□□□ -1.23
HMBOX1-202ENST00000355231 FBLN2P98095 1184 aa7.39□□□□□ -1.23
HMBOX1-202ENST00000355231 TARBP1Q13395 1621 aaKnown RBP7.38□□□□□ -1.23
HMBOX1-202ENST00000355231 ACIN1Q9UKV3 1341 aaKnown RBP7.38□□□□□ -1.23
HMBOX1-202ENST00000355231 CUX1P39880 1505 aa7.37□□□□□ -1.23
HMBOX1-202ENST00000355231 CYB5RLQ6IPT4 315 aa7.37□□□□□ -1.23
HMBOX1-202ENST00000355231 PRDM2Q13029 1718 aa7.36□□□□□ -1.23
HMBOX1-202ENST00000355231 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
HMBOX1-202ENST00000355231 EIF4G3O43432 1585 aaKnown RBP7.35□□□□□ -1.23
HMBOX1-202ENST00000355231 MYCNP04198 464 aaPredicted RBP7.35□□□□□ -1.23
HMBOX1-202ENST00000355231 ANP32EQ9BTT0 268 aa7.35□□□□□ -1.23
HMBOX1-202ENST00000355231 ARHGEF11O15085 1522 aa7.33□□□□□ -1.24
HMBOX1-202ENST00000355231 RIMBP3CA6NJZ7 1639 aa7.33□□□□□ -1.24
HMBOX1-202ENST00000355231 RIMBP3BA6NNM3 1639 aa7.33□□□□□ -1.24
HMBOX1-202ENST00000355231 RIMBP3Q9UFD9 1639 aa7.33□□□□□ -1.24
HMBOX1-202ENST00000355231 CHMP7Q8WUX9 453 aaPredicted RBP7.32□□□□□ -1.24
HMBOX1-202ENST00000355231 SNAPC4Q5SXM2 1469 aa7.31□□□□□ -1.24
HMBOX1-202ENST00000355231 SPINK5Q9NQ38 1064 aaPredicted RBP7.31□□□□□ -1.24
HMBOX1-202ENST00000355231 ATF5Q9Y2D1 282 aaPredicted RBP7.3□□□□□ -1.24
HMBOX1-202ENST00000355231 PPARGC1BQ86YN6 1023 aaKnown RBP7.28□□□□□ -1.24
HMBOX1-202ENST00000355231 GRIN2BQ13224 1484 aa7.28□□□□□ -1.24
HMBOX1-202ENST00000355231 ARAP1Q96P48 1450 aa7.28□□□□□ -1.24
HMBOX1-202ENST00000355231 GAPVD1Q14C86 1478 aa7.28□□□□□ -1.24
HMBOX1-202ENST00000355231 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
HMBOX1-202ENST00000355231 CHD1O14646 1710 aa7.26□□□□□ -1.25
HMBOX1-202ENST00000355231 MAGI1Q96QZ7 1491 aaPredicted RBP7.26□□□□□ -1.25
HMBOX1-202ENST00000355231 SP7Q8TDD2 431 aaPredicted RBP7.25□□□□□ -1.25
HMBOX1-202ENST00000355231 SYNJ2O15056 1496 aa7.25□□□□□ -1.25
HMBOX1-202ENST00000355231 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
HMBOX1-202ENST00000355231 GTF3C3Q9Y5Q9 886 aa7.25□□□□□ -1.25
HMBOX1-202ENST00000355231 CLASP1Q7Z460 1538 aa7.24□□□□□ -1.25
HMBOX1-202ENST00000355231 TRHP20396 242 aaPredicted RBP7.24□□□□□ -1.25
HMBOX1-202ENST00000355231 UBE2Q2Q8WVN8 375 aa7.24□□□□□ -1.25
HMBOX1-202ENST00000355231 MYT1LQ9UL68 1186 aa7.23□□□□□ -1.25
HMBOX1-202ENST00000355231 LOC105371045A0A1W2PR82 267 aa7.22□□□□□ -1.25
HMBOX1-202ENST00000355231 CLSPNQ9HAW4 1339 aa7.22□□□□□ -1.25
HMBOX1-202ENST00000355231 SYNJ1O43426 1573 aa7.22□□□□□ -1.25
HMBOX1-202ENST00000355231 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
HMBOX1-202ENST00000355231 WDR97A6NE52 1622 aa7.21□□□□□ -1.26
HMBOX1-202ENST00000355231 ABCA5Q8WWZ7 1642 aa7.21□□□□□ -1.26
HMBOX1-202ENST00000355231 PCGF6Q9BYE7 350 aa7.2□□□□□ -1.26
HMBOX1-202ENST00000355231 TOP2BQ02880 1626 aa7.2□□□□□ -1.26
HMBOX1-202ENST00000355231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 HNRNPUL2Q1KMD3 747 aaKnown RBP7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 NUP160Q12769 1436 aa7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 GRIN2AQ12879 1464 aa7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 ERCC6L2Q5T890 1561 aa7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 JPH4Q96JJ6 628 aa7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 PLSCR2Q9NRY7 297 aa7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 FHAD1B1AJZ9 1412 aa7.19□□□□□ -1.26
HMBOX1-202ENST00000355231 IGF1RP08069 1367 aa7.18□□□□□ -1.26
HMBOX1-202ENST00000355231 BIVM-ERCC5R4GMW8 1640 aa7.17□□□□□ -1.26
HMBOX1-202ENST00000355231 CAPN15O75808 1086 aa7.16□□□□□ -1.26
HMBOX1-202ENST00000355231 NEUROD1Q13562 356 aa7.16□□□□□ -1.26
HMBOX1-202ENST00000355231 CEP170Q5SW79 1584 aa7.16□□□□□ -1.26
HMBOX1-202ENST00000355231 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
HMBOX1-202ENST00000355231 ATXN8OSP0DMR3 200 aa7.16□□□□□ -1.26
HMBOX1-202ENST00000355231 ERICH6BQ5W0A0 696 aa7.16□□□□□ -1.26
HMBOX1-202ENST00000355231 EEA1Q15075 1411 aa7.15□□□□□ -1.26
HMBOX1-202ENST00000355231 ADAMTS12P58397 1594 aa7.15□□□□□ -1.27
HMBOX1-202ENST00000355231 SOCS7O14512 581 aa7.15□□□□□ -1.27
HMBOX1-202ENST00000355231 ERICH3Q5RHP9 1530 aa7.14□□□□□ -1.27
HMBOX1-202ENST00000355231 DSG3P32926 999 aa7.14□□□□□ -1.27
HMBOX1-202ENST00000355231 RANGAP1P46060 587 aaPredicted RBP7.13□□□□□ -1.27
HMBOX1-202ENST00000355231 PRG4Q92954 1404 aaPredicted RBP7.13□□□□□ -1.27
HMBOX1-202ENST00000355231 LMTK3Q96Q04 1460 aa7.11□□□□□ -1.27
HMBOX1-202ENST00000355231 KIF27Q86VH2 1401 aa7.1□□□□□ -1.27
HMBOX1-202ENST00000355231 ZNF219Q9P2Y4 722 aaPredicted RBP7.09□□□□□ -1.27
HMBOX1-202ENST00000355231 CARMIL1Q5VZK9 1371 aa7.09□□□□□ -1.27
HMBOX1-202ENST00000355231 SHROOM2Q13796 1616 aa7.09□□□□□ -1.27
HMBOX1-202ENST00000355231 ABCB7O75027 752 aa7.09□□□□□ -1.27
HMBOX1-202ENST00000355231 RUSC2Q8N2Y8 1516 aa7.08□□□□□ -1.28
HMBOX1-202ENST00000355231 KIAA0586Q9BVV6 1533 aa7.07□□□□□ -1.28
HMBOX1-202ENST00000355231 TRIM26Q12899 539 aaPredicted RBP7.06□□□□□ -1.28
HMBOX1-202ENST00000355231 KIF21BO75037 1637 aa7.06□□□□□ -1.28
HMBOX1-202ENST00000355231 TNIKQ9UKE5 1360 aa7.06□□□□□ -1.28
HMBOX1-202ENST00000355231 FAM69CQ0P6D2 419 aa7.05□□□□□ -1.28
HMBOX1-202ENST00000355231 ARXQ96QS3 562 aa7.05□□□□□ -1.28
HMBOX1-202ENST00000355231 PODXL2Q9NZ53 605 aa7.05□□□□□ -1.28
HMBOX1-202ENST00000355231 GOLGA3Q08378 1498 aa7.05□□□□□ -1.28
HMBOX1-202ENST00000355231 POLA2Q14181 598 aa7.04□□□□□ -1.28
HMBOX1-202ENST00000355231 PTPRGP23470 1445 aa7.03□□□□□ -1.28
HMBOX1-202ENST00000355231 NPM1P06748 294 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMBOX1-202ENST00000355231 NEFLP07196 543 aa7.03□□□□□ -1.28
HMBOX1-202ENST00000355231 PKNOX2Q96KN3 472 aa7.03□□□□□ -1.28
HMBOX1-202ENST00000355231 CEP162Q5TB80 1403 aa7.02□□□□□ -1.29
HMBOX1-202ENST00000355231 ABCC10Q5T3U5 1492 aa7.01□□□□□ -1.29
HMBOX1-202ENST00000355231 ADCY10Q96PN6 1610 aa7□□□□□ -1.29
HMBOX1-202ENST00000355231 DISP1Q96F81 1524 aa6.99□□□□□ -1.29
HMBOX1-202ENST00000355231 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
HMBOX1-202ENST00000355231 CUL7Q14999 1698 aa6.98□□□□□ -1.29
HMBOX1-202ENST00000355231 PRXQ9BXM0 1461 aa6.97□□□□□ -1.29
HMBOX1-202ENST00000355231 ANO8Q9HCE9 1232 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms