RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
C11orf54-202ENST00000354421 LMTK3Q96Q04 1460 aa12.98□□□□□ -0.33
C11orf54-202ENST00000354421 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
C11orf54-202ENST00000354421 DCBLD2Q96PD2 775 aa12.93□□□□□ -0.34
C11orf54-202ENST00000354421 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
C11orf54-202ENST00000354421 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
C11orf54-202ENST00000354421 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
C11orf54-202ENST00000354421 CYB5RLQ6IPT4 315 aa12.91□□□□□ -0.34
C11orf54-202ENST00000354421 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
C11orf54-202ENST00000354421 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
C11orf54-202ENST00000354421 MYO15BQ96JP2 1530 aa12.84□□□□□ -0.35
C11orf54-202ENST00000354421 CD44P16070 742 aaKnown RBP12.79□□□□□ -0.36
C11orf54-202ENST00000354421 ILDR2Q71H61 639 aa12.79□□□□□ -0.36
C11orf54-202ENST00000354421 NESP48681 1621 aa12.79□□□□□ -0.36
C11orf54-202ENST00000354421 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
C11orf54-202ENST00000354421 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
C11orf54-202ENST00000354421 STAG3Q9UJ98 1225 aa12.71□□□□□ -0.38
C11orf54-202ENST00000354421 SMARCA2P51531 1590 aa12.68□□□□□ -0.38
C11orf54-202ENST00000354421 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
C11orf54-202ENST00000354421 ERCC6L2Q5T890 1561 aa12.64□□□□□ -0.39
C11orf54-202ENST00000354421 KDM4FA0A1W2PPD8 638 aa12.63□□□□□ -0.39
C11orf54-202ENST00000354421 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
C11orf54-202ENST00000354421 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
C11orf54-202ENST00000354421 ZNF579Q8NAF0 562 aaKnown RBP12.59□□□□□ -0.39
C11orf54-202ENST00000354421 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
C11orf54-202ENST00000354421 CREBZFQ9NS37 354 aa12.57□□□□□ -0.4
C11orf54-202ENST00000354421 NCAPD3P42695 1498 aa12.55□□□□□ -0.4
C11orf54-202ENST00000354421 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
C11orf54-202ENST00000354421 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
C11orf54-202ENST00000354421 HRCP23327 699 aa12.52□□□□□ -0.41
C11orf54-202ENST00000354421 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
C11orf54-202ENST00000354421 KIF21AQ7Z4S6 1674 aa12.5□□□□□ -0.41
C11orf54-202ENST00000354421 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
C11orf54-202ENST00000354421 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
C11orf54-202ENST00000354421 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
C11orf54-202ENST00000354421 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
C11orf54-202ENST00000354421 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
C11orf54-202ENST00000354421 LAMC3Q9Y6N6 1575 aa12.46□□□□□ -0.42
C11orf54-202ENST00000354421 LCE2DQ5TA82 110 aaPredicted RBP12.45□□□□□ -0.42
C11orf54-202ENST00000354421 MRC2Q9UBG0 1479 aa12.45□□□□□ -0.42
C11orf54-202ENST00000354421 WDR62O43379 1518 aa12.45□□□□□ -0.42
C11orf54-202ENST00000354421 NPM1P06748 294 aaKnown RBP eCLIP12.43□□□□□ -0.42
C11orf54-202ENST00000354421 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
C11orf54-202ENST00000354421 HECW2Q9P2P5 1572 aa12.42□□□□□ -0.42
C11orf54-202ENST00000354421 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
C11orf54-202ENST00000354421 CDAN1Q8IWY9 1227 aa12.35□□□□□ -0.43
C11orf54-202ENST00000354421 RSF1Q96T23 1441 aaPredicted RBP12.33□□□□□ -0.44
C11orf54-202ENST00000354421 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
C11orf54-202ENST00000354421 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-202ENST00000354421 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
C11orf54-202ENST00000354421 SCUBE2Q9NQ36 999 aa12.29□□□□□ -0.44
C11orf54-202ENST00000354421 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
C11orf54-202ENST00000354421 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
C11orf54-202ENST00000354421 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
C11orf54-202ENST00000354421 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
C11orf54-202ENST00000354421 C7P10643 843 aa12.25□□□□□ -0.45
C11orf54-202ENST00000354421 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
C11orf54-202ENST00000354421 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
C11orf54-202ENST00000354421 POTEJP0CG39 1038 aa12.23□□□□□ -0.45
C11orf54-202ENST00000354421 PCGF6Q9BYE7 350 aa12.2□□□□□ -0.46
C11orf54-202ENST00000354421 PROM2Q8N271 834 aa12.2□□□□□ -0.46
C11orf54-202ENST00000354421 SPATA31D1Q6ZQQ2 1576 aa12.19□□□□□ -0.46
C11orf54-202ENST00000354421 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
C11orf54-202ENST00000354421 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
C11orf54-202ENST00000354421 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
C11orf54-202ENST00000354421 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
C11orf54-202ENST00000354421 PLEKHG5O94827 1062 aa12.11□□□□□ -0.47
C11orf54-202ENST00000354421 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
C11orf54-202ENST00000354421 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
C11orf54-202ENST00000354421 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
C11orf54-202ENST00000354421 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
C11orf54-202ENST00000354421 SPNS2Q8IVW8 549 aa12.06□□□□□ -0.48
C11orf54-202ENST00000354421 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
C11orf54-202ENST00000354421 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
C11orf54-202ENST00000354421 ZNF608Q9ULD9 1512 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-202ENST00000354421 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
C11orf54-202ENST00000354421 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
C11orf54-202ENST00000354421 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
C11orf54-202ENST00000354421 CHD1O14646 1710 aa12□□□□□ -0.49
C11orf54-202ENST00000354421 MIER1Q8N108 512 aa11.99□□□□□ -0.49
C11orf54-202ENST00000354421 KIF13AQ9H1H9 1805 aa11.99□□□□□ -0.49
C11orf54-202ENST00000354421 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
C11orf54-202ENST00000354421 KDM6BO15054 1643 aa11.96□□□□□ -0.49
C11orf54-202ENST00000354421 SMARCA4P51532 1647 aa11.96□□□□□ -0.49
C11orf54-202ENST00000354421 LOC105371045A0A1W2PR82 267 aa11.95□□□□□ -0.5
C11orf54-202ENST00000354421 TIE1P35590 1138 aa11.95□□□□□ -0.5
C11orf54-202ENST00000354421 CERKQ8TCT0 537 aa11.95□□□□□ -0.5
C11orf54-202ENST00000354421 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
C11orf54-202ENST00000354421 ZEB1P37275 1124 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-202ENST00000354421 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
C11orf54-202ENST00000354421 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
C11orf54-202ENST00000354421 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
C11orf54-202ENST00000354421 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
C11orf54-202ENST00000354421 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
C11orf54-202ENST00000354421 MAP3K13O43283 966 aa11.91□□□□□ -0.5
C11orf54-202ENST00000354421 RASEFQ8IZ41 740 aa11.9□□□□□ -0.5
C11orf54-202ENST00000354421 ZBTB47Q9UFB7 747 aaPredicted RBP11.9□□□□□ -0.5
C11orf54-202ENST00000354421 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
C11orf54-202ENST00000354421 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
C11orf54-202ENST00000354421 FAM69CQ0P6D2 419 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms