RNA–Protein interactions for RNA: ENST00000350437.8

DDX11-202, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,724 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-202ENST00000350437 HNRNPUQ00839 825 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDX11-202ENST00000350437 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
DDX11-202ENST00000350437 RUSC2Q8N2Y8 1516 aa13.76□□□□□ -0.21
DDX11-202ENST00000350437 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
DDX11-202ENST00000350437 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
DDX11-202ENST00000350437 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
DDX11-202ENST00000350437 BAZ1BQ9UIG0 1483 aaKnown RBP13.72□□□□□ -0.21
DDX11-202ENST00000350437 CLIP1P30622 1438 aa13.71□□□□□ -0.22
DDX11-202ENST00000350437 ERICH6BQ5W0A0 696 aa13.68□□□□□ -0.22
DDX11-202ENST00000350437 NCAPD3P42695 1498 aa13.68□□□□□ -0.22
DDX11-202ENST00000350437 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
DDX11-202ENST00000350437 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
DDX11-202ENST00000350437 CC2D2AQ9P2K1 1620 aa13.64□□□□□ -0.23
DDX11-202ENST00000350437 DNAJC5BQ9UF47 199 aa13.63□□□□□ -0.23
DDX11-202ENST00000350437 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
DDX11-202ENST00000350437 PPP4R2Q9NY27 417 aa13.63□□□□□ -0.23
DDX11-202ENST00000350437 NPM2Q86SE8 214 aaKnown RBP13.63□□□□□ -0.23
DDX11-202ENST00000350437 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
DDX11-202ENST00000350437 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
DDX11-202ENST00000350437 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
DDX11-202ENST00000350437 PPP1R15AO75807 674 aaPredicted RBP13.61□□□□□ -0.23
DDX11-202ENST00000350437 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
DDX11-202ENST00000350437 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
DDX11-202ENST00000350437 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
DDX11-202ENST00000350437 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
DDX11-202ENST00000350437 SENP3-EIF4A1A0A087X0R7 540 aa13.54□□□□□ -0.24
DDX11-202ENST00000350437 NEFMP07197 916 aa13.54□□□□□ -0.24
DDX11-202ENST00000350437 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
DDX11-202ENST00000350437 EEA1Q15075 1411 aa13.53□□□□□ -0.24
DDX11-202ENST00000350437 IPO9Q96P70 1041 aaKnown RBP13.53□□□□□ -0.24
DDX11-202ENST00000350437 BRPF3Q9ULD4 1205 aa13.52□□□□□ -0.25
DDX11-202ENST00000350437 TIMELESSQ9UNS1 1208 aa13.5□□□□□ -0.25
DDX11-202ENST00000350437 RAB3GAP2Q9H2M9 1393 aa13.49□□□□□ -0.25
DDX11-202ENST00000350437 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
DDX11-202ENST00000350437 PDE4CQ08493 712 aa13.48□□□□□ -0.25
DDX11-202ENST00000350437 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
DDX11-202ENST00000350437 FAM50AQ14320 339 aaKnown RBP13.47□□□□□ -0.25
DDX11-202ENST00000350437 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
DDX11-202ENST00000350437 ARID3CA6NKF2 412 aa13.46□□□□□ -0.26
DDX11-202ENST00000350437 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
DDX11-202ENST00000350437 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
DDX11-202ENST00000350437 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
DDX11-202ENST00000350437 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
DDX11-202ENST00000350437 NCBP3Q53F19 620 aaKnown RBP13.42□□□□□ -0.26
DDX11-202ENST00000350437 RAPGEF2Q9Y4G8 1499 aa13.41□□□□□ -0.26
DDX11-202ENST00000350437 KLHL34Q8N239 644 aa13.41□□□□□ -0.26
DDX11-202ENST00000350437 A0A0U1RQG5 324 aaPredicted RBP13.4□□□□□ -0.26
DDX11-202ENST00000350437 MRS2Q9HD23 443 aa13.39□□□□□ -0.27
DDX11-202ENST00000350437 KIF21BO75037 1637 aa13.38□□□□□ -0.27
DDX11-202ENST00000350437 FBLN2P98095 1184 aa13.37□□□□□ -0.27
DDX11-202ENST00000350437 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
DDX11-202ENST00000350437 CFTRP13569 1480 aa13.36□□□□□ -0.27
DDX11-202ENST00000350437 TONSLQ96HA7 1378 aa13.36□□□□□ -0.27
DDX11-202ENST00000350437 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
DDX11-202ENST00000350437 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.28
DDX11-202ENST00000350437 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
DDX11-202ENST00000350437 SETD5Q9C0A6 1442 aa13.3□□□□□ -0.28
DDX11-202ENST00000350437 AKNAQ7Z591 1439 aa13.29□□□□□ -0.28
DDX11-202ENST00000350437 NESP48681 1621 aa13.29□□□□□ -0.28
DDX11-202ENST00000350437 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
DDX11-202ENST00000350437 POLR3GLQ9BT43 218 aa13.29□□□□□ -0.28
DDX11-202ENST00000350437 GSE1Q14687 1217 aa13.29□□□□□ -0.28
DDX11-202ENST00000350437 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
DDX11-202ENST00000350437 PPM1GO15355 546 aaPredicted RBP13.27□□□□□ -0.29
DDX11-202ENST00000350437 FRAT1Q92837 279 aaPredicted RBP13.27□□□□□ -0.29
DDX11-202ENST00000350437 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
DDX11-202ENST00000350437 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
DDX11-202ENST00000350437 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
DDX11-202ENST00000350437 ARXQ96QS3 562 aa13.25□□□□□ -0.29
DDX11-202ENST00000350437 WASHC2CQ9Y4E1 1318 aa13.24□□□□□ -0.29
DDX11-202ENST00000350437 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
DDX11-202ENST00000350437 HSPA5P11021 654 aaKnown RBP13.24□□□□□ -0.29
DDX11-202ENST00000350437 PDE4AP27815 886 aa13.22□□□□□ -0.29
DDX11-202ENST00000350437 SYNJ1O43426 1573 aa13.22□□□□□ -0.29
DDX11-202ENST00000350437 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
DDX11-202ENST00000350437 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
DDX11-202ENST00000350437 SKAP1Q86WV1 359 aa13.21□□□□□ -0.29
DDX11-202ENST00000350437 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
DDX11-202ENST00000350437 CUX2O14529 1486 aa13.21□□□□□ -0.29
DDX11-202ENST00000350437 NFKBIBQ15653 356 aa13.21□□□□□ -0.29
DDX11-202ENST00000350437 FANCD2Q9BXW9 1451 aa13.2□□□□□ -0.3
DDX11-202ENST00000350437 ZMYND15Q9H091 742 aa13.2□□□□□ -0.3
DDX11-202ENST00000350437 PRKRIP1Q9H875 184 aaPredicted RBP13.2□□□□□ -0.3
DDX11-202ENST00000350437 FGD1P98174 961 aa13.18□□□□□ -0.3
DDX11-202ENST00000350437 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
DDX11-202ENST00000350437 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
DDX11-202ENST00000350437 CUX1P39880 1505 aa13.16□□□□□ -0.3
DDX11-202ENST00000350437 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
DDX11-202ENST00000350437 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX11-202ENST00000350437 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
DDX11-202ENST00000350437 NAP1L5Q96NT1 182 aaPredicted RBP13.14□□□□□ -0.31
DDX11-202ENST00000350437 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
DDX11-202ENST00000350437 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
DDX11-202ENST00000350437 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
DDX11-202ENST00000350437 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
DDX11-202ENST00000350437 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
DDX11-202ENST00000350437 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
DDX11-202ENST00000350437 FRAT2O75474 233 aaPredicted RBP13.12□□□□□ -0.31
DDX11-202ENST00000350437 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
DDX11-202ENST00000350437 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms