RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 PHLDB1Q86UU1 1377 aa33.52■■■□□ 2.96
NKX2-3-201ENST00000344586 FHAD1B1AJZ9 1412 aa33.5■■■□□ 2.95
NKX2-3-201ENST00000344586 SETD5Q9C0A6 1442 aa33.49■■■□□ 2.95
NKX2-3-201ENST00000344586 FANCD2Q9BXW9 1451 aa33.42■■■□□ 2.94
NKX2-3-201ENST00000344586 CC2D2AQ9P2K1 1620 aa33.37■■■□□ 2.93
NKX2-3-201ENST00000344586 DNMBPQ6XZF7 1577 aa33.37■■■□□ 2.93
NKX2-3-201ENST00000344586 ABCA10Q8WWZ4 1543 aa33.34■■■□□ 2.93
NKX2-3-201ENST00000344586 EFCAB5A4FU69 1503 aa33.34■■■□□ 2.93
NKX2-3-201ENST00000344586 FYCO1Q9BQS8 1478 aa33.33■■■□□ 2.93
NKX2-3-201ENST00000344586 FHOD3Q2V2M9 1422 aa33.31■■■□□ 2.92
NKX2-3-201ENST00000344586 FAM50AQ14320 339 aaKnown RBP33.3■■■□□ 2.92
NKX2-3-201ENST00000344586 RAD54L2Q9Y4B4 1467 aa33.3■■■□□ 2.92
NKX2-3-201ENST00000344586 P3H3Q8IVL6 736 aa33.29■■■□□ 2.92
NKX2-3-201ENST00000344586 WDR97A6NE52 1622 aa33.29■■■□□ 2.92
NKX2-3-201ENST00000344586 SUPT16HQ9Y5B9 1047 aaKnown RBP33.27■■■□□ 2.92
NKX2-3-201ENST00000344586 POLA1P09884 1462 aaPredicted RBP33.27■■■□□ 2.92
NKX2-3-201ENST00000344586 AQRO60306 1485 aaKnown RBP eCLIP33.26■■■□□ 2.91
NKX2-3-201ENST00000344586 CUL7Q14999 1698 aa33.26■■■□□ 2.91
NKX2-3-201ENST00000344586 TOPBP1Q92547 1522 aa33.26■■■□□ 2.91
NKX2-3-201ENST00000344586 CASKIN1Q8WXD9 1431 aa33.26■■■□□ 2.91
NKX2-3-201ENST00000344586 CTTNBP2Q8WZ74 1663 aa33.24■■■□□ 2.91
NKX2-3-201ENST00000344586 MYT1Q01538 1121 aa33.21■■■□□ 2.91
NKX2-3-201ENST00000344586 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.2■■■□□ 2.91
NKX2-3-201ENST00000344586 SIN3AQ96ST3 1273 aa33.19■■■□□ 2.9
NKX2-3-201ENST00000344586 ATP1B4Q9UN42 357 aaPredicted RBP33.16■■■□□ 2.9
NKX2-3-201ENST00000344586 KCNH8Q96L42 1107 aa33.13■■■□□ 2.89
NKX2-3-201ENST00000344586 TIMELESSQ9UNS1 1208 aa33.11■■■□□ 2.89
NKX2-3-201ENST00000344586 SNAPC4Q5SXM2 1469 aa33.1■■■□□ 2.89
NKX2-3-201ENST00000344586 NESP48681 1621 aa33.08■■■□□ 2.89
NKX2-3-201ENST00000344586 FMN1Q68DA7 1419 aa33.07■■■□□ 2.88
NKX2-3-201ENST00000344586 FGD6Q6ZV73 1430 aa33.06■■■□□ 2.88
NKX2-3-201ENST00000344586 DDX10Q13206 875 aaKnown RBP33■■■□□ 2.87
NKX2-3-201ENST00000344586 SAMD9Q5K651 1589 aa32.99■■■□□ 2.87
NKX2-3-201ENST00000344586 PPP1R15AO75807 674 aaPredicted RBP32.99■■■□□ 2.87
NKX2-3-201ENST00000344586 LRRIQ1Q96JM4 1722 aa32.96■■■□□ 2.87
NKX2-3-201ENST00000344586 ABCA5Q8WWZ7 1642 aa32.96■■■□□ 2.87
NKX2-3-201ENST00000344586 URB2Q14146 1524 aaKnown RBP32.96■■■□□ 2.87
NKX2-3-201ENST00000344586 CCDC18Q5T9S5 1454 aa32.95■■■□□ 2.86
NKX2-3-201ENST00000344586 HFM1A2PYH4 1435 aa32.92■■■□□ 2.86
NKX2-3-201ENST00000344586 PTPRKQ15262 1439 aa32.91■■■□□ 2.86
NKX2-3-201ENST00000344586 PTPN23Q9H3S7 1636 aa32.91■■■□□ 2.86
NKX2-3-201ENST00000344586 MTUS2Q5JR59 1369 aa32.9■■■□□ 2.86
NKX2-3-201ENST00000344586 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
NKX2-3-201ENST00000344586 GRIN2BQ13224 1484 aa32.88■■■□□ 2.85
NKX2-3-201ENST00000344586 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
NKX2-3-201ENST00000344586 UACAQ9BZF9 1416 aa32.86■■■□□ 2.85
NKX2-3-201ENST00000344586 NCOA2Q15596 1464 aa32.85■■■□□ 2.85
NKX2-3-201ENST00000344586 MYOM3Q5VTT5 1437 aa32.82■■■□□ 2.84
NKX2-3-201ENST00000344586 HIRIP3Q9BW71 556 aaPredicted RBP32.81■■■□□ 2.84
NKX2-3-201ENST00000344586 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
NKX2-3-201ENST00000344586 TDRD9Q8NDG6 1382 aaKnown RBP32.8■■■□□ 2.84
NKX2-3-201ENST00000344586 TONSLQ96HA7 1378 aa32.8■■■□□ 2.84
NKX2-3-201ENST00000344586 SUPT6HQ7KZ85 1726 aaKnown RBP32.8■■■□□ 2.84
NKX2-3-201ENST00000344586 EHBP1L1Q8N3D4 1523 aa32.79■■■□□ 2.84
NKX2-3-201ENST00000344586 NAIPQ13075 1403 aa32.78■■■□□ 2.84
NKX2-3-201ENST00000344586 TSHZ2Q9NRE2 1034 aa32.77■■■□□ 2.84
NKX2-3-201ENST00000344586 CCER2I3L3R5 266 aa32.76■■■□□ 2.84
NKX2-3-201ENST00000344586 KIF21AQ7Z4S6 1674 aa32.75■■■□□ 2.83
NKX2-3-201ENST00000344586 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
NKX2-3-201ENST00000344586 UGGT2Q9NYU1 1516 aa32.72■■■□□ 2.83
NKX2-3-201ENST00000344586 KDM5BQ9UGL1 1544 aa32.7■■■□□ 2.83
NKX2-3-201ENST00000344586 MAGI3Q5TCQ9 1506 aa32.68■■■□□ 2.82
NKX2-3-201ENST00000344586 ANP32CO43423 234 aa32.68■■■□□ 2.82
NKX2-3-201ENST00000344586 FKBP8Q14318 412 aa32.61■■■□□ 2.81
NKX2-3-201ENST00000344586 PDS5BQ9NTI5 1447 aa32.6■■■□□ 2.81
NKX2-3-201ENST00000344586 TCOF1Q13428 1488 aaKnown RBP32.6■■■□□ 2.81
NKX2-3-201ENST00000344586 TARBP1Q13395 1621 aaKnown RBP32.6■■■□□ 2.81
NKX2-3-201ENST00000344586 GCC2Q8IWJ2 1684 aa32.6■■■□□ 2.81
NKX2-3-201ENST00000344586 BCANQ96GW7 911 aa32.57■■■□□ 2.8
NKX2-3-201ENST00000344586 HECW1Q76N89 1606 aa32.56■■■□□ 2.8
NKX2-3-201ENST00000344586 TRIM52Q96A61 297 aa32.53■■■□□ 2.8
NKX2-3-201ENST00000344586 DENND4BO75064 1496 aaPredicted RBP32.52■■■□□ 2.8
NKX2-3-201ENST00000344586 AKNAQ7Z591 1439 aa32.5■■■□□ 2.79
NKX2-3-201ENST00000344586 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
NKX2-3-201ENST00000344586 KDM6BO15054 1643 aa32.46■■■□□ 2.79
NKX2-3-201ENST00000344586 EPRSP07814 1512 aaKnown RBP32.45■■■□□ 2.79
NKX2-3-201ENST00000344586 IQGAP2Q13576 1575 aa32.45■■■□□ 2.79
NKX2-3-201ENST00000344586 RRP7BPQ9NSQ0 103 aa32.44■■■□□ 2.78
NKX2-3-201ENST00000344586 NEFLP07196 543 aa32.43■■■□□ 2.78
NKX2-3-201ENST00000344586 ADAMTS12P58397 1594 aa32.41■■■□□ 2.78
NKX2-3-201ENST00000344586 WDR62O43379 1518 aa32.39■■■□□ 2.78
NKX2-3-201ENST00000344586 CDK13Q14004 1512 aaKnown RBP32.39■■■□□ 2.78
NKX2-3-201ENST00000344586 CHIC2Q9UKJ5 165 aa32.39■■■□□ 2.78
NKX2-3-201ENST00000344586 MIA2Q96PC5 1412 aa32.38■■■□□ 2.77
NKX2-3-201ENST00000344586 DNAJC5BQ9UF47 199 aa32.33■■■□□ 2.77
NKX2-3-201ENST00000344586 WASHC2AQ641Q2 1341 aa32.32■■■□□ 2.77
NKX2-3-201ENST00000344586 HSPA5P11021 654 aaKnown RBP32.32■■■□□ 2.76
NKX2-3-201ENST00000344586 MPHOSPH9Q99550 1183 aa32.25■■■□□ 2.75
NKX2-3-201ENST00000344586 EIF4G2P78344 907 aaKnown RBP eCLIP32.2■■■□□ 2.75
NKX2-3-201ENST00000344586 CNTLNQ9NXG0 1405 aa32.2■■■□□ 2.75
NKX2-3-201ENST00000344586 ANP32EQ9BTT0 268 aa32.2■■■□□ 2.74
NKX2-3-201ENST00000344586 DAPK1P53355 1430 aa32.18■■■□□ 2.74
NKX2-3-201ENST00000344586 HNRNPUQ00839 825 aaKnown RBP eCLIP32.18■■■□□ 2.74
NKX2-3-201ENST00000344586 ROCK1Q13464 1354 aa32.17■■■□□ 2.74
NKX2-3-201ENST00000344586 DNMT1P26358 1616 aaKnown RBP32.17■■■□□ 2.74
NKX2-3-201ENST00000344586 L3MBTL2Q969R5 705 aa32.17■■■□□ 2.74
NKX2-3-201ENST00000344586 ARID3CA6NKF2 412 aa32.15■■■□□ 2.74
NKX2-3-201ENST00000344586 MRC2Q9UBG0 1479 aa32.14■■■□□ 2.74
NKX2-3-201ENST00000344586 NCOA1Q15788 1441 aa32.13■■■□□ 2.73
NKX2-3-201ENST00000344586 RPRD2Q5VT52 1461 aaKnown RBP32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms