RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.6□□□□□ -0.712e-8■■■□□ 18.6
KPNA1-201ENST00000344337 FOXD1Q16676 465 aa10.6□□□□□ -0.71
KPNA1-201ENST00000344337 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
KPNA1-201ENST00000344337 SPRYD3Q8NCJ5 442 aa10.56□□□□□ -0.72
KPNA1-201ENST00000344337 NEFMP07197 916 aa10.56□□□□□ -0.72
KPNA1-201ENST00000344337 KANK4Q5T7N3 995 aaPredicted RBP10.55□□□□□ -0.72
KPNA1-201ENST00000344337 RGL3Q3MIN7 710 aa10.55□□□□□ -0.72
KPNA1-201ENST00000344337 ZBTB7CA1YPR0 619 aa10.55□□□□□ -0.72
KPNA1-201ENST00000344337 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
KPNA1-201ENST00000344337 PLPPR3Q6T4P5 718 aa10.55□□□□□ -0.72
KPNA1-201ENST00000344337 SOGA1O94964 1423 aa10.54□□□□□ -0.72
KPNA1-201ENST00000344337 CLIP1P30622 1438 aa10.53□□□□□ -0.72
KPNA1-201ENST00000344337 RGS3P49796 1198 aa10.53□□□□□ -0.72
KPNA1-201ENST00000344337 ARID3AQ99856 593 aa10.52□□□□□ -0.72
KPNA1-201ENST00000344337 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
KPNA1-201ENST00000344337 CHGAP10645 457 aaKnown RBP10.52□□□□□ -0.73
KPNA1-201ENST00000344337 NEUROD2Q15784 382 aa10.51□□□□□ -0.73
KPNA1-201ENST00000344337 SLC4A3P48751 1232 aa10.49□□□□□ -0.73
KPNA1-201ENST00000344337 HSP90AA1P07900 732 aaKnown RBP10.49□□□□□ -0.73
KPNA1-201ENST00000344337 NOP58Q9Y2X3 529 aaKnown RBP10.49□□□□□ -0.73
KPNA1-201ENST00000344337 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
KPNA1-201ENST00000344337 RB1CC1Q8TDY2 1594 aa10.47□□□□□ -0.73
KPNA1-201ENST00000344337 TNNT2P45379 298 aaPredicted RBP10.47□□□□□ -0.73
KPNA1-201ENST00000344337 CC2D1BQ5T0F9 858 aaKnown RBP10.45□□□□□ -0.74
KPNA1-201ENST00000344337 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
KPNA1-201ENST00000344337 EIF4G2P78344 907 aaKnown RBP eCLIP10.44□□□□□ -0.74
KPNA1-201ENST00000344337 CECR2Q9BXF3 1484 aa10.43□□□□□ -0.74
KPNA1-201ENST00000344337 GZF1Q9H116 711 aaPredicted RBP10.41□□□□□ -0.74
KPNA1-201ENST00000344337 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.75
KPNA1-201ENST00000344337 TIMELESSQ9UNS1 1208 aa10.39□□□□□ -0.75
KPNA1-201ENST00000344337 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
KPNA1-201ENST00000344337 CCDC88BA6NC98 1476 aa10.38□□□□□ -0.75
KPNA1-201ENST00000344337 NAP1L5Q96NT1 182 aaPredicted RBP10.38□□□□□ -0.75
KPNA1-201ENST00000344337 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
KPNA1-201ENST00000344337 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
KPNA1-201ENST00000344337 PLIN1O60240 522 aa10.37□□□□□ -0.75
KPNA1-201ENST00000344337 TAOK2Q9UL54 1235 aa10.36□□□□□ -0.75
KPNA1-201ENST00000344337 NCLP19338 710 aaKnown RBP10.36□□□□□ -0.75
KPNA1-201ENST00000344337 MTUS2Q5JR59 1369 aa10.36□□□□□ -0.75
KPNA1-201ENST00000344337 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
KPNA1-201ENST00000344337 WDR43Q15061 677 aaKnown RBP eCLIP10.35□□□□□ -0.75
KPNA1-201ENST00000344337 HSPA5P11021 654 aaKnown RBP10.35□□□□□ -0.75
KPNA1-201ENST00000344337 C11orf95C9JLR9 678 aaPredicted RBP10.34□□□□□ -0.75
KPNA1-201ENST00000344337 PPM1GO15355 546 aaPredicted RBP10.32□□□□□ -0.76
KPNA1-201ENST00000344337 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
KPNA1-201ENST00000344337 UPF2Q9HAU5 1272 aaKnown RBP10.31□□□□□ -0.76
KPNA1-201ENST00000344337 GOLGA3Q08378 1498 aa10.3□□□□□ -0.76
KPNA1-201ENST00000344337 SKAP1Q86WV1 359 aa10.3□□□□□ -0.76
KPNA1-201ENST00000344337 TNIKQ9UKE5 1360 aa10.29□□□□□ -0.76
KPNA1-201ENST00000344337 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
KPNA1-201ENST00000344337 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
KPNA1-201ENST00000344337 RAB3GAP2Q9H2M9 1393 aa10.28□□□□□ -0.76
KPNA1-201ENST00000344337 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
KPNA1-201ENST00000344337 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
KPNA1-201ENST00000344337 PLCB2Q00722 1185 aa10.26□□□□□ -0.77
KPNA1-201ENST00000344337 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.26□□□□□ -0.77
KPNA1-201ENST00000344337 SAFB2Q14151 953 aaKnown RBP eCLIP10.24□□□□□ -0.77
KPNA1-201ENST00000344337 ANP32BQ92688 251 aaKnown RBP10.24□□□□□ -0.77
KPNA1-201ENST00000344337 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
KPNA1-201ENST00000344337 DCAF11Q8TEB1 546 aa10.24□□□□□ -0.77
KPNA1-201ENST00000344337 MSH5O43196 834 aa10.24□□□□□ -0.77
KPNA1-201ENST00000344337 APBB1O00213 710 aa10.24□□□□□ -0.77
KPNA1-201ENST00000344337 CCDC184Q52MB2 194 aa10.24□□□□□ -0.77
KPNA1-201ENST00000344337 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
KPNA1-201ENST00000344337 TRIM44Q96DX7 344 aaPredicted RBP10.23□□□□□ -0.77
KPNA1-201ENST00000344337 CLUAP1Q96AJ1 413 aa10.22□□□□□ -0.77
KPNA1-201ENST00000344337 WIZO95785 1651 aa10.22□□□□□ -0.77
KPNA1-201ENST00000344337 EXOC6Q8TAG9 804 aa10.21□□□□□ -0.77
KPNA1-201ENST00000344337 MROH2BQ7Z745 1585 aa10.21□□□□□ -0.78
KPNA1-201ENST00000344337 SOX12O15370 315 aa10.2□□□□□ -0.78
KPNA1-201ENST00000344337 BCL2L13Q9BXK5 485 aa10.2□□□□□ -0.78
KPNA1-201ENST00000344337 DHX57Q6P158 1386 aaKnown RBP10.19□□□□□ -0.78
KPNA1-201ENST00000344337 GLIPR1L2Q4G1C9 344 aa10.19□□□□□ -0.78
KPNA1-201ENST00000344337 PPP1R15AO75807 674 aaPredicted RBP10.19□□□□□ -0.78
KPNA1-201ENST00000344337 IPO9Q96P70 1041 aaKnown RBP10.19□□□□□ -0.78
KPNA1-201ENST00000344337 DNTTIP2Q5QJE6 756 aaKnown RBP10.19□□□□□ -0.78
KPNA1-201ENST00000344337 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
KPNA1-201ENST00000344337 L3MBTL2Q969R5 705 aa10.18□□□□□ -0.78
KPNA1-201ENST00000344337 BCL11BQ9C0K0 894 aaPredicted RBP10.18□□□□□ -0.78
KPNA1-201ENST00000344337 FOXD4L5Q5VV16 416 aaPredicted RBP10.17□□□□□ -0.78
KPNA1-201ENST00000344337 FOXD4L4Q8WXT5 416 aaPredicted RBP10.17□□□□□ -0.78
KPNA1-201ENST00000344337 DDRGK1Q96HY6 314 aa10.17□□□□□ -0.78
KPNA1-201ENST00000344337 TSPY4P0CV99 314 aa10.17□□□□□ -0.78
KPNA1-201ENST00000344337 TSPY10P0CW01 314 aa10.17□□□□□ -0.78
KPNA1-201ENST00000344337 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
KPNA1-201ENST00000344337 FOXD4L6Q3SYB3 417 aaPredicted RBP10.16□□□□□ -0.78
KPNA1-201ENST00000344337 FOXD4L3Q6VB84 417 aaPredicted RBP10.16□□□□□ -0.78
KPNA1-201ENST00000344337 RRP7AQ9Y3A4 280 aaKnown RBP10.15□□□□□ -0.78
KPNA1-201ENST00000344337 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
KPNA1-201ENST00000344337 FTSJ3Q8IY81 847 aaKnown RBP10.15□□□□□ -0.79
KPNA1-201ENST00000344337 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
KPNA1-201ENST00000344337 KNSTRNQ9Y448 316 aa10.14□□□□□ -0.79
KPNA1-201ENST00000344337 BECN1Q14457 450 aa10.13□□□□□ -0.79
KPNA1-201ENST00000344337 NUTM2DQ5VT03 806 aaPredicted RBP10.13□□□□□ -0.79
KPNA1-201ENST00000344337 SETD5Q9C0A6 1442 aa10.13□□□□□ -0.79
KPNA1-201ENST00000344337 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
KPNA1-201ENST00000344337 CEP164Q9UPV0 1460 aa10.13□□□□□ -0.79
KPNA1-201ENST00000344337 CCER2I3L3R5 266 aa10.13□□□□□ -0.79
KPNA1-201ENST00000344337 PTMAP06454 111 aaKnown RBP10.13□□□□□ -0.79
KPNA1-201ENST00000344337 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms