RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 FHOD3Q2V2M9 1422 aa14.27□□□□□ -0.12
UBE2D3-203ENST00000343106 LRRC9Q6ZRR7 1453 aa14.27□□□□□ -0.13
UBE2D3-203ENST00000343106 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
UBE2D3-203ENST00000343106 SETD5Q9C0A6 1442 aa14.26□□□□□ -0.13
UBE2D3-203ENST00000343106 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
UBE2D3-203ENST00000343106 TIAM1Q13009 1591 aa14.25□□□□□ -0.13
UBE2D3-203ENST00000343106 NESP48681 1621 aa14.23□□□□□ -0.13
UBE2D3-203ENST00000343106 FHAD1B1AJZ9 1412 aa14.23□□□□□ -0.13
UBE2D3-203ENST00000343106 CC2D2AQ9P2K1 1620 aa14.22□□□□□ -0.13
UBE2D3-203ENST00000343106 DDX10Q13206 875 aaKnown RBP14.22□□□□□ -0.13
UBE2D3-203ENST00000343106 MAPKBP1O60336 1514 aa14.2□□□□□ -0.14
UBE2D3-203ENST00000343106 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
UBE2D3-203ENST00000343106 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
UBE2D3-203ENST00000343106 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
UBE2D3-203ENST00000343106 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
UBE2D3-203ENST00000343106 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
UBE2D3-203ENST00000343106 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
UBE2D3-203ENST00000343106 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
UBE2D3-203ENST00000343106 ABCA10Q8WWZ4 1543 aa14.13□□□□□ -0.15
UBE2D3-203ENST00000343106 MTUS2Q5JR59 1369 aa14.12□□□□□ -0.15
UBE2D3-203ENST00000343106 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
UBE2D3-203ENST00000343106 CASKIN1Q8WXD9 1431 aa14.11□□□□□ -0.15
UBE2D3-203ENST00000343106 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
UBE2D3-203ENST00000343106 PPP1R15AO75807 674 aaPredicted RBP14.1□□□□□ -0.15
UBE2D3-203ENST00000343106 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
UBE2D3-203ENST00000343106 ARID3CA6NKF2 412 aa14.1□□□□□ -0.15
UBE2D3-203ENST00000343106 FYCO1Q9BQS8 1478 aa14.08□□□□□ -0.16
UBE2D3-203ENST00000343106 CHIC2Q9UKJ5 165 aa14.07□□□□□ -0.16
UBE2D3-203ENST00000343106 FMN1Q68DA7 1419 aa14.06□□□□□ -0.16
UBE2D3-203ENST00000343106 BCANQ96GW7 911 aa14.05□□□□□ -0.16
UBE2D3-203ENST00000343106 FGD6Q6ZV73 1430 aa14.05□□□□□ -0.16
UBE2D3-203ENST00000343106 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-203ENST00000343106 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
UBE2D3-203ENST00000343106 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
UBE2D3-203ENST00000343106 TIMELESSQ9UNS1 1208 aa14.04□□□□□ -0.16
UBE2D3-203ENST00000343106 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
UBE2D3-203ENST00000343106 EFCAB5A4FU69 1503 aa14.02□□□□□ -0.16
UBE2D3-203ENST00000343106 TRIM52Q96A61 297 aa14.02□□□□□ -0.17
UBE2D3-203ENST00000343106 CFAP43Q8NDM7 1665 aa14.01□□□□□ -0.17
UBE2D3-203ENST00000343106 AQRO60306 1485 aaKnown RBP eCLIP14.01□□□□□ -0.172e-7■■■■□ 25.1
UBE2D3-203ENST00000343106 GAPVD1Q14C86 1478 aa14.01□□□□□ -0.17
UBE2D3-203ENST00000343106 ANP32CO43423 234 aa14.01□□□□□ -0.17
UBE2D3-203ENST00000343106 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBE2D3-203ENST00000343106 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
UBE2D3-203ENST00000343106 CCDC18Q5T9S5 1454 aa13.98□□□□□ -0.17
UBE2D3-203ENST00000343106 FKBP8Q14318 412 aa13.98□□□□□ -0.17
UBE2D3-203ENST00000343106 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
UBE2D3-203ENST00000343106 PDS5BQ9NTI5 1447 aa13.97□□□□□ -0.17
UBE2D3-203ENST00000343106 CUL7Q14999 1698 aa13.96□□□□□ -0.17
UBE2D3-203ENST00000343106 HFM1A2PYH4 1435 aa13.94□□□□□ -0.18
UBE2D3-203ENST00000343106 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
UBE2D3-203ENST00000343106 NAIPQ13075 1403 aa13.94□□□□□ -0.18
UBE2D3-203ENST00000343106 FOXD1Q16676 465 aa13.94□□□□□ -0.18
UBE2D3-203ENST00000343106 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
UBE2D3-203ENST00000343106 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
UBE2D3-203ENST00000343106 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
UBE2D3-203ENST00000343106 LAMC3Q9Y6N6 1575 aa13.91□□□□□ -0.18
UBE2D3-203ENST00000343106 CTTNBP2Q8WZ74 1663 aa13.9□□□□□ -0.18
UBE2D3-203ENST00000343106 CCER2I3L3R5 266 aa13.9□□□□□ -0.18
UBE2D3-203ENST00000343106 MYT1Q01538 1121 aa13.89□□□□□ -0.19
UBE2D3-203ENST00000343106 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
UBE2D3-203ENST00000343106 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-203ENST00000343106 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
UBE2D3-203ENST00000343106 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
UBE2D3-203ENST00000343106 NEFLP07196 543 aa13.86□□□□□ -0.19
UBE2D3-203ENST00000343106 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
UBE2D3-203ENST00000343106 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
UBE2D3-203ENST00000343106 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.19
UBE2D3-203ENST00000343106 L3MBTL2Q969R5 705 aa13.83□□□□□ -0.2
UBE2D3-203ENST00000343106 CDK13Q14004 1512 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-203ENST00000343106 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
UBE2D3-203ENST00000343106 HNRNPUQ00839 825 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBE2D3-203ENST00000343106 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
UBE2D3-203ENST00000343106 UGGT2Q9NYU1 1516 aa13.82□□□□□ -0.2
UBE2D3-203ENST00000343106 LRRIQ1Q96JM4 1722 aa13.81□□□□□ -0.2
UBE2D3-203ENST00000343106 EIF4G2P78344 907 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE2D3-203ENST00000343106 SUPT6HQ7KZ85 1726 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-203ENST00000343106 EPRSP07814 1512 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-203ENST00000343106 IRX6P78412 446 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-203ENST00000343106 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-203ENST00000343106 C11orf95C9JLR9 678 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-203ENST00000343106 FBLN2P98095 1184 aa13.78□□□□□ -0.2
UBE2D3-203ENST00000343106 KIF21AQ7Z4S6 1674 aa13.78□□□□□ -0.2
UBE2D3-203ENST00000343106 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-203ENST00000343106 ZNF777Q9ULD5 760 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-203ENST00000343106 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-203ENST00000343106 DENND4BO75064 1496 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-203ENST00000343106 CCDC184Q52MB2 194 aa13.76□□□□□ -0.21
UBE2D3-203ENST00000343106 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
UBE2D3-203ENST00000343106 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-203ENST00000343106 KDM6BO15054 1643 aa13.75□□□□□ -0.21
UBE2D3-203ENST00000343106 KDM5BQ9UGL1 1544 aa13.75□□□□□ -0.21
UBE2D3-203ENST00000343106 ZNF608Q9ULD9 1512 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-203ENST00000343106 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
UBE2D3-203ENST00000343106 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
UBE2D3-203ENST00000343106 TCOF1Q13428 1488 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-203ENST00000343106 FAM9BQ8IZU0 186 aa13.73□□□□□ -0.21
UBE2D3-203ENST00000343106 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
UBE2D3-203ENST00000343106 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-203ENST00000343106 POLR3GLQ9BT43 218 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms