RNA–Protein interactions for RNA: ENST00000342216.8

PKN1-202, Transcript of protein kinase N1, humanhuman

TSL 2 BASIC

Gene PKN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-202ENST00000342216 EEA1Q15075 1411 aa20.85■□□□□ 0.93
PKN1-202ENST00000342216 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
PKN1-202ENST00000342216 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
PKN1-202ENST00000342216 SIN3AQ96ST3 1273 aa20.82■□□□□ 0.92
PKN1-202ENST00000342216 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
PKN1-202ENST00000342216 PPP4R2Q9NY27 417 aa20.81■□□□□ 0.92
PKN1-202ENST00000342216 WDR97A6NE52 1622 aa20.79■□□□□ 0.92
PKN1-202ENST00000342216 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
PKN1-202ENST00000342216 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
PKN1-202ENST00000342216 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
PKN1-202ENST00000342216 KIF21BO75037 1637 aa20.69■□□□□ 0.9
PKN1-202ENST00000342216 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
PKN1-202ENST00000342216 ZBTB47Q9UFB7 747 aaPredicted RBP20.69■□□□□ 0.9
PKN1-202ENST00000342216 ANP32AP39687 249 aaKnown RBP20.67■□□□□ 0.9
PKN1-202ENST00000342216 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
PKN1-202ENST00000342216 IPO9Q96P70 1041 aaKnown RBP20.67■□□□□ 0.9
PKN1-202ENST00000342216 RAPGEF2Q9Y4G8 1499 aa20.65■□□□□ 0.9
PKN1-202ENST00000342216 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
PKN1-202ENST00000342216 LAS1LQ9Y4W2 734 aaKnown RBP20.64■□□□□ 0.89
PKN1-202ENST00000342216 BRPF3Q9ULD4 1205 aa20.61■□□□□ 0.89
PKN1-202ENST00000342216 ATAD2BQ9ULI0 1458 aa20.6■□□□□ 0.89
PKN1-202ENST00000342216 NPM2Q86SE8 214 aaKnown RBP20.59■□□□□ 0.89
PKN1-202ENST00000342216 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.88
PKN1-202ENST00000342216 NEFMP07197 916 aa20.57■□□□□ 0.88
PKN1-202ENST00000342216 RRBP1Q9P2E9 1410 aaKnown RBP20.56■□□□□ 0.88
PKN1-202ENST00000342216 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
PKN1-202ENST00000342216 CUX2O14529 1486 aa20.54■□□□□ 0.88
PKN1-202ENST00000342216 CCDC184Q52MB2 194 aa20.53■□□□□ 0.88
PKN1-202ENST00000342216 WASHC2AQ641Q2 1341 aa20.53■□□□□ 0.88
PKN1-202ENST00000342216 TIMELESSQ9UNS1 1208 aa20.52■□□□□ 0.88
PKN1-202ENST00000342216 FAM9BQ8IZU0 186 aa20.51■□□□□ 0.87
PKN1-202ENST00000342216 PKNOX2Q96KN3 472 aa20.5■□□□□ 0.87
PKN1-202ENST00000342216 ARAP1Q96P48 1450 aa20.44■□□□□ 0.86
PKN1-202ENST00000342216 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
PKN1-202ENST00000342216 SETD5Q9C0A6 1442 aa20.4■□□□□ 0.86
PKN1-202ENST00000342216 C11orf95C9JLR9 678 aaPredicted RBP20.4■□□□□ 0.86
PKN1-202ENST00000342216 SYNJ1O43426 1573 aa20.39■□□□□ 0.86
PKN1-202ENST00000342216 WASHC2CQ9Y4E1 1318 aa20.39■□□□□ 0.85
PKN1-202ENST00000342216 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
PKN1-202ENST00000342216 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
PKN1-202ENST00000342216 MRS2Q9HD23 443 aa20.32■□□□□ 0.84
PKN1-202ENST00000342216 TONSLQ96HA7 1378 aa20.32■□□□□ 0.84
PKN1-202ENST00000342216 CNGB1Q14028 1251 aaPredicted RBP20.31■□□□□ 0.84
PKN1-202ENST00000342216 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
PKN1-202ENST00000342216 GSE1Q14687 1217 aa20.28■□□□□ 0.84
PKN1-202ENST00000342216 ZBED9Q6R2W3 1325 aa20.28■□□□□ 0.84
PKN1-202ENST00000342216 FRAT1Q92837 279 aaPredicted RBP20.25■□□□□ 0.83
PKN1-202ENST00000342216 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
PKN1-202ENST00000342216 PPM1GO15355 546 aaPredicted RBP20.22■□□□□ 0.83
PKN1-202ENST00000342216 HSPA5P11021 654 aaKnown RBP20.19■□□□□ 0.82
PKN1-202ENST00000342216 SLC4A3P48751 1232 aa20.19■□□□□ 0.82
PKN1-202ENST00000342216 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
PKN1-202ENST00000342216 VSIG10Q8N0Z9 540 aa20.18■□□□□ 0.82
PKN1-202ENST00000342216 PDE4AP27815 886 aa20.17■□□□□ 0.82
PKN1-202ENST00000342216 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
PKN1-202ENST00000342216 NFKBIBQ15653 356 aa20.16■□□□□ 0.82
PKN1-202ENST00000342216 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
PKN1-202ENST00000342216 HMGXB3Q12766 1538 aa20.15■□□□□ 0.82
PKN1-202ENST00000342216 ZMYND15Q9H091 742 aa20.14■□□□□ 0.81
PKN1-202ENST00000342216 SKAP1Q86WV1 359 aa20.12■□□□□ 0.81
PKN1-202ENST00000342216 PLEKHG5O94827 1062 aa20.11■□□□□ 0.81
PKN1-202ENST00000342216 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
PKN1-202ENST00000342216 NUDCQ9Y266 331 aa20.1■□□□□ 0.81
PKN1-202ENST00000342216 ATP1B4Q9UN42 357 aaPredicted RBP20.08■□□□□ 0.81
PKN1-202ENST00000342216 CNTLNQ9NXG0 1405 aa20.08■□□□□ 0.8
PKN1-202ENST00000342216 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
PKN1-202ENST00000342216 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
PKN1-202ENST00000342216 ARHGAP35Q9NRY4 1499 aa20.06■□□□□ 0.8
PKN1-202ENST00000342216 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
PKN1-202ENST00000342216 FAM43AQ8N2R8 423 aa20.05■□□□□ 0.8
PKN1-202ENST00000342216 EXOC6Q8TAG9 804 aa20.05■□□□□ 0.8
PKN1-202ENST00000342216 CC2D2AQ9P2K1 1620 aa20.04■□□□□ 0.8
PKN1-202ENST00000342216 GLIPR1L2Q4G1C9 344 aa20.04■□□□□ 0.8
PKN1-202ENST00000342216 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
PKN1-202ENST00000342216 PRXQ9BXM0 1461 aa20.03■□□□□ 0.8
PKN1-202ENST00000342216 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.8
PKN1-202ENST00000342216 EIF4G2P78344 907 aaKnown RBP eCLIP20.01■□□□□ 0.79
PKN1-202ENST00000342216 FRAT2O75474 233 aaPredicted RBP19.99■□□□□ 0.79
PKN1-202ENST00000342216 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
PKN1-202ENST00000342216 RRAGDQ9NQL2 400 aaPredicted RBP19.97■□□□□ 0.79
PKN1-202ENST00000342216 PODXL2Q9NZ53 605 aa19.97■□□□□ 0.79
PKN1-202ENST00000342216 TIAM1Q13009 1591 aa19.96■□□□□ 0.79
PKN1-202ENST00000342216 DAXXQ9UER7 740 aaPredicted RBP19.96■□□□□ 0.79
PKN1-202ENST00000342216 CFTRP13569 1480 aa19.96■□□□□ 0.79
PKN1-202ENST00000342216 NCOA2Q15596 1464 aa19.95■□□□□ 0.78
PKN1-202ENST00000342216 LRRC9Q6ZRR7 1453 aa19.95■□□□□ 0.78
PKN1-202ENST00000342216 POLR3GLQ9BT43 218 aa19.94■□□□□ 0.78
PKN1-202ENST00000342216 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
PKN1-202ENST00000342216 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
PKN1-202ENST00000342216 CCDC7Q96M83 1385 aa19.93■□□□□ 0.78
PKN1-202ENST00000342216 ARXQ96QS3 562 aa19.93■□□□□ 0.78
PKN1-202ENST00000342216 KDM5BQ9UGL1 1544 aa19.92■□□□□ 0.78
PKN1-202ENST00000342216 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
PKN1-202ENST00000342216 CUX1P39880 1505 aa19.92■□□□□ 0.78
PKN1-202ENST00000342216 NAP1L5Q96NT1 182 aaPredicted RBP19.91■□□□□ 0.78
PKN1-202ENST00000342216 CCDC18Q5T9S5 1454 aa19.9■□□□□ 0.78
PKN1-202ENST00000342216 RRP1P56182 461 aaKnown RBP19.89■□□□□ 0.77
PKN1-202ENST00000342216 DNAJC5BQ9UF47 199 aa19.89■□□□□ 0.77
PKN1-202ENST00000342216 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.772e-6■■■■■ 29.1
PKN1-202ENST00000342216 MS4A1P11836 297 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms