RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
RANBP3-202ENST00000340578 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
RANBP3-202ENST00000340578 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
RANBP3-202ENST00000340578 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
RANBP3-202ENST00000340578 DNMBPQ6XZF7 1577 aa16.69■□□□□ 0.26
RANBP3-202ENST00000340578 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
RANBP3-202ENST00000340578 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
RANBP3-202ENST00000340578 FHAD1B1AJZ9 1412 aa16.63■□□□□ 0.25
RANBP3-202ENST00000340578 FAM50AQ14320 339 aaKnown RBP16.62■□□□□ 0.25
RANBP3-202ENST00000340578 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
RANBP3-202ENST00000340578 FHOD3Q2V2M9 1422 aa16.62■□□□□ 0.25
RANBP3-202ENST00000340578 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
RANBP3-202ENST00000340578 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
RANBP3-202ENST00000340578 MIER1Q8N108 512 aa16.61■□□□□ 0.25
RANBP3-202ENST00000340578 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
RANBP3-202ENST00000340578 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.25
RANBP3-202ENST00000340578 PHLDB1Q86UU1 1377 aa16.57■□□□□ 0.24
RANBP3-202ENST00000340578 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
RANBP3-202ENST00000340578 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
RANBP3-202ENST00000340578 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
RANBP3-202ENST00000340578 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
RANBP3-202ENST00000340578 PCF11O94913 1555 aaKnown RBP16.54■□□□□ 0.24
RANBP3-202ENST00000340578 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
RANBP3-202ENST00000340578 CUL7Q14999 1698 aa16.51■□□□□ 0.23
RANBP3-202ENST00000340578 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
RANBP3-202ENST00000340578 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
RANBP3-202ENST00000340578 EFCAB5A4FU69 1503 aa16.48■□□□□ 0.23
RANBP3-202ENST00000340578 CASKIN1Q8WXD9 1431 aa16.48■□□□□ 0.23
RANBP3-202ENST00000340578 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
RANBP3-202ENST00000340578 FMN1Q68DA7 1419 aa16.46■□□□□ 0.23
RANBP3-202ENST00000340578 DAXXQ9UER7 740 aaPredicted RBP16.45■□□□□ 0.22
RANBP3-202ENST00000340578 CFAP43Q8NDM7 1665 aa16.43■□□□□ 0.22
RANBP3-202ENST00000340578 MTUS2Q5JR59 1369 aa16.43■□□□□ 0.22
RANBP3-202ENST00000340578 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
RANBP3-202ENST00000340578 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.225e-8■■■■■ 30.4
RANBP3-202ENST00000340578 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
RANBP3-202ENST00000340578 ABCA5Q8WWZ7 1642 aa16.4■□□□□ 0.22
RANBP3-202ENST00000340578 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
RANBP3-202ENST00000340578 KIF21AQ7Z4S6 1674 aa16.39■□□□□ 0.21
RANBP3-202ENST00000340578 EIF5BO60841 1220 aaKnown RBP16.38■□□□□ 0.21
RANBP3-202ENST00000340578 MAPKBP1O60336 1514 aa16.37■□□□□ 0.21
RANBP3-202ENST00000340578 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
RANBP3-202ENST00000340578 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
RANBP3-202ENST00000340578 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
RANBP3-202ENST00000340578 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
RANBP3-202ENST00000340578 SAMD9Q5K651 1589 aa16.31■□□□□ 0.2
RANBP3-202ENST00000340578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.3■□□□□ 0.2
RANBP3-202ENST00000340578 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
RANBP3-202ENST00000340578 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
RANBP3-202ENST00000340578 NCOA2Q15596 1464 aa16.28■□□□□ 0.2
RANBP3-202ENST00000340578 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
RANBP3-202ENST00000340578 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.2
RANBP3-202ENST00000340578 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
RANBP3-202ENST00000340578 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
RANBP3-202ENST00000340578 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
RANBP3-202ENST00000340578 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
RANBP3-202ENST00000340578 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
RANBP3-202ENST00000340578 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
RANBP3-202ENST00000340578 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.18
RANBP3-202ENST00000340578 LRRIQ1Q96JM4 1722 aa16.2■□□□□ 0.18
RANBP3-202ENST00000340578 DDX10Q13206 875 aaKnown RBP16.2■□□□□ 0.18
RANBP3-202ENST00000340578 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
RANBP3-202ENST00000340578 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
RANBP3-202ENST00000340578 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
RANBP3-202ENST00000340578 IQGAP2Q13576 1575 aa16.2■□□□□ 0.18
RANBP3-202ENST00000340578 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
RANBP3-202ENST00000340578 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
RANBP3-202ENST00000340578 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
RANBP3-202ENST00000340578 SUPT6HQ7KZ85 1726 aaKnown RBP16.18■□□□□ 0.18
RANBP3-202ENST00000340578 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
RANBP3-202ENST00000340578 MAGI3Q5TCQ9 1506 aa16.17■□□□□ 0.18
RANBP3-202ENST00000340578 NAIPQ13075 1403 aa16.16■□□□□ 0.18
RANBP3-202ENST00000340578 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
RANBP3-202ENST00000340578 IFT140Q96RY7 1462 aa16.15■□□□□ 0.18
RANBP3-202ENST00000340578 EPRSP07814 1512 aaKnown RBP16.15■□□□□ 0.18
RANBP3-202ENST00000340578 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
RANBP3-202ENST00000340578 CDK13Q14004 1512 aaKnown RBP16.14■□□□□ 0.17
RANBP3-202ENST00000340578 UGGT2Q9NYU1 1516 aa16.14■□□□□ 0.17
RANBP3-202ENST00000340578 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
RANBP3-202ENST00000340578 PTPN23Q9H3S7 1636 aa16.14■□□□□ 0.17
RANBP3-202ENST00000340578 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
RANBP3-202ENST00000340578 WDR62O43379 1518 aa16.13■□□□□ 0.17
RANBP3-202ENST00000340578 FBLN2P98095 1184 aa16.13■□□□□ 0.17
RANBP3-202ENST00000340578 CHMP7Q8WUX9 453 aaPredicted RBP16.09■□□□□ 0.17
RANBP3-202ENST00000340578 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
RANBP3-202ENST00000340578 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
RANBP3-202ENST00000340578 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
RANBP3-202ENST00000340578 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
RANBP3-202ENST00000340578 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
RANBP3-202ENST00000340578 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
RANBP3-202ENST00000340578 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
RANBP3-202ENST00000340578 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
RANBP3-202ENST00000340578 MIA2Q96PC5 1412 aa16.03■□□□□ 0.16
RANBP3-202ENST00000340578 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
RANBP3-202ENST00000340578 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
RANBP3-202ENST00000340578 FOXD1Q16676 465 aa16.02■□□□□ 0.15
RANBP3-202ENST00000340578 EIF4G3O43432 1585 aaKnown RBP16.01■□□□□ 0.15
RANBP3-202ENST00000340578 ANP32CO43423 234 aa16.01■□□□□ 0.15
RANBP3-202ENST00000340578 MPHOSPH9Q99550 1183 aa16.01■□□□□ 0.15
RANBP3-202ENST00000340578 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms