RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 CUX1P39880 1505 aa10.72□□□□□ -0.69
HIPK1-201ENST00000340480 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
HIPK1-201ENST00000340480 ARHGAP35Q9NRY4 1499 aa10.71□□□□□ -0.7
HIPK1-201ENST00000340480 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.7
HIPK1-201ENST00000340480 DNMBPQ6XZF7 1577 aa10.7□□□□□ -0.7
HIPK1-201ENST00000340480 LAMC3Q9Y6N6 1575 aa10.7□□□□□ -0.7
HIPK1-201ENST00000340480 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
HIPK1-201ENST00000340480 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
HIPK1-201ENST00000340480 BIVM-ERCC5R4GMW8 1640 aa10.68□□□□□ -0.7
HIPK1-201ENST00000340480 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
HIPK1-201ENST00000340480 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
HIPK1-201ENST00000340480 DAXXQ9UER7 740 aaPredicted RBP10.67□□□□□ -0.7
HIPK1-201ENST00000340480 TSPY4P0CV99 314 aa10.66□□□□□ -0.7
HIPK1-201ENST00000340480 TSPY10P0CW01 314 aa10.66□□□□□ -0.7
HIPK1-201ENST00000340480 EFCAB5A4FU69 1503 aa10.66□□□□□ -0.7
HIPK1-201ENST00000340480 ABCA10Q8WWZ4 1543 aa10.64□□□□□ -0.71
HIPK1-201ENST00000340480 ZNF777Q9ULD5 760 aaPredicted RBP10.64□□□□□ -0.71
HIPK1-201ENST00000340480 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
HIPK1-201ENST00000340480 ANP32CO43423 234 aa10.64□□□□□ -0.71
HIPK1-201ENST00000340480 SETD5Q9C0A6 1442 aa10.63□□□□□ -0.71
HIPK1-201ENST00000340480 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
HIPK1-201ENST00000340480 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
HIPK1-201ENST00000340480 RAD54L2Q9Y4B4 1467 aa10.62□□□□□ -0.71
HIPK1-201ENST00000340480 FHOD3Q2V2M9 1422 aa10.62□□□□□ -0.71
HIPK1-201ENST00000340480 KANK4Q5T7N3 995 aaPredicted RBP10.62□□□□□ -0.71
HIPK1-201ENST00000340480 SLC4A1APQ9BWU0 796 aaKnown RBP10.61□□□□□ -0.71
HIPK1-201ENST00000340480 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
HIPK1-201ENST00000340480 GRIN2BQ13224 1484 aa10.61□□□□□ -0.71
HIPK1-201ENST00000340480 CFDP1Q9UEE9 299 aaPredicted RBP10.6□□□□□ -0.71
HIPK1-201ENST00000340480 IFT140Q96RY7 1462 aa10.6□□□□□ -0.71
HIPK1-201ENST00000340480 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
HIPK1-201ENST00000340480 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
HIPK1-201ENST00000340480 POLR3GLQ9BT43 218 aa10.58□□□□□ -0.72
HIPK1-201ENST00000340480 FYCO1Q9BQS8 1478 aa10.58□□□□□ -0.72
HIPK1-201ENST00000340480 CUL7Q14999 1698 aa10.57□□□□□ -0.72
HIPK1-201ENST00000340480 NESP48681 1621 aa10.56□□□□□ -0.72
HIPK1-201ENST00000340480 CHIC2Q9UKJ5 165 aa10.56□□□□□ -0.72
HIPK1-201ENST00000340480 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
HIPK1-201ENST00000340480 MAP3K1Q13233 1512 aa10.55□□□□□ -0.72
HIPK1-201ENST00000340480 RRBP1Q9P2E9 1410 aaKnown RBP10.53□□□□□ -0.72
HIPK1-201ENST00000340480 LRRC9Q6ZRR7 1453 aa10.53□□□□□ -0.72
HIPK1-201ENST00000340480 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
HIPK1-201ENST00000340480 RRP7BPQ9NSQ0 103 aa10.52□□□□□ -0.72
HIPK1-201ENST00000340480 AQRO60306 1485 aaKnown RBP eCLIP10.52□□□□□ -0.724e-7■■■■□ 25.8
HIPK1-201ENST00000340480 RSPH4AQ5TD94 716 aa10.5□□□□□ -0.73
HIPK1-201ENST00000340480 ZNF326Q5BKZ1 582 aaKnown RBP10.49□□□□□ -0.73
HIPK1-201ENST00000340480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.49□□□□□ -0.73
HIPK1-201ENST00000340480 EIF4G2P78344 907 aaKnown RBP eCLIP10.49□□□□□ -0.73
HIPK1-201ENST00000340480 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
HIPK1-201ENST00000340480 MYOM3Q5VTT5 1437 aa10.48□□□□□ -0.73
HIPK1-201ENST00000340480 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
HIPK1-201ENST00000340480 TIAM1Q13009 1591 aa10.47□□□□□ -0.73
HIPK1-201ENST00000340480 FGD6Q6ZV73 1430 aa10.47□□□□□ -0.73
HIPK1-201ENST00000340480 ANKRD30AQ9BXX3 1397 aa10.46□□□□□ -0.73
HIPK1-201ENST00000340480 URB2Q14146 1524 aaKnown RBP10.46□□□□□ -0.74
HIPK1-201ENST00000340480 EHBP1L1Q8N3D4 1523 aa10.45□□□□□ -0.74
HIPK1-201ENST00000340480 KIAA0586Q9BVV6 1533 aa10.45□□□□□ -0.74
HIPK1-201ENST00000340480 PRDM2Q13029 1718 aa10.44□□□□□ -0.74
HIPK1-201ENST00000340480 ZBTB47Q9UFB7 747 aaPredicted RBP10.42□□□□□ -0.74
HIPK1-201ENST00000340480 PTPRGP23470 1445 aa10.42□□□□□ -0.74
HIPK1-201ENST00000340480 DDX10Q13206 875 aaKnown RBP10.42□□□□□ -0.74
HIPK1-201ENST00000340480 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
HIPK1-201ENST00000340480 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
HIPK1-201ENST00000340480 PHLDB1Q86UU1 1377 aa10.42□□□□□ -0.74
HIPK1-201ENST00000340480 HECW1Q76N89 1606 aa10.42□□□□□ -0.74
HIPK1-201ENST00000340480 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
HIPK1-201ENST00000340480 NCOA2Q15596 1464 aa10.41□□□□□ -0.74
HIPK1-201ENST00000340480 BCANQ96GW7 911 aa10.41□□□□□ -0.74
HIPK1-201ENST00000340480 IQGAP2Q13576 1575 aa10.4□□□□□ -0.74
HIPK1-201ENST00000340480 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.74
HIPK1-201ENST00000340480 EFCAB2Q5VUJ9 269 aa10.39□□□□□ -0.75
HIPK1-201ENST00000340480 MIER1Q8N108 512 aa10.39□□□□□ -0.75
HIPK1-201ENST00000340480 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
HIPK1-201ENST00000340480 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
HIPK1-201ENST00000340480 SIN3AQ96ST3 1273 aa10.38□□□□□ -0.75
HIPK1-201ENST00000340480 SNAPC4Q5SXM2 1469 aa10.38□□□□□ -0.75
HIPK1-201ENST00000340480 UACAQ9BZF9 1416 aa10.37□□□□□ -0.75
HIPK1-201ENST00000340480 SLC24A1O60721 1099 aa10.37□□□□□ -0.75
HIPK1-201ENST00000340480 PPP1R15AO75807 674 aaPredicted RBP10.37□□□□□ -0.75
HIPK1-201ENST00000340480 NEFMP07197 916 aa10.36□□□□□ -0.75
HIPK1-201ENST00000340480 SYNJ2O15056 1496 aa10.36□□□□□ -0.75
HIPK1-201ENST00000340480 MYT1Q01538 1121 aa10.36□□□□□ -0.75
HIPK1-201ENST00000340480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.36□□□□□ -0.75
HIPK1-201ENST00000340480 MPHOSPH9Q99550 1183 aa10.36□□□□□ -0.75
HIPK1-201ENST00000340480 KANK1Q14678 1352 aa10.35□□□□□ -0.75
HIPK1-201ENST00000340480 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
HIPK1-201ENST00000340480 CDCA8Q53HL2 280 aa10.34□□□□□ -0.75
HIPK1-201ENST00000340480 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
HIPK1-201ENST00000340480 TROQ12816 1431 aaPredicted RBP10.34□□□□□ -0.75
HIPK1-201ENST00000340480 GRIN2AQ12879 1464 aa10.34□□□□□ -0.75
HIPK1-201ENST00000340480 CCER2I3L3R5 266 aa10.33□□□□□ -0.76
HIPK1-201ENST00000340480 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
HIPK1-201ENST00000340480 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
HIPK1-201ENST00000340480 EPRSP07814 1512 aaKnown RBP10.31□□□□□ -0.76
HIPK1-201ENST00000340480 NUP155O75694 1391 aa10.31□□□□□ -0.76
HIPK1-201ENST00000340480 PKD2Q13563 968 aa10.3□□□□□ -0.76
HIPK1-201ENST00000340480 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
HIPK1-201ENST00000340480 PLEKHH2Q8IVE3 1493 aa10.28□□□□□ -0.76
HIPK1-201ENST00000340480 CNGB1Q14028 1251 aaPredicted RBP10.28□□□□□ -0.76
HIPK1-201ENST00000340480 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms