RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
NECAP1-201ENST00000339754 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
NECAP1-201ENST00000339754 CFTRP13569 1480 aa13.25□□□□□ -0.29
NECAP1-201ENST00000339754 MYT1LQ9UL68 1186 aa13.24□□□□□ -0.29
NECAP1-201ENST00000339754 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
NECAP1-201ENST00000339754 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
NECAP1-201ENST00000339754 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
NECAP1-201ENST00000339754 DEKP35659 375 aaKnown RBP13.21□□□□□ -0.29
NECAP1-201ENST00000339754 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
NECAP1-201ENST00000339754 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
NECAP1-201ENST00000339754 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
NECAP1-201ENST00000339754 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
NECAP1-201ENST00000339754 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
NECAP1-201ENST00000339754 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
NECAP1-201ENST00000339754 BIVM-ERCC5R4GMW8 1640 aa13.17□□□□□ -0.3
NECAP1-201ENST00000339754 CUX1P39880 1505 aa13.17□□□□□ -0.3
NECAP1-201ENST00000339754 ANP32CO43423 234 aa13.17□□□□□ -0.3
NECAP1-201ENST00000339754 SIN3AQ96ST3 1273 aa13.14□□□□□ -0.31
NECAP1-201ENST00000339754 PIAS4Q8N2W9 510 aaPredicted RBP13.13□□□□□ -0.31
NECAP1-201ENST00000339754 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
NECAP1-201ENST00000339754 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
NECAP1-201ENST00000339754 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
NECAP1-201ENST00000339754 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
NECAP1-201ENST00000339754 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
NECAP1-201ENST00000339754 ERICH3Q5RHP9 1530 aa13.09□□□□□ -0.31
NECAP1-201ENST00000339754 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
NECAP1-201ENST00000339754 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
NECAP1-201ENST00000339754 PRXQ9BXM0 1461 aa13.08□□□□□ -0.31
NECAP1-201ENST00000339754 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
NECAP1-201ENST00000339754 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
NECAP1-201ENST00000339754 NESP48681 1621 aa13.07□□□□□ -0.32
NECAP1-201ENST00000339754 PPP4R2Q9NY27 417 aa13.06□□□□□ -0.32
NECAP1-201ENST00000339754 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
NECAP1-201ENST00000339754 HNRNPUQ00839 825 aaKnown RBP eCLIP13.04□□□□□ -0.32
NECAP1-201ENST00000339754 ADRA2BP18089 450 aa13.03□□□□□ -0.32
NECAP1-201ENST00000339754 KIF27Q86VH2 1401 aa13.03□□□□□ -0.32
NECAP1-201ENST00000339754 NOP58Q9Y2X3 529 aaKnown RBP13.03□□□□□ -0.32
NECAP1-201ENST00000339754 PAK3O75914 559 aaPredicted RBP13.02□□□□□ -0.33
NECAP1-201ENST00000339754 NBR1Q14596 966 aa13□□□□□ -0.33
NECAP1-201ENST00000339754 FGD5Q6ZNL6 1462 aa12.99□□□□□ -0.33
NECAP1-201ENST00000339754 ARHGAP35Q9NRY4 1499 aa12.99□□□□□ -0.33
NECAP1-201ENST00000339754 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
NECAP1-201ENST00000339754 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
NECAP1-201ENST00000339754 LAMC3Q9Y6N6 1575 aa12.95□□□□□ -0.34
NECAP1-201ENST00000339754 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
NECAP1-201ENST00000339754 TIAM1Q13009 1591 aa12.93□□□□□ -0.34
NECAP1-201ENST00000339754 PHLDB1Q86UU1 1377 aa12.93□□□□□ -0.34
NECAP1-201ENST00000339754 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
NECAP1-201ENST00000339754 TOPBP1Q92547 1522 aa12.92□□□□□ -0.34
NECAP1-201ENST00000339754 IGF1RP08069 1367 aa12.92□□□□□ -0.34
NECAP1-201ENST00000339754 RAD54L2Q9Y4B4 1467 aa12.91□□□□□ -0.34
NECAP1-201ENST00000339754 LRRC9Q6ZRR7 1453 aa12.9□□□□□ -0.35
NECAP1-201ENST00000339754 FAM50AQ14320 339 aaKnown RBP12.89□□□□□ -0.35
NECAP1-201ENST00000339754 IL27Q8NEV9 243 aa12.89□□□□□ -0.35
NECAP1-201ENST00000339754 CCDC184Q52MB2 194 aa12.89□□□□□ -0.35
NECAP1-201ENST00000339754 IPO9Q96P70 1041 aaKnown RBP12.89□□□□□ -0.35
NECAP1-201ENST00000339754 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
NECAP1-201ENST00000339754 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
NECAP1-201ENST00000339754 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
NECAP1-201ENST00000339754 TONSLQ96HA7 1378 aa12.88□□□□□ -0.35
NECAP1-201ENST00000339754 CARMIL1Q5VZK9 1371 aa12.86□□□□□ -0.35
NECAP1-201ENST00000339754 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
NECAP1-201ENST00000339754 FHAD1B1AJZ9 1412 aa12.85□□□□□ -0.35
NECAP1-201ENST00000339754 WASHC2AQ641Q2 1341 aa12.85□□□□□ -0.35
NECAP1-201ENST00000339754 CCDC136Q96JN2 1154 aa12.84□□□□□ -0.35
NECAP1-201ENST00000339754 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
NECAP1-201ENST00000339754 KIF21AQ7Z4S6 1674 aa12.84□□□□□ -0.35
NECAP1-201ENST00000339754 ZBED9Q6R2W3 1325 aa12.84□□□□□ -0.35
NECAP1-201ENST00000339754 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
NECAP1-201ENST00000339754 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
NECAP1-201ENST00000339754 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
NECAP1-201ENST00000339754 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
NECAP1-201ENST00000339754 RTN4Q9NQC3 1192 aaKnown RBP12.8□□□□□ -0.36
NECAP1-201ENST00000339754 NCOA2Q15596 1464 aa12.8□□□□□ -0.36
NECAP1-201ENST00000339754 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
NECAP1-201ENST00000339754 FAM9BQ8IZU0 186 aa12.79□□□□□ -0.36
NECAP1-201ENST00000339754 PRKRIP1Q9H875 184 aaPredicted RBP12.78□□□□□ -0.36
NECAP1-201ENST00000339754 TDRD9Q8NDG6 1382 aaKnown RBP12.78□□□□□ -0.36
NECAP1-201ENST00000339754 UBE2Q2Q8WVN8 375 aa12.77□□□□□ -0.36
NECAP1-201ENST00000339754 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.36
NECAP1-201ENST00000339754 RNF123Q5XPI4 1314 aa12.77□□□□□ -0.37
NECAP1-201ENST00000339754 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
NECAP1-201ENST00000339754 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
NECAP1-201ENST00000339754 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
NECAP1-201ENST00000339754 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
NECAP1-201ENST00000339754 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
NECAP1-201ENST00000339754 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
NECAP1-201ENST00000339754 WASHC2CQ9Y4E1 1318 aa12.75□□□□□ -0.37
NECAP1-201ENST00000339754 AKNAQ7Z591 1439 aa12.74□□□□□ -0.37
NECAP1-201ENST00000339754 SMG6Q86US8 1419 aaKnown RBP12.74□□□□□ -0.37
NECAP1-201ENST00000339754 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
NECAP1-201ENST00000339754 GAPVD1Q14C86 1478 aa12.72□□□□□ -0.37
NECAP1-201ENST00000339754 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
NECAP1-201ENST00000339754 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.37
NECAP1-201ENST00000339754 PTPRKQ15262 1439 aa12.71□□□□□ -0.37
NECAP1-201ENST00000339754 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
NECAP1-201ENST00000339754 AQRO60306 1485 aaKnown RBP eCLIP12.71□□□□□ -0.386e-7■■■■■ 30.6
NECAP1-201ENST00000339754 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
NECAP1-201ENST00000339754 CUL7Q14999 1698 aa12.7□□□□□ -0.38
NECAP1-201ENST00000339754 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms