RNA–Protein interactions for RNA: ENST00000339020.7

SMIM15-201, Transcript of small integral membrane protein 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM15, Length 2,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM15-201ENST00000339020 MYT1Q01538 1121 aa17.52■□□□□ 0.4
SMIM15-201ENST00000339020 PHLDB1Q86UU1 1377 aa17.49■□□□□ 0.39
SMIM15-201ENST00000339020 FHOD3Q2V2M9 1422 aa17.48■□□□□ 0.39
SMIM15-201ENST00000339020 FAM50AQ14320 339 aaKnown RBP17.47■□□□□ 0.39
SMIM15-201ENST00000339020 POLA1P09884 1462 aaPredicted RBP17.47■□□□□ 0.39
SMIM15-201ENST00000339020 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
SMIM15-201ENST00000339020 TIAM1Q13009 1591 aa17.46■□□□□ 0.39
SMIM15-201ENST00000339020 TOPBP1Q92547 1522 aa17.45■□□□□ 0.38
SMIM15-201ENST00000339020 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
SMIM15-201ENST00000339020 TDRD9Q8NDG6 1382 aaKnown RBP17.42■□□□□ 0.38
SMIM15-201ENST00000339020 PCF11O94913 1555 aaKnown RBP17.41■□□□□ 0.38
SMIM15-201ENST00000339020 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
SMIM15-201ENST00000339020 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.37
SMIM15-201ENST00000339020 DNMBPQ6XZF7 1577 aa17.39■□□□□ 0.37
SMIM15-201ENST00000339020 CLSPNQ9HAW4 1339 aa17.39■□□□□ 0.37
SMIM15-201ENST00000339020 ABCA10Q8WWZ4 1543 aa17.37■□□□□ 0.37
SMIM15-201ENST00000339020 URB2Q14146 1524 aaKnown RBP17.37■□□□□ 0.37
SMIM15-201ENST00000339020 MAPKBP1O60336 1514 aa17.36■□□□□ 0.37
SMIM15-201ENST00000339020 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
SMIM15-201ENST00000339020 KCNH8Q96L42 1107 aa17.33■□□□□ 0.36
SMIM15-201ENST00000339020 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
SMIM15-201ENST00000339020 SETD5Q9C0A6 1442 aa17.31■□□□□ 0.36
SMIM15-201ENST00000339020 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
SMIM15-201ENST00000339020 MAP3K1Q13233 1512 aa17.29■□□□□ 0.36
SMIM15-201ENST00000339020 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
SMIM15-201ENST00000339020 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
SMIM15-201ENST00000339020 CASKIN1Q8WXD9 1431 aa17.23■□□□□ 0.35
SMIM15-201ENST00000339020 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
SMIM15-201ENST00000339020 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
SMIM15-201ENST00000339020 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
SMIM15-201ENST00000339020 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
SMIM15-201ENST00000339020 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.34
SMIM15-201ENST00000339020 SNAPC4Q5SXM2 1469 aa17.2■□□□□ 0.34
SMIM15-201ENST00000339020 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
SMIM15-201ENST00000339020 CUL7Q14999 1698 aa17.19■□□□□ 0.34
SMIM15-201ENST00000339020 LRRIQ1Q96JM4 1722 aa17.19■□□□□ 0.34
SMIM15-201ENST00000339020 DDX10Q13206 875 aaKnown RBP17.18■□□□□ 0.34
SMIM15-201ENST00000339020 MTUS2Q5JR59 1369 aa17.17■□□□□ 0.34
SMIM15-201ENST00000339020 EFCAB5A4FU69 1503 aa17.16■□□□□ 0.34
SMIM15-201ENST00000339020 WDR62O43379 1518 aa17.16■□□□□ 0.34
SMIM15-201ENST00000339020 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
SMIM15-201ENST00000339020 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
SMIM15-201ENST00000339020 AQRO60306 1485 aaKnown RBP eCLIP17.15■□□□□ 0.345e-8■■■□□ 18.8
SMIM15-201ENST00000339020 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
SMIM15-201ENST00000339020 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
SMIM15-201ENST00000339020 CHIC2Q9UKJ5 165 aa17.13■□□□□ 0.33
SMIM15-201ENST00000339020 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
SMIM15-201ENST00000339020 MAGI3Q5TCQ9 1506 aa17.1■□□□□ 0.33
SMIM15-201ENST00000339020 RRP7BPQ9NSQ0 103 aa17.09■□□□□ 0.33
SMIM15-201ENST00000339020 NCOA2Q15596 1464 aa17.09■□□□□ 0.33
SMIM15-201ENST00000339020 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
SMIM15-201ENST00000339020 PPP1R15AO75807 674 aaPredicted RBP17.08■□□□□ 0.32
SMIM15-201ENST00000339020 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
SMIM15-201ENST00000339020 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
SMIM15-201ENST00000339020 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
SMIM15-201ENST00000339020 MYOM3Q5VTT5 1437 aa17.02■□□□□ 0.31
SMIM15-201ENST00000339020 NAIPQ13075 1403 aa17.01■□□□□ 0.31
SMIM15-201ENST00000339020 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
SMIM15-201ENST00000339020 ZNF608Q9ULD9 1512 aaPredicted RBP17.01■□□□□ 0.31
SMIM15-201ENST00000339020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17■□□□□ 0.31
SMIM15-201ENST00000339020 CDK13Q14004 1512 aaKnown RBP17■□□□□ 0.31
SMIM15-201ENST00000339020 FOXD1Q16676 465 aa17■□□□□ 0.31
SMIM15-201ENST00000339020 PTPN23Q9H3S7 1636 aa16.99■□□□□ 0.31
SMIM15-201ENST00000339020 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
SMIM15-201ENST00000339020 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
SMIM15-201ENST00000339020 TONSLQ96HA7 1378 aa16.97■□□□□ 0.31
SMIM15-201ENST00000339020 KDM6BO15054 1643 aa16.96■□□□□ 0.3
SMIM15-201ENST00000339020 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
SMIM15-201ENST00000339020 UACAQ9BZF9 1416 aa16.95■□□□□ 0.3
SMIM15-201ENST00000339020 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
SMIM15-201ENST00000339020 UGGT2Q9NYU1 1516 aa16.94■□□□□ 0.3
SMIM15-201ENST00000339020 SUPT6HQ7KZ85 1726 aaKnown RBP16.94■□□□□ 0.3
SMIM15-201ENST00000339020 ZNF644Q9H582 1327 aaPredicted RBP16.94■□□□□ 0.3
SMIM15-201ENST00000339020 DENND4BO75064 1496 aaPredicted RBP16.92■□□□□ 0.3
SMIM15-201ENST00000339020 EPRSP07814 1512 aaKnown RBP16.92■□□□□ 0.3
SMIM15-201ENST00000339020 EHBP1L1Q8N3D4 1523 aa16.92■□□□□ 0.3
SMIM15-201ENST00000339020 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
SMIM15-201ENST00000339020 BCANQ96GW7 911 aa16.91■□□□□ 0.3
SMIM15-201ENST00000339020 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
SMIM15-201ENST00000339020 ADAMTS12P58397 1594 aa16.89■□□□□ 0.3
SMIM15-201ENST00000339020 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
SMIM15-201ENST00000339020 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
SMIM15-201ENST00000339020 TSHZ2Q9NRE2 1034 aa16.87■□□□□ 0.29
SMIM15-201ENST00000339020 FBLN2P98095 1184 aa16.85■□□□□ 0.29
SMIM15-201ENST00000339020 HECW1Q76N89 1606 aa16.83■□□□□ 0.29
SMIM15-201ENST00000339020 MPHOSPH9Q99550 1183 aa16.83■□□□□ 0.28
SMIM15-201ENST00000339020 DISP1Q96F81 1524 aa16.81■□□□□ 0.28
SMIM15-201ENST00000339020 ANP32CO43423 234 aa16.81■□□□□ 0.28
SMIM15-201ENST00000339020 EIF4G3O43432 1585 aaKnown RBP16.81■□□□□ 0.28
SMIM15-201ENST00000339020 HSPA5P11021 654 aaKnown RBP16.8■□□□□ 0.28
SMIM15-201ENST00000339020 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
SMIM15-201ENST00000339020 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
SMIM15-201ENST00000339020 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
SMIM15-201ENST00000339020 FKBP8Q14318 412 aa16.79■□□□□ 0.28
SMIM15-201ENST00000339020 WASHC2AQ641Q2 1341 aa16.78■□□□□ 0.28
SMIM15-201ENST00000339020 NUP153P49790 1475 aaKnown RBP16.78■□□□□ 0.28
SMIM15-201ENST00000339020 PRG4Q92954 1404 aaPredicted RBP16.76■□□□□ 0.27
SMIM15-201ENST00000339020 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
SMIM15-201ENST00000339020 ANP32EQ9BTT0 268 aa16.75■□□□□ 0.27
SMIM15-201ENST00000339020 NBPF8Q3BBV2 869 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms