RNA–Protein interactions for RNA: ENST00000339020.7

SMIM15-201, Transcript of small integral membrane protein 15, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM15, Length 2,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM15-201ENST00000339020 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
SMIM15-201ENST00000339020 SHROOM4Q9ULL8 1493 aa21.46■■□□□ 1.03
SMIM15-201ENST00000339020 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
SMIM15-201ENST00000339020 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
SMIM15-201ENST00000339020 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
SMIM15-201ENST00000339020 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
SMIM15-201ENST00000339020 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
SMIM15-201ENST00000339020 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
SMIM15-201ENST00000339020 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
SMIM15-201ENST00000339020 ABCC9O60706 1549 aa19.9■□□□□ 0.78
SMIM15-201ENST00000339020 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
SMIM15-201ENST00000339020 LOC105371045A0A1W2PR82 267 aa19.85■□□□□ 0.77
SMIM15-201ENST00000339020 NACADO15069 1562 aa19.72■□□□□ 0.75
SMIM15-201ENST00000339020 PCGF6Q9BYE7 350 aa19.69■□□□□ 0.74
SMIM15-201ENST00000339020 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
SMIM15-201ENST00000339020 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
SMIM15-201ENST00000339020 CECR2Q9BXF3 1484 aa19.52■□□□□ 0.71
SMIM15-201ENST00000339020 HRCP23327 699 aa19.5■□□□□ 0.71
SMIM15-201ENST00000339020 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
SMIM15-201ENST00000339020 EHMT2Q96KQ7 1210 aa19.46■□□□□ 0.71
SMIM15-201ENST00000339020 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
SMIM15-201ENST00000339020 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
SMIM15-201ENST00000339020 MROH2BQ7Z745 1585 aa19.38■□□□□ 0.69
SMIM15-201ENST00000339020 WIZO95785 1651 aa19.28■□□□□ 0.68
SMIM15-201ENST00000339020 UNC13AQ9UPW8 1703 aa19.18■□□□□ 0.66
SMIM15-201ENST00000339020 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
SMIM15-201ENST00000339020 PABPN1Q86U42 306 aaKnown RBP eCLIP19.02■□□□□ 0.63
SMIM15-201ENST00000339020 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
SMIM15-201ENST00000339020 BICRAQ9NZM4 1560 aa18.96■□□□□ 0.63
SMIM15-201ENST00000339020 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
SMIM15-201ENST00000339020 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
SMIM15-201ENST00000339020 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
SMIM15-201ENST00000339020 SMARCA4P51532 1647 aa18.86■□□□□ 0.61
SMIM15-201ENST00000339020 TOP2AP11388 1531 aaKnown RBP18.8■□□□□ 0.6
SMIM15-201ENST00000339020 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
SMIM15-201ENST00000339020 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
SMIM15-201ENST00000339020 SOGA1O94964 1423 aa18.72■□□□□ 0.59
SMIM15-201ENST00000339020 RUSC2Q8N2Y8 1516 aa18.69■□□□□ 0.58
SMIM15-201ENST00000339020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
SMIM15-201ENST00000339020 UBTFP17480 764 aaKnown RBP18.52■□□□□ 0.56
SMIM15-201ENST00000339020 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
SMIM15-201ENST00000339020 CEP162Q5TB80 1403 aa18.5■□□□□ 0.55
SMIM15-201ENST00000339020 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
SMIM15-201ENST00000339020 WRNQ14191 1432 aaPredicted RBP eCLIP18.44■□□□□ 0.54
SMIM15-201ENST00000339020 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
SMIM15-201ENST00000339020 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
SMIM15-201ENST00000339020 SYNJ1O43426 1573 aa18.41■□□□□ 0.54
SMIM15-201ENST00000339020 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
SMIM15-201ENST00000339020 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
SMIM15-201ENST00000339020 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
SMIM15-201ENST00000339020 BAZ1BQ9UIG0 1483 aaKnown RBP18.36■□□□□ 0.53
SMIM15-201ENST00000339020 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
SMIM15-201ENST00000339020 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
SMIM15-201ENST00000339020 GOLGA3Q08378 1498 aa18.28■□□□□ 0.52
SMIM15-201ENST00000339020 EEA1Q15075 1411 aa18.26■□□□□ 0.51
SMIM15-201ENST00000339020 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
SMIM15-201ENST00000339020 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
SMIM15-201ENST00000339020 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
SMIM15-201ENST00000339020 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
SMIM15-201ENST00000339020 CEP164Q9UPV0 1460 aa18.16■□□□□ 0.5
SMIM15-201ENST00000339020 CLIP1P30622 1438 aa18.15■□□□□ 0.5
SMIM15-201ENST00000339020 CC2D2AQ9P2K1 1620 aa18.13■□□□□ 0.49
SMIM15-201ENST00000339020 KIF21BO75037 1637 aa18.1■□□□□ 0.49
SMIM15-201ENST00000339020 TOP2BQ02880 1626 aa18.06■□□□□ 0.48
SMIM15-201ENST00000339020 VPS8Q8N3P4 1428 aa18.01■□□□□ 0.47
SMIM15-201ENST00000339020 CUX1P39880 1505 aa18■□□□□ 0.47
SMIM15-201ENST00000339020 DIEXFQ68CQ4 756 aaKnown RBP18■□□□□ 0.47
SMIM15-201ENST00000339020 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
SMIM15-201ENST00000339020 APLP2Q06481 763 aa17.95■□□□□ 0.46
SMIM15-201ENST00000339020 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
SMIM15-201ENST00000339020 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
SMIM15-201ENST00000339020 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
SMIM15-201ENST00000339020 PRXQ9BXM0 1461 aa17.91■□□□□ 0.46
SMIM15-201ENST00000339020 CFTRP13569 1480 aa17.88■□□□□ 0.45
SMIM15-201ENST00000339020 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
SMIM15-201ENST00000339020 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
SMIM15-201ENST00000339020 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
SMIM15-201ENST00000339020 GTF3C3Q9Y5Q9 886 aa17.82■□□□□ 0.44
SMIM15-201ENST00000339020 ERICH3Q5RHP9 1530 aa17.79■□□□□ 0.44
SMIM15-201ENST00000339020 ITGAEP38570 1179 aa17.77■□□□□ 0.43
SMIM15-201ENST00000339020 CUX2O14529 1486 aa17.76■□□□□ 0.43
SMIM15-201ENST00000339020 YTHDC1Q96MU7 727 aaKnown RBP17.75■□□□□ 0.43
SMIM15-201ENST00000339020 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
SMIM15-201ENST00000339020 IGF1RP08069 1367 aa17.74■□□□□ 0.43
SMIM15-201ENST00000339020 PRDM2Q13029 1718 aa17.73■□□□□ 0.43
SMIM15-201ENST00000339020 CENPBP07199 599 aaPredicted RBP17.73■□□□□ 0.43
SMIM15-201ENST00000339020 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
SMIM15-201ENST00000339020 P3H3Q8IVL6 736 aa17.72■□□□□ 0.43
SMIM15-201ENST00000339020 MIER1Q8N108 512 aa17.72■□□□□ 0.43
SMIM15-201ENST00000339020 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
SMIM15-201ENST00000339020 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
SMIM15-201ENST00000339020 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
SMIM15-201ENST00000339020 NESP48681 1621 aa17.64■□□□□ 0.41
SMIM15-201ENST00000339020 CARMIL1Q5VZK9 1371 aa17.63■□□□□ 0.41
SMIM15-201ENST00000339020 RAD54L2Q9Y4B4 1467 aa17.62■□□□□ 0.41
SMIM15-201ENST00000339020 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
SMIM15-201ENST00000339020 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
SMIM15-201ENST00000339020 FANCD2Q9BXW9 1451 aa17.57■□□□□ 0.4
SMIM15-201ENST00000339020 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
SMIM15-201ENST00000339020 CCNB3Q8WWL7 1395 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms