RNA–Protein interactions for RNA: ENST00000338222.6

UBQLN2-201, Transcript of ubiquilin 2, humanhuman

APPRIS P1 BASIC

Gene UBQLN2, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2-201ENST00000338222 RTL5Q5HYW3 569 aaPredicted RBP13.64□□□□□ -0.23
UBQLN2-201ENST00000338222 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
UBQLN2-201ENST00000338222 SMARCA4P51532 1647 aa13.6□□□□□ -0.23
UBQLN2-201ENST00000338222 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
UBQLN2-201ENST00000338222 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
UBQLN2-201ENST00000338222 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
UBQLN2-201ENST00000338222 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
UBQLN2-201ENST00000338222 SETD5Q9C0A6 1442 aa13.55□□□□□ -0.24
UBQLN2-201ENST00000338222 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
UBQLN2-201ENST00000338222 MRS2Q9HD23 443 aa13.54□□□□□ -0.24
UBQLN2-201ENST00000338222 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
UBQLN2-201ENST00000338222 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
UBQLN2-201ENST00000338222 WDR97A6NE52 1622 aa13.52□□□□□ -0.24
UBQLN2-201ENST00000338222 ANP32AP39687 249 aaKnown RBP13.52□□□□□ -0.24
UBQLN2-201ENST00000338222 NOP58Q9Y2X3 529 aaKnown RBP13.52□□□□□ -0.25
UBQLN2-201ENST00000338222 ARAP1Q96P48 1450 aa13.5□□□□□ -0.25
UBQLN2-201ENST00000338222 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
UBQLN2-201ENST00000338222 CHIC2Q9UKJ5 165 aa13.49□□□□□ -0.25
UBQLN2-201ENST00000338222 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
UBQLN2-201ENST00000338222 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
UBQLN2-201ENST00000338222 RRBP1Q9P2E9 1410 aaKnown RBP13.47□□□□□ -0.25
UBQLN2-201ENST00000338222 ZNF326Q5BKZ1 582 aaKnown RBP13.46□□□□□ -0.26
UBQLN2-201ENST00000338222 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
UBQLN2-201ENST00000338222 SALL2Q9Y467 1007 aaPredicted RBP13.44□□□□□ -0.26
UBQLN2-201ENST00000338222 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
UBQLN2-201ENST00000338222 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
UBQLN2-201ENST00000338222 CCDC184Q52MB2 194 aa13.43□□□□□ -0.26
UBQLN2-201ENST00000338222 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
UBQLN2-201ENST00000338222 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
UBQLN2-201ENST00000338222 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
UBQLN2-201ENST00000338222 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
UBQLN2-201ENST00000338222 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
UBQLN2-201ENST00000338222 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
UBQLN2-201ENST00000338222 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
UBQLN2-201ENST00000338222 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
UBQLN2-201ENST00000338222 MAPKBP1O60336 1514 aa13.38□□□□□ -0.27
UBQLN2-201ENST00000338222 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.38□□□□□ -0.27
UBQLN2-201ENST00000338222 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
UBQLN2-201ENST00000338222 FOXD1Q16676 465 aa13.36□□□□□ -0.27
UBQLN2-201ENST00000338222 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
UBQLN2-201ENST00000338222 DAXXQ9UER7 740 aaPredicted RBP13.33□□□□□ -0.28
UBQLN2-201ENST00000338222 MTUS2Q5JR59 1369 aa13.33□□□□□ -0.28
UBQLN2-201ENST00000338222 WASHC2AQ641Q2 1341 aa13.32□□□□□ -0.28
UBQLN2-201ENST00000338222 NEFMP07197 916 aa13.32□□□□□ -0.28
UBQLN2-201ENST00000338222 IL27Q8NEV9 243 aa13.32□□□□□ -0.28
UBQLN2-201ENST00000338222 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
UBQLN2-201ENST00000338222 IPO9Q96P70 1041 aaKnown RBP13.31□□□□□ -0.28
UBQLN2-201ENST00000338222 ERICH6BQ5W0A0 696 aa13.3□□□□□ -0.28
UBQLN2-201ENST00000338222 PRKRIP1Q9H875 184 aaPredicted RBP13.29□□□□□ -0.28
UBQLN2-201ENST00000338222 CUX2O14529 1486 aa13.29□□□□□ -0.28
UBQLN2-201ENST00000338222 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
UBQLN2-201ENST00000338222 TMC1Q8TDI8 760 aa13.28□□□□□ -0.28
UBQLN2-201ENST00000338222 CARMIL1Q5VZK9 1371 aa13.28□□□□□ -0.28
UBQLN2-201ENST00000338222 LRRC9Q6ZRR7 1453 aa13.26□□□□□ -0.29
UBQLN2-201ENST00000338222 L3MBTL2Q969R5 705 aa13.25□□□□□ -0.29
UBQLN2-201ENST00000338222 FHOD3Q2V2M9 1422 aa13.25□□□□□ -0.29
UBQLN2-201ENST00000338222 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
UBQLN2-201ENST00000338222 AKNAQ7Z591 1439 aa13.23□□□□□ -0.29
UBQLN2-201ENST00000338222 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
UBQLN2-201ENST00000338222 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
UBQLN2-201ENST00000338222 C11orf95C9JLR9 678 aaPredicted RBP13.22□□□□□ -0.29
UBQLN2-201ENST00000338222 CCDC18Q5T9S5 1454 aa13.22□□□□□ -0.29
UBQLN2-201ENST00000338222 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
UBQLN2-201ENST00000338222 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
UBQLN2-201ENST00000338222 TIAM1Q13009 1591 aa13.19□□□□□ -0.3
UBQLN2-201ENST00000338222 IGF1RP08069 1367 aa13.18□□□□□ -0.3
UBQLN2-201ENST00000338222 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
UBQLN2-201ENST00000338222 SLC4A3P48751 1232 aa13.16□□□□□ -0.3
UBQLN2-201ENST00000338222 MPHOSPH9Q99550 1183 aa13.16□□□□□ -0.3
UBQLN2-201ENST00000338222 KDM2AQ9Y2K7 1162 aa13.15□□□□□ -0.3
UBQLN2-201ENST00000338222 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.31
UBQLN2-201ENST00000338222 ARXQ96QS3 562 aa13.15□□□□□ -0.31
UBQLN2-201ENST00000338222 CNTLNQ9NXG0 1405 aa13.14□□□□□ -0.31
UBQLN2-201ENST00000338222 CUX1P39880 1505 aa13.13□□□□□ -0.31
UBQLN2-201ENST00000338222 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
UBQLN2-201ENST00000338222 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
UBQLN2-201ENST00000338222 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
UBQLN2-201ENST00000338222 PDE4AP27815 886 aa13.12□□□□□ -0.31
UBQLN2-201ENST00000338222 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
UBQLN2-201ENST00000338222 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
UBQLN2-201ENST00000338222 ZNF777Q9ULD5 760 aaPredicted RBP13.11□□□□□ -0.31
UBQLN2-201ENST00000338222 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
UBQLN2-201ENST00000338222 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
UBQLN2-201ENST00000338222 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
UBQLN2-201ENST00000338222 PPM1GO15355 546 aaPredicted RBP13.1□□□□□ -0.31
UBQLN2-201ENST00000338222 NBPF8Q3BBV2 869 aa13.1□□□□□ -0.31
UBQLN2-201ENST00000338222 PLIN1O60240 522 aa13.09□□□□□ -0.31
UBQLN2-201ENST00000338222 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
UBQLN2-201ENST00000338222 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
UBQLN2-201ENST00000338222 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.32
UBQLN2-201ENST00000338222 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
UBQLN2-201ENST00000338222 RGS3P49796 1198 aa13.04□□□□□ -0.32
UBQLN2-201ENST00000338222 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
UBQLN2-201ENST00000338222 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
UBQLN2-201ENST00000338222 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
UBQLN2-201ENST00000338222 NAIPQ13075 1403 aa13.03□□□□□ -0.32
UBQLN2-201ENST00000338222 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
UBQLN2-201ENST00000338222 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.32
UBQLN2-201ENST00000338222 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
UBQLN2-201ENST00000338222 GSE1Q14687 1217 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms