RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
RARB-201ENST00000330688 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.05
RARB-201ENST00000330688 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
RARB-201ENST00000330688 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
RARB-201ENST00000330688 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
RARB-201ENST00000330688 YTHDC1Q96MU7 727 aaKnown RBP14.73□□□□□ -0.05
RARB-201ENST00000330688 FHOD3Q2V2M9 1422 aa14.71□□□□□ -0.05
RARB-201ENST00000330688 RAB3GAP2Q9H2M9 1393 aa14.71□□□□□ -0.06
RARB-201ENST00000330688 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
RARB-201ENST00000330688 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
RARB-201ENST00000330688 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
RARB-201ENST00000330688 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
RARB-201ENST00000330688 LAMC3Q9Y6N6 1575 aa14.66□□□□□ -0.06
RARB-201ENST00000330688 FAM50AQ14320 339 aaKnown RBP14.66□□□□□ -0.06
RARB-201ENST00000330688 CUL7Q14999 1698 aa14.65□□□□□ -0.06
RARB-201ENST00000330688 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
RARB-201ENST00000330688 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
RARB-201ENST00000330688 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
RARB-201ENST00000330688 EFCAB5A4FU69 1503 aa14.65□□□□□ -0.06
RARB-201ENST00000330688 CASKIN1Q8WXD9 1431 aa14.64□□□□□ -0.07
RARB-201ENST00000330688 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
RARB-201ENST00000330688 MAPKBP1O60336 1514 aa14.63□□□□□ -0.07
RARB-201ENST00000330688 AQRO60306 1485 aaKnown RBP eCLIP14.62□□□□□ -0.07
RARB-201ENST00000330688 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
RARB-201ENST00000330688 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
RARB-201ENST00000330688 CTTNBP2Q8WZ74 1663 aa14.59□□□□□ -0.07
RARB-201ENST00000330688 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
RARB-201ENST00000330688 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.07
RARB-201ENST00000330688 FMN1Q68DA7 1419 aa14.58□□□□□ -0.08
RARB-201ENST00000330688 ABCA5Q8WWZ7 1642 aa14.58□□□□□ -0.08
RARB-201ENST00000330688 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
RARB-201ENST00000330688 SIN3AQ96ST3 1273 aa14.55□□□□□ -0.08
RARB-201ENST00000330688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.55□□□□□ -0.08
RARB-201ENST00000330688 SAMD9Q5K651 1589 aa14.52□□□□□ -0.08
RARB-201ENST00000330688 FGD6Q6ZV73 1430 aa14.51□□□□□ -0.09
RARB-201ENST00000330688 MTUS2Q5JR59 1369 aa14.51□□□□□ -0.09
RARB-201ENST00000330688 KIF21AQ7Z4S6 1674 aa14.5□□□□□ -0.09
RARB-201ENST00000330688 GRIN2BQ13224 1484 aa14.48□□□□□ -0.09
RARB-201ENST00000330688 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
RARB-201ENST00000330688 PTPRKQ15262 1439 aa14.47□□□□□ -0.09
RARB-201ENST00000330688 LRRIQ1Q96JM4 1722 aa14.45□□□□□ -0.1
RARB-201ENST00000330688 NCOA2Q15596 1464 aa14.45□□□□□ -0.1
RARB-201ENST00000330688 TIMELESSQ9UNS1 1208 aa14.45□□□□□ -0.1
RARB-201ENST00000330688 MYOM3Q5VTT5 1437 aa14.43□□□□□ -0.1
RARB-201ENST00000330688 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
RARB-201ENST00000330688 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
RARB-201ENST00000330688 THOC2Q8NI27 1593 aaKnown RBP14.41□□□□□ -0.1
RARB-201ENST00000330688 CCDC18Q5T9S5 1454 aa14.4□□□□□ -0.1
RARB-201ENST00000330688 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
RARB-201ENST00000330688 EHBP1L1Q8N3D4 1523 aa14.39□□□□□ -0.11
RARB-201ENST00000330688 NAIPQ13075 1403 aa14.38□□□□□ -0.11
RARB-201ENST00000330688 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
RARB-201ENST00000330688 KCNH8Q96L42 1107 aa14.38□□□□□ -0.11
RARB-201ENST00000330688 SUPT6HQ7KZ85 1726 aaKnown RBP14.37□□□□□ -0.11
RARB-201ENST00000330688 UACAQ9BZF9 1416 aa14.37□□□□□ -0.11
RARB-201ENST00000330688 PTPN23Q9H3S7 1636 aa14.37□□□□□ -0.11
RARB-201ENST00000330688 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
RARB-201ENST00000330688 UGGT2Q9NYU1 1516 aa14.37□□□□□ -0.11
RARB-201ENST00000330688 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
RARB-201ENST00000330688 MRC2Q9UBG0 1479 aa14.36□□□□□ -0.11
RARB-201ENST00000330688 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
RARB-201ENST00000330688 ADAMTS12P58397 1594 aa14.35□□□□□ -0.11
RARB-201ENST00000330688 IQGAP2Q13576 1575 aa14.35□□□□□ -0.11
RARB-201ENST00000330688 TONSLQ96HA7 1378 aa14.33□□□□□ -0.12
RARB-201ENST00000330688 EPRSP07814 1512 aaKnown RBP14.32□□□□□ -0.12
RARB-201ENST00000330688 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
RARB-201ENST00000330688 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
RARB-201ENST00000330688 CHIC2Q9UKJ5 165 aa14.31□□□□□ -0.12
RARB-201ENST00000330688 HECW1Q76N89 1606 aa14.31□□□□□ -0.12
RARB-201ENST00000330688 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
RARB-201ENST00000330688 TCOF1Q13428 1488 aaKnown RBP14.3□□□□□ -0.12
RARB-201ENST00000330688 CDK13Q14004 1512 aaKnown RBP14.3□□□□□ -0.12
RARB-201ENST00000330688 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
RARB-201ENST00000330688 WDR62O43379 1518 aa14.28□□□□□ -0.12
RARB-201ENST00000330688 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
RARB-201ENST00000330688 MIA2Q96PC5 1412 aa14.25□□□□□ -0.13
RARB-201ENST00000330688 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
RARB-201ENST00000330688 DENND4BO75064 1496 aaPredicted RBP14.24□□□□□ -0.13
RARB-201ENST00000330688 KDM5BQ9UGL1 1544 aa14.24□□□□□ -0.13
RARB-201ENST00000330688 DISP1Q96F81 1524 aa14.23□□□□□ -0.13
RARB-201ENST00000330688 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
RARB-201ENST00000330688 AKNAQ7Z591 1439 aa14.22□□□□□ -0.13
RARB-201ENST00000330688 KDM6BO15054 1643 aa14.22□□□□□ -0.13
RARB-201ENST00000330688 GCC2Q8IWJ2 1684 aa14.2□□□□□ -0.14
RARB-201ENST00000330688 KIAA0556O60303 1618 aa14.2□□□□□ -0.14
RARB-201ENST00000330688 ANP32CO43423 234 aa14.19□□□□□ -0.14
RARB-201ENST00000330688 MPHOSPH9Q99550 1183 aa14.19□□□□□ -0.14
RARB-201ENST00000330688 NUP153P49790 1475 aaKnown RBP14.19□□□□□ -0.14
RARB-201ENST00000330688 GRIN2AQ12879 1464 aa14.19□□□□□ -0.14
RARB-201ENST00000330688 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
RARB-201ENST00000330688 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
RARB-201ENST00000330688 EIF4G3O43432 1585 aaKnown RBP14.16□□□□□ -0.14
RARB-201ENST00000330688 DAPK1P53355 1430 aa14.16□□□□□ -0.14
RARB-201ENST00000330688 FOXD1Q16676 465 aa14.16□□□□□ -0.14
RARB-201ENST00000330688 ABCC5O15440 1437 aa14.15□□□□□ -0.14
RARB-201ENST00000330688 ROCK1Q13464 1354 aa14.14□□□□□ -0.15
RARB-201ENST00000330688 RAPGEF6Q8TEU7 1601 aa14.14□□□□□ -0.15
RARB-201ENST00000330688 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
RARB-201ENST00000330688 HSPA5P11021 654 aaKnown RBP14.13□□□□□ -0.15
RARB-201ENST00000330688 CHMP7Q8WUX9 453 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms