RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 ARID3AQ99856 593 aa21.81■■□□□ 1.08
SMAD3-201ENST00000327367 GOLGA6L22H0YM25 854 aa21.78■■□□□ 1.08
SMAD3-201ENST00000327367 PLCB2Q00722 1185 aa21.77■■□□□ 1.08
SMAD3-201ENST00000327367 ZBTB7CA1YPR0 619 aa21.76■■□□□ 1.07
SMAD3-201ENST00000327367 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
SMAD3-201ENST00000327367 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
SMAD3-201ENST00000327367 FBLN2P98095 1184 aa21.72■■□□□ 1.07
SMAD3-201ENST00000327367 MYH16Q9H6N6 1097 aa21.68■■□□□ 1.06
SMAD3-201ENST00000327367 KDM2AQ9Y2K7 1162 aa21.65■■□□□ 1.06
SMAD3-201ENST00000327367 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
SMAD3-201ENST00000327367 CHIC2Q9UKJ5 165 aa21.63■■□□□ 1.05
SMAD3-201ENST00000327367 TULP1O00294 542 aaPredicted RBP21.62■■□□□ 1.05
SMAD3-201ENST00000327367 TAOK2Q9UL54 1235 aa21.62■■□□□ 1.05
SMAD3-201ENST00000327367 RGS3P49796 1198 aa21.61■■□□□ 1.05
SMAD3-201ENST00000327367 SPRYD3Q8NCJ5 442 aa21.59■■□□□ 1.05
SMAD3-201ENST00000327367 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
SMAD3-201ENST00000327367 ZRSR1Q15695 479 aaKnown RBP21.57■■□□□ 1.04
SMAD3-201ENST00000327367 PLPPR3Q6T4P5 718 aa21.57■■□□□ 1.04
SMAD3-201ENST00000327367 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
SMAD3-201ENST00000327367 SENP3Q9H4L4 574 aaPredicted RBP21.56■■□□□ 1.04
SMAD3-201ENST00000327367 RBM19Q9Y4C8 960 aaKnown RBP21.52■■□□□ 1.04
SMAD3-201ENST00000327367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.032e-7■■□□□ 12.5
SMAD3-201ENST00000327367 MSNP26038 577 aaKnown RBP21.5■■□□□ 1.03
SMAD3-201ENST00000327367 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
SMAD3-201ENST00000327367 HSP90AB1P08238 724 aaKnown RBP21.48■■□□□ 1.03
SMAD3-201ENST00000327367 PLEKHG5O94827 1062 aa21.46■■□□□ 1.03
SMAD3-201ENST00000327367 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
SMAD3-201ENST00000327367 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
SMAD3-201ENST00000327367 CHAF1AQ13111 956 aaPredicted RBP21.4■■□□□ 1.02
SMAD3-201ENST00000327367 GZF1Q9H116 711 aaPredicted RBP21.4■■□□□ 1.02
SMAD3-201ENST00000327367 L1TD1Q5T7N2 865 aaKnown RBP21.39■■□□□ 1.01
SMAD3-201ENST00000327367 CASC1Q6TDU7 716 aa21.38■■□□□ 1.01
SMAD3-201ENST00000327367 EIF4G2P78344 907 aaKnown RBP eCLIP21.38■■□□□ 1.011e-6■■■■□ 21.9
SMAD3-201ENST00000327367 FTSJ3Q8IY81 847 aaKnown RBP21.37■■□□□ 1.01
SMAD3-201ENST00000327367 A0A0G2JS52 829 aa21.36■■□□□ 1.01
SMAD3-201ENST00000327367 NEUROD2Q15784 382 aa21.36■■□□□ 1.01
SMAD3-201ENST00000327367 FRAT1Q92837 279 aaPredicted RBP21.34■■□□□ 1.01
SMAD3-201ENST00000327367 DRC7Q8IY82 874 aa21.33■■□□□ 1.01
SMAD3-201ENST00000327367 GOLGA6L6A8MZA4 724 aa21.32■■□□□ 1
SMAD3-201ENST00000327367 TNNT3P45378 269 aaPredicted RBP21.31■■□□□ 1
SMAD3-201ENST00000327367 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
SMAD3-201ENST00000327367 HSCBQ8IWL3 235 aa21.26■□□□□ 0.99
SMAD3-201ENST00000327367 VSIG10Q8N0Z9 540 aa21.25■□□□□ 0.99
SMAD3-201ENST00000327367 NAP1L2Q9ULW6 460 aaPredicted RBP21.25■□□□□ 0.99
SMAD3-201ENST00000327367 TSHZ2Q9NRE2 1034 aa21.23■□□□□ 0.99
SMAD3-201ENST00000327367 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
SMAD3-201ENST00000327367 ESF1Q9H501 851 aaKnown RBP21.22■□□□□ 0.99
SMAD3-201ENST00000327367 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.99
SMAD3-201ENST00000327367 GOLGA6L4A6NEF3 574 aa21.17■□□□□ 0.98
SMAD3-201ENST00000327367 NRDCO43847 1150 aa21.16■□□□□ 0.98
SMAD3-201ENST00000327367 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
SMAD3-201ENST00000327367 HSP90AA2PQ14568 343 aaPredicted RBP21.15■□□□□ 0.98
SMAD3-201ENST00000327367 NCBP3Q53F19 620 aaKnown RBP21.15■□□□□ 0.98
SMAD3-201ENST00000327367 FGD1P98174 961 aa21.14■□□□□ 0.97
SMAD3-201ENST00000327367 RGL3Q3MIN7 710 aa21.14■□□□□ 0.97
SMAD3-201ENST00000327367 CC2D1BQ5T0F9 858 aaKnown RBP21.13■□□□□ 0.97
SMAD3-201ENST00000327367 TIMELESSQ9UNS1 1208 aa21.12■□□□□ 0.97
SMAD3-201ENST00000327367 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
SMAD3-201ENST00000327367 KCNJ4P48050 445 aa21.1■□□□□ 0.97
SMAD3-201ENST00000327367 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.96
SMAD3-201ENST00000327367 KIAA2012Q0VF49 1180 aa21.07■□□□□ 0.96
SMAD3-201ENST00000327367 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
SMAD3-201ENST00000327367 GOLGA6L3A6NEY3 463 aa21.07■□□□□ 0.96
SMAD3-201ENST00000327367 OS9Q13438 667 aaPredicted RBP21.05■□□□□ 0.96
SMAD3-201ENST00000327367 CFAP53Q96M91 514 aa21.03■□□□□ 0.96
SMAD3-201ENST00000327367 FOXD4L1Q9NU39 408 aa21.01■□□□□ 0.95
SMAD3-201ENST00000327367 APBB1O00213 710 aa20.99■□□□□ 0.95
SMAD3-201ENST00000327367 CARD11Q9BXL7 1154 aa20.98■□□□□ 0.95
SMAD3-201ENST00000327367 MAPK8IP3Q9UPT6 1336 aa20.98■□□□□ 0.95
SMAD3-201ENST00000327367 CLSTN1O94985 981 aa20.97■□□□□ 0.95
SMAD3-201ENST00000327367 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
SMAD3-201ENST00000327367 IPO9Q96P70 1041 aaKnown RBP20.97■□□□□ 0.95
SMAD3-201ENST00000327367 GBP4Q96PP9 640 aa20.97■□□□□ 0.95
SMAD3-201ENST00000327367 MTUS2Q5JR59 1369 aa20.95■□□□□ 0.94
SMAD3-201ENST00000327367 TSPY4P0CV99 314 aa20.94■□□□□ 0.94
SMAD3-201ENST00000327367 TSPY10P0CW01 314 aa20.94■□□□□ 0.94
SMAD3-201ENST00000327367 NOC3LQ8WTT2 800 aaKnown RBP20.94■□□□□ 0.94
SMAD3-201ENST00000327367 RSPH6AQ9H0K4 717 aa20.94■□□□□ 0.94
SMAD3-201ENST00000327367 A0A0U1RQG5 324 aaPredicted RBP20.92■□□□□ 0.94
SMAD3-201ENST00000327367 PDE4CQ08493 712 aa20.92■□□□□ 0.94
SMAD3-201ENST00000327367 U2SURPO15042 1029 aaKnown RBP20.91■□□□□ 0.94
SMAD3-201ENST00000327367 SLC4A3P48751 1232 aa20.89■□□□□ 0.94
SMAD3-201ENST00000327367 MFAP1P55081 439 aaKnown RBP20.89■□□□□ 0.93
SMAD3-201ENST00000327367 MCCP23508 829 aa20.88■□□□□ 0.93
SMAD3-201ENST00000327367 FOXD4L5Q5VV16 416 aaPredicted RBP20.86■□□□□ 0.93
SMAD3-201ENST00000327367 FOXD4L4Q8WXT5 416 aaPredicted RBP20.86■□□□□ 0.93
SMAD3-201ENST00000327367 GOLGA6L1Q8N7Z2 621 aa20.85■□□□□ 0.93
SMAD3-201ENST00000327367 ZNF771Q7L3S4 317 aaPredicted RBP20.84■□□□□ 0.93
SMAD3-201ENST00000327367 NOL8Q76FK4 1167 aaKnown RBP20.84■□□□□ 0.93
SMAD3-201ENST00000327367 CLIP1P30622 1438 aa20.84■□□□□ 0.93
SMAD3-201ENST00000327367 GNL2Q13823 731 aaKnown RBP20.83■□□□□ 0.93
SMAD3-201ENST00000327367 ABCC9O60706 1549 aa20.82■□□□□ 0.92
SMAD3-201ENST00000327367 PTMSP20962 102 aa20.81■□□□□ 0.92
SMAD3-201ENST00000327367 PATL2C9JE40 543 aaKnown RBP20.8■□□□□ 0.92
SMAD3-201ENST00000327367 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
SMAD3-201ENST00000327367 PPP1R15AO75807 674 aaPredicted RBP20.79■□□□□ 0.92
SMAD3-201ENST00000327367 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
SMAD3-201ENST00000327367 MS4A1P11836 297 aa20.79■□□□□ 0.92
SMAD3-201ENST00000327367 HSP90B1P14625 803 aaKnown RBP20.77■□□□□ 0.92
SMAD3-201ENST00000327367 CALD1Q05682 793 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms