RNA–Protein interactions for RNA: ENST00000326427.10

ITM2C-202, Transcript of integral membrane protein 2C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2C, Length 2,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-202ENST00000326427 YTHDC1Q96MU7 727 aaKnown RBP32.2■■■□□ 2.75
ITM2C-202ENST00000326427 PCF11O94913 1555 aaKnown RBP32.2■■■□□ 2.74
ITM2C-202ENST00000326427 TOPBP1Q92547 1522 aa32.18■■■□□ 2.74
ITM2C-202ENST00000326427 CUL7Q14999 1698 aa32.17■■■□□ 2.74
ITM2C-202ENST00000326427 POLA1P09884 1462 aaPredicted RBP32.16■■■□□ 2.74
ITM2C-202ENST00000326427 EFCAB5A4FU69 1503 aa32.14■■■□□ 2.74
ITM2C-202ENST00000326427 RAB3GAP2Q9H2M9 1393 aa32.14■■■□□ 2.73
ITM2C-202ENST00000326427 RAD54L2Q9Y4B4 1467 aa32.12■■■□□ 2.73
ITM2C-202ENST00000326427 MAPKBP1O60336 1514 aa32.11■■■□□ 2.73
ITM2C-202ENST00000326427 CTTNBP2Q8WZ74 1663 aa32.11■■■□□ 2.73
ITM2C-202ENST00000326427 PHLDB1Q86UU1 1377 aa32.1■■■□□ 2.73
ITM2C-202ENST00000326427 FYCO1Q9BQS8 1478 aa32.08■■■□□ 2.73
ITM2C-202ENST00000326427 AQRO60306 1485 aaKnown RBP eCLIP32.06■■■□□ 2.721e-8■■■□□ 18.9
ITM2C-202ENST00000326427 SETD5Q9C0A6 1442 aa32.06■■■□□ 2.72
ITM2C-202ENST00000326427 WDR97A6NE52 1622 aa32.06■■■□□ 2.72
ITM2C-202ENST00000326427 ITGAEP38570 1179 aa32.05■■■□□ 2.72
ITM2C-202ENST00000326427 NESP48681 1621 aa32.01■■■□□ 2.72
ITM2C-202ENST00000326427 CASKIN1Q8WXD9 1431 aa32■■■□□ 2.71
ITM2C-202ENST00000326427 FHOD3Q2V2M9 1422 aa31.99■■■□□ 2.71
ITM2C-202ENST00000326427 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
ITM2C-202ENST00000326427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.93■■■□□ 2.7
ITM2C-202ENST00000326427 P3H3Q8IVL6 736 aa31.9■■■□□ 2.7
ITM2C-202ENST00000326427 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
ITM2C-202ENST00000326427 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
ITM2C-202ENST00000326427 FMN1Q68DA7 1419 aa31.86■■■□□ 2.69
ITM2C-202ENST00000326427 SNAPC4Q5SXM2 1469 aa31.85■■■□□ 2.69
ITM2C-202ENST00000326427 FAM50AQ14320 339 aaKnown RBP31.84■■■□□ 2.69
ITM2C-202ENST00000326427 SAMD9Q5K651 1589 aa31.83■■■□□ 2.69
ITM2C-202ENST00000326427 ATP1B4Q9UN42 357 aaPredicted RBP31.76■■■□□ 2.67
ITM2C-202ENST00000326427 LRRIQ1Q96JM4 1722 aa31.73■■■□□ 2.67
ITM2C-202ENST00000326427 FGD6Q6ZV73 1430 aa31.73■■■□□ 2.67
ITM2C-202ENST00000326427 TIMELESSQ9UNS1 1208 aa31.72■■■□□ 2.67
ITM2C-202ENST00000326427 THOC2Q8NI27 1593 aaKnown RBP31.72■■■□□ 2.67
ITM2C-202ENST00000326427 GAPVD1Q14C86 1478 aa31.71■■■□□ 2.67
ITM2C-202ENST00000326427 PDS5BQ9NTI5 1447 aa31.67■■■□□ 2.66
ITM2C-202ENST00000326427 KIF21AQ7Z4S6 1674 aa31.66■■■□□ 2.66
ITM2C-202ENST00000326427 GRIN2BQ13224 1484 aa31.66■■■□□ 2.66
ITM2C-202ENST00000326427 TDRD9Q8NDG6 1382 aaKnown RBP31.65■■■□□ 2.66
ITM2C-202ENST00000326427 SIN3AQ96ST3 1273 aa31.63■■■□□ 2.65
ITM2C-202ENST00000326427 MTUS2Q5JR59 1369 aa31.61■■■□□ 2.65
ITM2C-202ENST00000326427 TARBP1Q13395 1621 aaKnown RBP31.59■■■□□ 2.65
ITM2C-202ENST00000326427 SUPT6HQ7KZ85 1726 aaKnown RBP31.58■■■□□ 2.65
ITM2C-202ENST00000326427 EHBP1L1Q8N3D4 1523 aa31.56■■■□□ 2.64
ITM2C-202ENST00000326427 HFM1A2PYH4 1435 aa31.56■■■□□ 2.64
ITM2C-202ENST00000326427 NCOA2Q15596 1464 aa31.55■■■□□ 2.64
ITM2C-202ENST00000326427 PTPN23Q9H3S7 1636 aa31.55■■■□□ 2.64
ITM2C-202ENST00000326427 CCDC18Q5T9S5 1454 aa31.54■■■□□ 2.64
ITM2C-202ENST00000326427 MYOM3Q5VTT5 1437 aa31.54■■■□□ 2.64
ITM2C-202ENST00000326427 PTPRKQ15262 1439 aa31.51■■■□□ 2.64
ITM2C-202ENST00000326427 ARHGEF11O15085 1522 aa31.49■■■□□ 2.63
ITM2C-202ENST00000326427 UACAQ9BZF9 1416 aa31.49■■■□□ 2.63
ITM2C-202ENST00000326427 PBRM1Q86U86 1689 aa31.48■■■□□ 2.63
ITM2C-202ENST00000326427 PPP1R15AO75807 674 aaPredicted RBP31.48■■■□□ 2.63
ITM2C-202ENST00000326427 UGGT2Q9NYU1 1516 aa31.47■■■□□ 2.63
ITM2C-202ENST00000326427 NAIPQ13075 1403 aa31.43■■■□□ 2.62
ITM2C-202ENST00000326427 MAGI3Q5TCQ9 1506 aa31.4■■■□□ 2.62
ITM2C-202ENST00000326427 HECW1Q76N89 1606 aa31.39■■■□□ 2.62
ITM2C-202ENST00000326427 SUPT16HQ9Y5B9 1047 aaKnown RBP31.39■■■□□ 2.62
ITM2C-202ENST00000326427 ADAMTS12P58397 1594 aa31.36■■■□□ 2.61
ITM2C-202ENST00000326427 IQGAP2Q13576 1575 aa31.36■■■□□ 2.61
ITM2C-202ENST00000326427 TCOF1Q13428 1488 aaKnown RBP31.35■■■□□ 2.61
ITM2C-202ENST00000326427 DDX10Q13206 875 aaKnown RBP31.35■■■□□ 2.61
ITM2C-202ENST00000326427 KCNH8Q96L42 1107 aa31.34■■■□□ 2.61
ITM2C-202ENST00000326427 GCC2Q8IWJ2 1684 aa31.33■■■□□ 2.61
ITM2C-202ENST00000326427 TONSLQ96HA7 1378 aa31.33■■■□□ 2.61
ITM2C-202ENST00000326427 DNAJC5BQ9UF47 199 aa31.31■■■□□ 2.6
ITM2C-202ENST00000326427 EPRSP07814 1512 aaKnown RBP31.26■■■□□ 2.59
ITM2C-202ENST00000326427 AKNAQ7Z591 1439 aa31.25■■■□□ 2.59
ITM2C-202ENST00000326427 KDM5BQ9UGL1 1544 aa31.24■■■□□ 2.59
ITM2C-202ENST00000326427 WDR62O43379 1518 aa31.23■■■□□ 2.59
ITM2C-202ENST00000326427 MRC2Q9UBG0 1479 aa31.22■■■□□ 2.59
ITM2C-202ENST00000326427 CCER2I3L3R5 266 aa31.19■■■□□ 2.58
ITM2C-202ENST00000326427 MIA2Q96PC5 1412 aa31.18■■■□□ 2.58
ITM2C-202ENST00000326427 HIRIP3Q9BW71 556 aaPredicted RBP31.15■■■□□ 2.58
ITM2C-202ENST00000326427 CDK13Q14004 1512 aaKnown RBP31.14■■■□□ 2.58
ITM2C-202ENST00000326427 DENND4BO75064 1496 aaPredicted RBP31.12■■■□□ 2.57
ITM2C-202ENST00000326427 ANP32CO43423 234 aa31.09■■■□□ 2.57
ITM2C-202ENST00000326427 KDM6BO15054 1643 aa31.09■■■□□ 2.57
ITM2C-202ENST00000326427 IFT140Q96RY7 1462 aa31.06■■■□□ 2.56
ITM2C-202ENST00000326427 RRP7BPQ9NSQ0 103 aa31.05■■■□□ 2.56
ITM2C-202ENST00000326427 MYT1Q01538 1121 aa31.04■■■□□ 2.56
ITM2C-202ENST00000326427 KIAA0556O60303 1618 aa31.03■■■□□ 2.56
ITM2C-202ENST00000326427 KIAA0586Q9BVV6 1533 aa31■■■□□ 2.55
ITM2C-202ENST00000326427 CHIC2Q9UKJ5 165 aa30.99■■■□□ 2.55
ITM2C-202ENST00000326427 DISP1Q96F81 1524 aa30.98■■■□□ 2.55
ITM2C-202ENST00000326427 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
ITM2C-202ENST00000326427 DNMT1P26358 1616 aaKnown RBP30.96■■■□□ 2.55
ITM2C-202ENST00000326427 ROCK1Q13464 1354 aa30.95■■■□□ 2.55
ITM2C-202ENST00000326427 RAPGEF6Q8TEU7 1601 aa30.93■■■□□ 2.54
ITM2C-202ENST00000326427 DAPK1P53355 1430 aa30.92■■■□□ 2.54
ITM2C-202ENST00000326427 NUP153P49790 1475 aaKnown RBP30.91■■■□□ 2.54
ITM2C-202ENST00000326427 TRIM52Q96A61 297 aa30.9■■■□□ 2.54
ITM2C-202ENST00000326427 MPHOSPH9Q99550 1183 aa30.89■■■□□ 2.54
ITM2C-202ENST00000326427 GRIN2AQ12879 1464 aa30.88■■■□□ 2.53
ITM2C-202ENST00000326427 EIF4G3O43432 1585 aaKnown RBP30.86■■■□□ 2.53
ITM2C-202ENST00000326427 ABCC5O15440 1437 aa30.85■■■□□ 2.53
ITM2C-202ENST00000326427 TSHZ2Q9NRE2 1034 aa30.83■■■□□ 2.53
ITM2C-202ENST00000326427 HSPA5P11021 654 aaKnown RBP30.82■■■□□ 2.52
ITM2C-202ENST00000326427 FKBP8Q14318 412 aa30.8■■■□□ 2.52
ITM2C-202ENST00000326427 WASHC2AQ641Q2 1341 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms