RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 SALL2Q9Y467 1007 aaPredicted RBP23.89■■□□□ 1.42
ARID1A-201ENST00000324856 TNNT3P45378 269 aaPredicted RBP23.88■■□□□ 1.41
ARID1A-201ENST00000324856 PPP4R2Q9NY27 417 aa23.84■■□□□ 1.41
ARID1A-201ENST00000324856 IRX6P78412 446 aaPredicted RBP23.84■■□□□ 1.41
ARID1A-201ENST00000324856 CHMP4BQ9H444 224 aaKnown RBP23.8■■□□□ 1.4
ARID1A-201ENST00000324856 LAS1LQ9Y4W2 734 aaKnown RBP23.79■■□□□ 1.4
ARID1A-201ENST00000324856 PNNQ9H307 717 aaKnown RBP23.77■■□□□ 1.4
ARID1A-201ENST00000324856 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
ARID1A-201ENST00000324856 HSP90AB1P08238 724 aaKnown RBP23.76■■□□□ 1.39
ARID1A-201ENST00000324856 USP35Q9P2H5 1018 aa23.75■■□□□ 1.39
ARID1A-201ENST00000324856 CFAP44Q96MT7 982 aa23.75■■□□□ 1.39
ARID1A-201ENST00000324856 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
ARID1A-201ENST00000324856 KIAA2012Q0VF49 1180 aa23.73■■□□□ 1.39
ARID1A-201ENST00000324856 PLCB2Q00722 1185 aa23.71■■□□□ 1.39
ARID1A-201ENST00000324856 HSCBQ8IWL3 235 aa23.7■■□□□ 1.38
ARID1A-201ENST00000324856 RSPH6AQ9H0K4 717 aa23.7■■□□□ 1.38
ARID1A-201ENST00000324856 SUPT16HQ9Y5B9 1047 aaKnown RBP23.69■■□□□ 1.38
ARID1A-201ENST00000324856 AMER1Q5JTC6 1135 aaPredicted RBP23.69■■□□□ 1.38
ARID1A-201ENST00000324856 CSRNP3Q8WYN3 585 aa23.68■■□□□ 1.38
ARID1A-201ENST00000324856 MS4A1P11836 297 aa23.66■■□□□ 1.38
ARID1A-201ENST00000324856 ARID4BQ4LE39 1312 aaPredicted RBP23.66■■□□□ 1.38
ARID1A-201ENST00000324856 HSP90AA2PQ14568 343 aaPredicted RBP23.64■■□□□ 1.37
ARID1A-201ENST00000324856 GOLGA6L4A6NEF3 574 aa23.63■■□□□ 1.37
ARID1A-201ENST00000324856 DRC7Q8IY82 874 aa23.63■■□□□ 1.37
ARID1A-201ENST00000324856 GOLGA6L1Q8N7Z2 621 aa23.62■■□□□ 1.37
ARID1A-201ENST00000324856 GBP4Q96PP9 640 aa23.6■■□□□ 1.37
ARID1A-201ENST00000324856 SYAP1Q96A49 352 aaPredicted RBP23.58■■□□□ 1.37
ARID1A-201ENST00000324856 SETQ01105 290 aaPredicted RBP23.55■■□□□ 1.36
ARID1A-201ENST00000324856 CDCA8Q53HL2 280 aa23.55■■□□□ 1.36
ARID1A-201ENST00000324856 ZNF777Q9ULD5 760 aaPredicted RBP23.55■■□□□ 1.36
ARID1A-201ENST00000324856 ESF1Q9H501 851 aaKnown RBP23.54■■□□□ 1.36
ARID1A-201ENST00000324856 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
ARID1A-201ENST00000324856 RBM19Q9Y4C8 960 aaKnown RBP23.53■■□□□ 1.36
ARID1A-201ENST00000324856 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
ARID1A-201ENST00000324856 MCCP23508 829 aa23.51■■□□□ 1.35
ARID1A-201ENST00000324856 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.51■■□□□ 1.35
ARID1A-201ENST00000324856 CALRP27797 417 aaKnown RBP23.48■■□□□ 1.35
ARID1A-201ENST00000324856 FGD1P98174 961 aa23.47■■□□□ 1.35
ARID1A-201ENST00000324856 RGS3P49796 1198 aa23.45■■□□□ 1.34
ARID1A-201ENST00000324856 NOC3LQ8WTT2 800 aaKnown RBP23.45■■□□□ 1.34
ARID1A-201ENST00000324856 KNSTRNQ9Y448 316 aa23.44■■□□□ 1.34
ARID1A-201ENST00000324856 PHF14O94880 888 aa23.43■■□□□ 1.34
ARID1A-201ENST00000324856 TPRNQ4KMQ1 711 aa23.41■■□□□ 1.34
ARID1A-201ENST00000324856 GOLGA6L3A6NEY3 463 aa23.4■■□□□ 1.34
ARID1A-201ENST00000324856 KCNJ4P48050 445 aa23.38■■□□□ 1.33
ARID1A-201ENST00000324856 HTATSF1O43719 755 aaKnown RBP23.37■■□□□ 1.33
ARID1A-201ENST00000324856 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
ARID1A-201ENST00000324856 CHGAP10645 457 aaKnown RBP23.36■■□□□ 1.33
ARID1A-201ENST00000324856 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
ARID1A-201ENST00000324856 B4GALNT3Q6L9W6 998 aa23.34■■□□□ 1.33
ARID1A-201ENST00000324856 TPM4P67936 248 aa23.33■■□□□ 1.33
ARID1A-201ENST00000324856 FBLN2P98095 1184 aa23.33■■□□□ 1.32
ARID1A-201ENST00000324856 CCDC34Q96HJ3 373 aa23.3■■□□□ 1.32
ARID1A-201ENST00000324856 CSPP1Q1MSJ5 1256 aa23.29■■□□□ 1.32
ARID1A-201ENST00000324856 TCERG1O14776 1098 aaKnown RBP23.29■■□□□ 1.32
ARID1A-201ENST00000324856 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
ARID1A-201ENST00000324856 A0A0U1RQG5 324 aaPredicted RBP23.28■■□□□ 1.32
ARID1A-201ENST00000324856 CLIP1P30622 1438 aa23.28■■□□□ 1.32
ARID1A-201ENST00000324856 IPO9Q96P70 1041 aaKnown RBP23.28■■□□□ 1.32
ARID1A-201ENST00000324856 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
ARID1A-201ENST00000324856 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
ARID1A-201ENST00000324856 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
ARID1A-201ENST00000324856 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
ARID1A-201ENST00000324856 CCER2I3L3R5 266 aa23.25■■□□□ 1.31
ARID1A-201ENST00000324856 GPS2Q13227 327 aa23.24■■□□□ 1.31
ARID1A-201ENST00000324856 ARID3AQ99856 593 aa23.24■■□□□ 1.31
ARID1A-201ENST00000324856 VSIG10Q8N0Z9 540 aa23.24■■□□□ 1.31
ARID1A-201ENST00000324856 HAP1P54257 671 aaPredicted RBP23.22■■□□□ 1.31
ARID1A-201ENST00000324856 EEA1Q15075 1411 aa23.22■■□□□ 1.31
ARID1A-201ENST00000324856 NUDCQ9Y266 331 aa23.21■■□□□ 1.31
ARID1A-201ENST00000324856 DDX11L8A8MPP1 907 aa23.2■■□□□ 1.3
ARID1A-201ENST00000324856 GNL2Q13823 731 aaKnown RBP23.2■■□□□ 1.3
ARID1A-201ENST00000324856 GZF1Q9H116 711 aaPredicted RBP23.19■■□□□ 1.3
ARID1A-201ENST00000324856 MTERF4Q7Z6M4 381 aaKnown RBP23.18■■□□□ 1.3
ARID1A-201ENST00000324856 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
ARID1A-201ENST00000324856 FRAT1Q92837 279 aaPredicted RBP23.18■■□□□ 1.3
ARID1A-201ENST00000324856 OS9Q13438 667 aaPredicted RBP23.18■■□□□ 1.3
ARID1A-201ENST00000324856 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
ARID1A-201ENST00000324856 KIAA1211Q6ZU35 1233 aa23.17■■□□□ 1.3
ARID1A-201ENST00000324856 TEX35Q5T0J7 233 aa23.16■■□□□ 1.3
ARID1A-201ENST00000324856 NAP1L2Q9ULW6 460 aaPredicted RBP23.15■■□□□ 1.3
ARID1A-201ENST00000324856 NOM1Q5C9Z4 860 aaKnown RBP23.15■■□□□ 1.3
ARID1A-201ENST00000324856 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
ARID1A-201ENST00000324856 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
ARID1A-201ENST00000324856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.14■■□□□ 1.29
ARID1A-201ENST00000324856 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
ARID1A-201ENST00000324856 TULP1O00294 542 aaPredicted RBP23.13■■□□□ 1.29
ARID1A-201ENST00000324856 CHIC2Q9UKJ5 165 aa23.13■■□□□ 1.29
ARID1A-201ENST00000324856 ZNF771Q7L3S4 317 aaPredicted RBP23.11■■□□□ 1.29
ARID1A-201ENST00000324856 SKOR2Q2VWA4 1001 aaPredicted RBP23.08■■□□□ 1.29
ARID1A-201ENST00000324856 MAP7D2Q96T17 732 aa23.08■■□□□ 1.29
ARID1A-201ENST00000324856 SPRYD3Q8NCJ5 442 aa23.07■■□□□ 1.28
ARID1A-201ENST00000324856 GSE1Q14687 1217 aa23.07■■□□□ 1.28
ARID1A-201ENST00000324856 CCDC70Q6NSX1 233 aa23.07■■□□□ 1.28
ARID1A-201ENST00000324856 IPO8O15397 1037 aaKnown RBP23.06■■□□□ 1.28
ARID1A-201ENST00000324856 KAT6BQ8WYB5 2073 aa23.06■■□□□ 1.28
ARID1A-201ENST00000324856 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
ARID1A-201ENST00000324856 GOLGA2Q08379 1002 aa23.06■■□□□ 1.28
ARID1A-201ENST00000324856 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
ARID1A-201ENST00000324856 TPM3P06753 285 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms