RNA–Protein interactions for RNA: ENST00000323434.12

RPH3AL-201, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 1 (best) BASIC

Gene RPH3AL, Length 2,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-201ENST00000323434 DHX57Q6P158 1386 aaKnown RBP22.43■■□□□ 1.18
RPH3AL-201ENST00000323434 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
RPH3AL-201ENST00000323434 ABCA10Q8WWZ4 1543 aa22.37■■□□□ 1.17
RPH3AL-201ENST00000323434 TIAM1Q13009 1591 aa22.34■■□□□ 1.17
RPH3AL-201ENST00000323434 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
RPH3AL-201ENST00000323434 FHOD3Q2V2M9 1422 aa22.32■■□□□ 1.16
RPH3AL-201ENST00000323434 FHAD1B1AJZ9 1412 aa22.3■■□□□ 1.16
RPH3AL-201ENST00000323434 LRRC9Q6ZRR7 1453 aa22.29■■□□□ 1.16
RPH3AL-201ENST00000323434 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
RPH3AL-201ENST00000323434 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
RPH3AL-201ENST00000323434 FAM50AQ14320 339 aaKnown RBP22.29■■□□□ 1.16
RPH3AL-201ENST00000323434 PHLDB1Q86UU1 1377 aa22.26■■□□□ 1.15
RPH3AL-201ENST00000323434 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
RPH3AL-201ENST00000323434 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
RPH3AL-201ENST00000323434 PCF11O94913 1555 aaKnown RBP22.25■■□□□ 1.15
RPH3AL-201ENST00000323434 MYT1Q01538 1121 aa22.23■■□□□ 1.15
RPH3AL-201ENST00000323434 RAB3GAP2Q9H2M9 1393 aa22.22■■□□□ 1.15
RPH3AL-201ENST00000323434 PDS5BQ9NTI5 1447 aa22.2■■□□□ 1.14
RPH3AL-201ENST00000323434 CUL7Q14999 1698 aa22.19■■□□□ 1.14
RPH3AL-201ENST00000323434 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.14
RPH3AL-201ENST00000323434 EFCAB5A4FU69 1503 aa22.14■■□□□ 1.14
RPH3AL-201ENST00000323434 CASKIN1Q8WXD9 1431 aa22.13■■□□□ 1.13
RPH3AL-201ENST00000323434 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
RPH3AL-201ENST00000323434 SETD5Q9C0A6 1442 aa22.12■■□□□ 1.13
RPH3AL-201ENST00000323434 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
RPH3AL-201ENST00000323434 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
RPH3AL-201ENST00000323434 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
RPH3AL-201ENST00000323434 FMN1Q68DA7 1419 aa22.08■■□□□ 1.13
RPH3AL-201ENST00000323434 ABCA5Q8WWZ7 1642 aa22.07■■□□□ 1.12
RPH3AL-201ENST00000323434 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
RPH3AL-201ENST00000323434 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.12
RPH3AL-201ENST00000323434 MTUS2Q5JR59 1369 aa22.03■■□□□ 1.12
RPH3AL-201ENST00000323434 MAPKBP1O60336 1514 aa22.03■■□□□ 1.12
RPH3AL-201ENST00000323434 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.11
RPH3AL-201ENST00000323434 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
RPH3AL-201ENST00000323434 SUPT16HQ9Y5B9 1047 aaKnown RBP22■■□□□ 1.11
RPH3AL-201ENST00000323434 FGD6Q6ZV73 1430 aa21.94■■□□□ 1.1
RPH3AL-201ENST00000323434 TARBP1Q13395 1621 aaKnown RBP21.94■■□□□ 1.1
RPH3AL-201ENST00000323434 SAMD9Q5K651 1589 aa21.94■■□□□ 1.1
RPH3AL-201ENST00000323434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.093e-7■■■■□ 26
RPH3AL-201ENST00000323434 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
RPH3AL-201ENST00000323434 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
RPH3AL-201ENST00000323434 NCOA2Q15596 1464 aa21.86■■□□□ 1.09
RPH3AL-201ENST00000323434 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
RPH3AL-201ENST00000323434 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
RPH3AL-201ENST00000323434 PTPRKQ15262 1439 aa21.84■■□□□ 1.09
RPH3AL-201ENST00000323434 KCNH8Q96L42 1107 aa21.83■■□□□ 1.08
RPH3AL-201ENST00000323434 MYOM3Q5VTT5 1437 aa21.82■■□□□ 1.08
RPH3AL-201ENST00000323434 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
RPH3AL-201ENST00000323434 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
RPH3AL-201ENST00000323434 HIRIP3Q9BW71 556 aaPredicted RBP21.78■■□□□ 1.08
RPH3AL-201ENST00000323434 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
RPH3AL-201ENST00000323434 IQGAP2Q13576 1575 aa21.77■■□□□ 1.08
RPH3AL-201ENST00000323434 CHIC2Q9UKJ5 165 aa21.77■■□□□ 1.08
RPH3AL-201ENST00000323434 MAGI3Q5TCQ9 1506 aa21.76■■□□□ 1.07
RPH3AL-201ENST00000323434 EHBP1L1Q8N3D4 1523 aa21.76■■□□□ 1.07
RPH3AL-201ENST00000323434 SUPT6HQ7KZ85 1726 aaKnown RBP21.76■■□□□ 1.07
RPH3AL-201ENST00000323434 ADAMTS12P58397 1594 aa21.76■■□□□ 1.07
RPH3AL-201ENST00000323434 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
RPH3AL-201ENST00000323434 HFM1A2PYH4 1435 aa21.75■■□□□ 1.07
RPH3AL-201ENST00000323434 RRP7BPQ9NSQ0 103 aa21.74■■□□□ 1.07
RPH3AL-201ENST00000323434 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
RPH3AL-201ENST00000323434 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
RPH3AL-201ENST00000323434 DDX10Q13206 875 aaKnown RBP21.73■■□□□ 1.07
RPH3AL-201ENST00000323434 TIMELESSQ9UNS1 1208 aa21.73■■□□□ 1.07
RPH3AL-201ENST00000323434 NAIPQ13075 1403 aa21.71■■□□□ 1.07
RPH3AL-201ENST00000323434 UGGT2Q9NYU1 1516 aa21.7■■□□□ 1.06
RPH3AL-201ENST00000323434 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
RPH3AL-201ENST00000323434 CDK13Q14004 1512 aaKnown RBP21.7■■□□□ 1.06
RPH3AL-201ENST00000323434 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
RPH3AL-201ENST00000323434 EPRSP07814 1512 aaKnown RBP21.69■■□□□ 1.06
RPH3AL-201ENST00000323434 UACAQ9BZF9 1416 aa21.69■■□□□ 1.06
RPH3AL-201ENST00000323434 IFT140Q96RY7 1462 aa21.68■■□□□ 1.06
RPH3AL-201ENST00000323434 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
RPH3AL-201ENST00000323434 ARHGEF11O15085 1522 aa21.64■■□□□ 1.06
RPH3AL-201ENST00000323434 TRIM52Q96A61 297 aa21.64■■□□□ 1.05
RPH3AL-201ENST00000323434 WDR62O43379 1518 aa21.61■■□□□ 1.05
RPH3AL-201ENST00000323434 ERCC6Q03468 1493 aa21.61■■□□□ 1.05
RPH3AL-201ENST00000323434 FBLN2P98095 1184 aa21.61■■□□□ 1.05
RPH3AL-201ENST00000323434 KIAA0586Q9BVV6 1533 aa21.58■■□□□ 1.05
RPH3AL-201ENST00000323434 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
RPH3AL-201ENST00000323434 TCOF1Q13428 1488 aaKnown RBP21.56■■□□□ 1.04
RPH3AL-201ENST00000323434 DISP1Q96F81 1524 aa21.55■■□□□ 1.04
RPH3AL-201ENST00000323434 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
RPH3AL-201ENST00000323434 BCANQ96GW7 911 aa21.54■■□□□ 1.04
RPH3AL-201ENST00000323434 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
RPH3AL-201ENST00000323434 MIA2Q96PC5 1412 aa21.52■■□□□ 1.04
RPH3AL-201ENST00000323434 KIAA0556O60303 1618 aa21.52■■□□□ 1.04
RPH3AL-201ENST00000323434 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.04
RPH3AL-201ENST00000323434 FKBP8Q14318 412 aa21.52■■□□□ 1.04
RPH3AL-201ENST00000323434 FOXD1Q16676 465 aa21.5■■□□□ 1.03
RPH3AL-201ENST00000323434 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
RPH3AL-201ENST00000323434 KDM6BO15054 1643 aa21.49■■□□□ 1.03
RPH3AL-201ENST00000323434 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
RPH3AL-201ENST00000323434 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
RPH3AL-201ENST00000323434 ANP32CO43423 234 aa21.45■■□□□ 1.02
RPH3AL-201ENST00000323434 CCER2I3L3R5 266 aa21.45■■□□□ 1.02
RPH3AL-201ENST00000323434 ANP32EQ9BTT0 268 aa21.44■■□□□ 1.02
RPH3AL-201ENST00000323434 DENND4BO75064 1496 aaPredicted RBP21.44■■□□□ 1.02
RPH3AL-201ENST00000323434 GCC2Q8IWJ2 1684 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms